Literature DB >> 28441029

Variable Susceptibility to Cigarette Smoke-Induced Emphysema in 34 Inbred Strains of Mice Implicates Abi3bp in Emphysema Susceptibility.

Josiah E Radder1, Alyssa D Gregory1, Adriana S Leme1, Michael H Cho2,3, Yanxia Chu1, Neil J Kelly1, Per Bakke4, Amund Gulsvik4, Augusto A Litonjua2,3, David Sparrow5,6,7, Terri H Beaty8, James D Crapo9, Edwin K Silverman2,3, Yingze Zhang1, Annerose Berndt1, Steven D Shapiro1.   

Abstract

Chronic obstructive pulmonary disease (COPD) is caused by a complex interaction of environmental exposures, most commonly cigarette smoke, and genetic factors. Chronic cigarette smoke exposure in the mouse is a commonly used animal model of COPD. We aimed to expand our knowledge about the variable susceptibility of inbred strains to this model and test for genetic variants associated with this trait. To that end, we sought to measure differential susceptibility to cigarette smoke-induced emphysema in the mouse, identify genetic loci associated with this quantitative trait, and find homologous human genes associated with COPD. Alveolar chord length (CL) in 34 inbred strains of mice was measured after 6 months of exposure to cigarette smoke. After testing for association, we connected a murine candidate locus to a published meta-analysis of moderate-to-severe COPD. We identified deleterious mutations in a candidate gene in silico and measured gene expression in extreme strains. A/J was the most susceptible strain in our survey (Δ CL 7.0 ± 2.2 μm) and CBA/J was the least susceptible (Δ CL -0.3 ± 1.2 μm). By integrating mouse and human genome-wide scans, we identified the candidate gene Abi3bp. CBA/J mice harbor predicted deleterious variants in Abi3bp, and expression of the gene differs significantly between CBA/J and A/J mice. This is the first report of susceptibility to cigarette smoke-induced emphysema in 34 inbred strains of mice, and Abi3bp is identified as a potential contributor to this phenotype.

Entities:  

Keywords:  Abi3bp; COPD; animal model; emphysema

Mesh:

Substances:

Year:  2017        PMID: 28441029      PMCID: PMC5625220          DOI: 10.1165/rcmb.2016-0220OC

Source DB:  PubMed          Journal:  Am J Respir Cell Mol Biol        ISSN: 1044-1549            Impact factor:   6.914


  37 in total

Review 1.  Chronic obstructive pulmonary disease * 3: Experimental animal models of pulmonary emphysema.

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Journal:  Thorax       Date:  2002-10       Impact factor: 9.139

2.  Mouse Genome-Wide Association Study of Preclinical Group II Pulmonary Hypertension Identifies Epidermal Growth Factor Receptor.

Authors:  Neil J Kelly; Josiah E Radder; Jeffrey J Baust; Christine L Burton; Yen-Chun Lai; Karin C Potoka; Brittani A Agostini; John P Wood; Timothy N Bachman; Rebecca R Vanderpool; Nadine Dandachi; Adriana S Leme; Alyssa D Gregory; Alison Morris; Ana L Mora; Mark T Gladwin; Steven D Shapiro
Journal:  Am J Respir Cell Mol Biol       Date:  2017-04       Impact factor: 6.914

3.  Evaluating the heritability explained by known susceptibility variants: a survey of ten complex diseases.

Authors:  Hon-Cheong So; Allen H S Gui; Stacey S Cherny; Pak C Sham
Journal:  Genet Epidemiol       Date:  2011-03-03       Impact factor: 2.135

4.  Multiple testing corrections for imputed SNPs.

Authors:  Xiaoyi Gao
Journal:  Genet Epidemiol       Date:  2011-01-19       Impact factor: 2.135

5.  Genome-wide study of percent emphysema on computed tomography in the general population. The Multi-Ethnic Study of Atherosclerosis Lung/SNP Health Association Resource Study.

