Literature DB >> 28457845

The evolution of lipidomics through space and time.

Richard W Gross1.   

Abstract

Although the foundations of mass spectrometry-based lipidomics have been practiced for over 30 years, recent technological advances in ionization modalities in conjunction with robust increases in mass accuracy and resolution have greatly accelerated the emergence, growth and importance of the field of lipidomics. Moreover, advances in the separation sciences, bioinformatic strategies and the availability of robust databases have been synergistically integrated into modern lipidomic technologies leading to unprecedented improvements in the depth, penetrance and precision of lipidomic analyses and identification of their biological and mechanistic significance. The purpose of this "opinion" article is to briefly review the evolution of lipidomics, critique the platforms that have evolved and identify areas that are likely to emerge in the years to come. Through seamlessly integrating a rich repertoire of mass spectrometric, chemical and bioinformatic strategies, the chemical identities and quantities of tens of thousands to hundreds of thousands of different lipid molecular species and their metabolic alterations during physiologic or pathophysiologic perturbations can be obtained. Thus, the field of lipidomics which already has a distinguished history of exciting new discoveries in many disease states holds unparalleled potential to identify the pleiotropic roles of lipids in health and disease at the chemical level. This article is part of a Special Issue entitled: BBALIP_Lipidomics Opinion Articles edited by Sepp Kohlwein.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Charge-switch derivatives; Lipidomics; Mass spectrometry; Reverse lipidomics; Shotgun lipidomics

Mesh:

Substances:

Year:  2017        PMID: 28457845      PMCID: PMC5501277          DOI: 10.1016/j.bbalip.2017.04.006

Source DB:  PubMed          Journal:  Biochim Biophys Acta Mol Cell Biol Lipids        ISSN: 1388-1981            Impact factor:   4.698


  44 in total

1.  Structural Elucidation of cis/trans Dicaffeoylquinic Acid Photoisomerization Using Ion Mobility Spectrometry-Mass Spectrometry.

Authors:  Xueyun Zheng; Ryan S Renslow; Mpho M Makola; Ian K Webb; Liulin Deng; Dennis G Thomas; Niranjan Govind; Yehia M Ibrahim; Mwadham M Kabanda; Ian A Dubery; Heino M Heyman; Richard D Smith; Ntakadzeni E Madala; Erin S Baker
Journal:  J Phys Chem Lett       Date:  2017-03-15       Impact factor: 6.475

Review 2.  Shotgun lipidomics: electrospray ionization mass spectrometric analysis and quantitation of cellular lipidomes directly from crude extracts of biological samples.

Authors:  Xianlin Han; Richard W Gross
Journal:  Mass Spectrom Rev       Date:  2005 May-Jun       Impact factor: 10.946

3.  Augmentation of cardiac phospholipase activity induced with negative liposomes.

Authors:  R W Gross; B E Sobel
Journal:  Trans Assoc Am Physicians       Date:  1979

4.  Shotgun Lipidomics Approach to Stabilize the Regiospecificity of Monoglycerides Using a Facile Low-Temperature Derivatization Enabling Their Definitive Identification and Quantitation.

Authors:  Kui Yang; Beverly G Dilthey; Richard W Gross
Journal:  Anal Chem       Date:  2016-09-26       Impact factor: 6.986

5.  Oxidized fatty acid analysis by charge-switch derivatization, selected reaction monitoring, and accurate mass quantitation.

Authors:  Xinping Liu; Sung Ho Moon; David J Mancuso; Christopher M Jenkins; Shaoping Guan; Harold F Sims; Richard W Gross
Journal:  Anal Biochem       Date:  2013-07-11       Impact factor: 3.365

6.  Quantitative analysis of biological membrane lipids at the low picomole level by nano-electrospray ionization tandem mass spectrometry.

Authors:  B Brügger; G Erben; R Sandhoff; F T Wieland; W D Lehmann
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

7.  High plasmalogen and arachidonic acid content of canine myocardial sarcolemma: a fast atom bombardment mass spectroscopic and gas chromatography-mass spectroscopic characterization.

Authors:  R W Gross
Journal:  Biochemistry       Date:  1984-01-03       Impact factor: 3.162

8.  Electrospray ionization mass spectroscopic analysis of human erythrocyte plasma membrane phospholipids.

Authors:  X Han; R W Gross
Journal:  Proc Natl Acad Sci U S A       Date:  1994-10-25       Impact factor: 11.205

9.  Alterations in individual molecular species of human platelet phospholipids during thrombin stimulation: electrospray ionization mass spectrometry-facilitated identification of the boundary conditions for the magnitude and selectivity of thrombin-induced platelet phospholipid hydrolysis.

