Literature DB >> 28450239

An Evolutionary Search Algorithm for Covariate Models in Population Pharmacokinetic Analysis.

Fumiyoshi Yamashita1, Atsuto Fujita2, Yukako Sasa2, Yuriko Higuchi2, Masahiro Tsuda2, Mitsuru Hashida3.   

Abstract

Building a covariate model is a crucial task in population pharmacokinetics. This study develops a novel method for automated covariate modeling based on gene expression programming (GEP), which not only enables covariate selection, but also the construction of nonpolynomial relationships between pharmacokinetic parameters and covariates. To apply GEP to the extended nonlinear least squares analysis, the parameter consolidation and initial parameter value estimation algorithms were further developed and implemented. The entire program was coded in Java. The performance of the developed covariate model was evaluated for the population pharmacokinetic data of tobramycin. In comparison with the established covariate model, goodness-of-fit of the measured data was greatly improved by using only 2 additional adjustable parameters. Ten test runs yielded the same solution. In conclusion, the systematic exploration method is a potentially powerful tool for prescreening covariate models in population pharmacokinetic analysis.
Copyright © 2017 American Pharmacists Association®. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  automatic modeling; covariate models; gene expression programming; genetic algorithm; population pharmacokinetics

Mesh:

Year:  2017        PMID: 28450239     DOI: 10.1016/j.xphs.2017.04.029

Source DB:  PubMed          Journal:  J Pharm Sci        ISSN: 0022-3549            Impact factor:   3.534


  5 in total

1.  The future of antimicrobial dosing in the ICU: an opportunity for data science.

Authors:  Thomas De Corte; Paul Elbers; Jan De Waele
Journal:  Intensive Care Med       Date:  2021-10-11       Impact factor: 17.440

Review 2.  Recent applications of quantitative systems pharmacology and machine learning models across diseases.

Authors:  Sara Sadat Aghamiri; Rada Amin; Tomáš Helikar
Journal:  J Pharmacokinet Pharmacodyn       Date:  2021-10-20       Impact factor: 2.410

3.  An artificial neural network-pharmacokinetic model and its interpretation using Shapley additive explanations.

Authors:  Chika Ogami; Yasuhiro Tsuji; Hiroto Seki; Hideaki Kawano; Hideto To; Yoshiaki Matsumoto; Hiroyuki Hosono
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2021-05-27

4.  Machine Learning in Drug Discovery and Development Part 1: A Primer.

Authors:  Alan Talevi; Juan Francisco Morales; Gregory Hather; Jagdeep T Podichetty; Sarah Kim; Peter C Bloomingdale; Samuel Kim; Jackson Burton; Joshua D Brown; Almut G Winterstein; Stephan Schmidt; Jensen Kael White; Daniela J Conrado
Journal:  CPT Pharmacometrics Syst Pharmacol       Date:  2020-03-11

5.  An automated approach to identify scientific publications reporting pharmacokinetic parameters.

Authors:  Ferran Gonzalez Hernandez; Simon J Carter; Juha Iso-Sipilä; Paul Goldsmith; Ahmed A Almousa; Silke Gastine; Watjana Lilaonitkul; Frank Kloprogge; Joseph F Standing
Journal:  Wellcome Open Res       Date:  2021-04-21
  5 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.