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Journal:  Am J Respir Crit Care Med       Date:  2014-02-15       Impact factor: 21.405

6.  Common SNPs explain a large proportion of the heritability for human height.

Authors:  Jian Yang; Beben Benyamin; Brian P McEvoy; Scott Gordon; Anjali K Henders; Dale R Nyholt; Pamela A Madden; Andrew C Heath; Nicholas G Martin; Grant W Montgomery; Michael E Goddard; Peter M Visscher
Journal:  Nat Genet       Date:  2010-06-20       Impact factor: 38.330

7.  Abi3bp regulates cardiac progenitor cell proliferation and differentiation.

Authors:  Conrad P Hodgkinson; Jose A Gomez; Alan J Payne; Lunan Zhang; Xiaowen Wang; Sophie Dal-Pra; Richard E Pratt; Victor J Dzau
Journal:  Circ Res       Date:  2014-10-08       Impact factor: 17.367

8.  Identification of candidates for tumor-specific alternative splicing in the thyroid.

Authors:  Gustavo S Guimarães; Flávia R M Latini; Cléber P Camacho; Rui M B Maciel; Emmanuel Dias-Neto; Janete M Cerutti
Journal:  Genes Chromosomes Cancer       Date:  2006-06       Impact factor: 5.006

9.  Avoiding the high Bonferroni penalty in genome-wide association studies.

Authors:  Xiaoyi Gao; Lewis C Becker; Diane M Becker; Joshua D Starmer; Michael A Province
Journal:  Genet Epidemiol       Date:  2010-01       Impact factor: 2.135

Review 10.  Emerging genetics of COPD.

Authors:  Annerose Berndt; Adriana S Leme; Steven D Shapiro
Journal:  EMBO Mol Med       Date:  2012-10-23       Impact factor: 12.137

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  10 in total

1.  Vulnerability and Genetic Susceptibility to Cigarette Smoke-Induced Emphysema in Mice.

Authors:  Irfan Rahman; Giovanna De Cunto; Isaac K Sundar; Giuseppe Lungarella
Journal:  Am J Respir Cell Mol Biol       Date:  2017-09       Impact factor: 6.914

2.  Reply to: Quantitative Histology Seriously Flawed by Lack of Lung Volume Measurement.

Authors:  Josiah E Radder; Steven D Shapiro
Journal:  Am J Respir Cell Mol Biol       Date:  2018-02       Impact factor: 6.914

3.  Chronic cigarette smoke exposure and pneumococcal infection induce oropharyngeal microbiota dysbiosis and contribute to long-lasting lung damage in mice.

Authors:  Markus Hilty; Tsering M Wüthrich; Aurélie Godel; Roberto Adelfio; Susanne Aebi; Sabrina S Burgener; Brunhilde Illgen-Wilcke; Charaf Benarafa
Journal:  Microb Genom       Date:  2020-12-09

Review 4.  Reactive Oxygen Species in Chronic Obstructive Pulmonary Disease.

Authors:  Samia Boukhenouna; Mark A Wilson; Karim Bahmed; Beata Kosmider
Journal:  Oxid Med Cell Longev       Date:  2018-02-11       Impact factor: 6.543

5.  A candidate gene identification strategy utilizing mouse to human big-data mining: "3R-tenet" in COPD genetic research.

Authors:  Sangeetha Vishweswaraiah; Leema George; Natarajan Purushothaman; Koustav Ganguly
Journal:  Respir Res       Date:  2018-06-06

Review 6.  E-cigarettes in patients with COPD: current perspectives.

Authors:  J B Morjaria; E Mondati; R Polosa
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2017-11-01

7.  Rapid Ex-Vivo Ciliogenesis and Dose-Dependent Effect of Notch Inhibition on Ciliogenesis of Respiratory Epithelia.

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Journal:  Biomolecules       Date:  2020-08-14

Review 8.  Genomics of asthma, allergy and chronic rhinosinusitis: novel concepts and relevance in airway mucosa.

Authors:  Anu Laulajainen-Hongisto; Annina Lyly; Paula Kauppi; Sanna Toppila-Salmi; Tanzeela Hanif; Kishor Dhaygude; Matti Kankainen; Risto Renkonen; Kati Donner; Pirkko Mattila; Tuomas Jartti; Jean Bousquet
Journal:  Clin Transl Allergy       Date:  2020-10-28       Impact factor: 5.871

9.  RIP3-dependent necroptosis contributes to the pathogenesis of chronic obstructive pulmonary disease.

Authors:  Dongshi Chen; Alyssa D Gregory; Xiaoyun Li; Jianxin Wei; Christine L Burton; Gregory Gibson; Stephen J Scott; Claudette M St Croix; Yingze Zhang; Steven D Shapiro
Journal:  JCI Insight       Date:  2021-06-22

Review 10.  Innate Immunity and Cell Surface Receptors in the Pathogenesis of COPD: Insights from Mouse Smoking Models.

Authors:  Giovanna De Cunto; Eleonora Cavarra; Barbara Bartalesi; Monica Lucattelli; Giuseppe Lungarella
Journal:  Int J Chron Obstruct Pulmon Dis       Date:  2020-05-20
  10 in total

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