Authors:  X Han; R A Gubitosi-Klug; B J Collins; R W Gross
Journal:  Biochemistry       Date:  1996-05-07       Impact factor: 3.162

10.  Defining and Detecting Complex Peak Relationships in Mass Spectral Data: The Mz.unity Algorithm.

Authors:  Nathaniel G Mahieu; Jonathan L Spalding; Susan J Gelman; Gary J Patti
Journal:  Anal Chem       Date:  2016-08-31       Impact factor: 6.986

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  11 in total

Review 1.  The role of lipids in α-synuclein misfolding and neurotoxicity.

Authors:  Cathryn L Ugalde; Victoria A Lawson; David I Finkelstein; Andrew F Hill
Journal:  J Biol Chem       Date:  2019-05-07       Impact factor: 5.157

Review 2.  Chemical Discovery in the Era of Metabolomics.

Authors:  Miriam Sindelar; Gary J Patti
Journal:  J Am Chem Soc       Date:  2020-05-11       Impact factor: 15.419

3.  Untargeted metabolomics identifies trimethyllysine, a TMAO-producing nutrient precursor, as a predictor of incident cardiovascular disease risk.

Authors:  Xinmin S Li; Zeneng Wang; Tomas Cajka; Jennifer A Buffa; Ina Nemet; Alex G Hurd; Xiaodong Gu; Sarah M Skye; Adam B Roberts; Yuping Wu; Lin Li; Christopher J Shahen; Matthew A Wagner; Jaana A Hartiala; Robert L Kerby; Kymberleigh A Romano; Yi Han; Slayman Obeid; Thomas F Lüscher; Hooman Allayee; Federico E Rey; Joseph A DiDonato; Oliver Fiehn; W H Wilson Tang; Stanley L Hazen
Journal:  JCI Insight       Date:  2018-03-22

4.  Mapping Protein Targets of Bioactive Small Molecules Using Lipid-Based Chemical Proteomics.

Authors:  Kenneth M Lum; Yoshiaki Sato; Brittney A Beyer; Warren C Plaisted; Justin L Anglin; Luke L Lairson; Benjamin F Cravatt
Journal:  ACS Chem Biol       Date:  2017-09-20       Impact factor: 5.100

5.  Enhancing the Signal-to-Noise of Diagnostic Fragment Ions of Unsaturated Glycerophospholipids via Precursor Exclusion Ultraviolet Photodissociation Mass Spectrometry (PEx-UVPD-MS).

Authors:  Samuel W J Shields; James D Sanders; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2022-08-02       Impact factor: 8.008

6.  Profiling and quantification of aminophospholipids based on chemical derivatization coupled with HPLC-MS.

Authors:  Hui-Fang Ma; Fang Wei; Bang-Fu Wu; Chen Yang; Ya Xie; Zong-Yuan Wu; Xin Lv; Hong Chen
Journal:  J Lipid Res       Date:  2018-11-27       Impact factor: 5.922

7.  Localization of Double Bonds in Bacterial Glycerophospholipids Using 193 nm Ultraviolet Photodissociation in the Negative Mode.

Authors:  Dustin R Klein; Molly S Blevins; Luis A Macias; Martin V Douglass; M Stephen Trent; Jennifer S Brodbelt
Journal:  Anal Chem       Date:  2020-04-07       Impact factor: 6.986

8.  Multiple reaction monitoring profiling as an analytical strategy to investigate lipids in extracellular vesicles.

Authors:  Madison E Edwards; Thomas De Luca; Christina R Ferreira; Kimberly S Collins; Michael T Eadon; Eric A Benson; Tiago J P Sobreira; Robert Graham Cooks
Journal:  J Mass Spectrom       Date:  2020-11-18       Impact factor: 1.982

Review 9.  Isoprostanoids in Clinical and Experimental Neurological Disease Models.

Authors:  Cinzia Signorini; Claudio De Felice; Jean-Marie Galano; Camille Oger; Silvia Leoncini; Alessio Cortelazzo; Lucia Ciccoli; Thierry Durand; Joussef Hayek; Jetty Chung-Yung Lee
Journal:  Antioxidants (Basel)       Date:  2018-07-11

10.  Plasma lipidomics of monozygotic twins discordant for multiple sclerosis.

Authors:  Horst Penkert; Chris Lauber; Mathias J Gerl; Christian Klose; Markus Damm; Dirk Fitzner; Andrea Flierl-Hecht; Tania Kümpfel; Martin Kerschensteiner; Reinhard Hohlfeld; Lisa A Gerdes; Mikael Simons
Journal:  Ann Clin Transl Neurol       Date:  2020-11-07       Impact factor: 5.430

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