Literature DB >> 28438837

An unpredicted aggregation-critical region of the actin-polymerizing protein TRIOBP-1/Tara, determined by elucidation of its domain structure.

Nicholas J Bradshaw1, Antony S K Yerabham2, Rita Marreiros2, Tao Zhang3,4, Luitgard Nagel-Steger3,4, Carsten Korth5.   

Abstract

Aggregation of specific proteins in the brains of patients with chronic mental illness as a result of disruptions in proteostasis is an emerging theme in the study of schizophrenia in particular. Proteins including DISC1 (disrupted in schizophrenia 1) and dysbindin-1B are found in insoluble forms within brain homogenates from such patients. We recently identified TRIOBP-1 (Trio-binding protein 1, also known as Tara) to be another such protein through an epitope discovery and proteomics approach by comparing post-mortem brain material from schizophrenia patients and control individuals. We hypothesized that this was likely to occur as a result of a specific subcellular process and that it, therefore, should be possible to identify a region of the TRIOBP-1 protein that is essential for its aggregation to occur. Here, we probe the domain organization of TRIOBP-1, finding it to possess two distinct coiled-coil domains: the central and C-terminal domains. The central domain inhibits the depolymerization of F-actin and is also responsible for oligomerization of TRIOBP-1. Along with an N-terminal pleckstrin homology domain, the central domain affects neurite outgrowth. In neuroblastoma cells it was found that the aggregation propensity of TRIOBP-1 arises from its central domain, with a short "linker" region narrowed to within amino acids 324-348, between its first two coiled coils, as essential for the formation of TRIOBP-1 aggregates. TRIOBP-1 aggregation, therefore, appears to occur through one or more specific cellular mechanisms, which therefore have the potential to be of physiological relevance for the biological process underlying the development of chronic mental illness.
© 2017 by The American Society for Biochemistry and Molecular Biology, Inc.

Entities:  

Keywords:  Domain structure; Mental illness; Subcellular localization; TRIOBP; Tara; actin; oligomerization; protein aggregation; protein stability; schizophrenia

Mesh:

Substances:

Year:  2017        PMID: 28438837      PMCID: PMC5465484          DOI: 10.1074/jbc.M116.767939

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  47 in total

1.  DICHROWEB, an online server for protein secondary structure analyses from circular dichroism spectroscopic data.

Authors:  Lee Whitmore; B A Wallace
Journal:  Nucleic Acids Res       Date:  2004-07-01       Impact factor: 16.971

2.  A comparative study of the relationship between protein structure and beta-aggregation in globular and intrinsically disordered proteins.

Authors:  Rune Linding; Joost Schymkowitz; Frederic Rousseau; Francesca Diella; Luis Serrano
Journal:  J Mol Biol       Date:  2004-09-03       Impact factor: 5.469

3.  Oligomer assembly of the C-terminal DISC1 domain (640-854) is controlled by self-association motifs and disease-associated polymorphism S704C.

Authors:  S Rutger Leliveld; Philipp Hendriks; Max Michel; Gustavo Sajnani; Verian Bader; Svenja Trossbach; Ingrid Prikulis; Rudolf Hartmann; Esther Jonas; Dieter Willbold; Jesús R Requena; Carsten Korth
Journal:  Biochemistry       Date:  2009-08-18       Impact factor: 3.162

4.  Subcellular targeting of DISC1 is dependent on a domain independent from the Nudel binding site.

Authors:  N J Brandon; I Schurov; L M Camargo; E J Handford; B Duran-Jimeniz; P Hunt; J K Millar; D J Porteous; M S Shearman; P J Whiting
Journal:  Mol Cell Neurosci       Date:  2005-04       Impact factor: 4.314

5.  Mutations in TRIOBP, which encodes a putative cytoskeletal-organizing protein, are associated with nonsyndromic recessive deafness.

Authors:  Saima Riazuddin; Shaheen N Khan; Zubair M Ahmed; Manju Ghosh; Kyle Caution; Sabiha Nazli; Madhulika Kabra; Ahmad U Zafar; Kevin Chen; Sadaf Naz; Anthony Antonellis; William J Pavan; Eric D Green; Edward R Wilcox; Penelope L Friedman; Robert J Morell; Sheikh Riazuddin; Thomas B Friedman
Journal:  Am J Hum Genet       Date:  2005-11-21       Impact factor: 11.025

6.  The pathogenic mechanism of dysbindin-1B toxic aggregation: BLOC-1 and intercellular vesicle trafficking.

Authors:  Wei Yang; Chunyan Zhu; Yan Shen; Qi Xu
Journal:  Neuroscience       Date:  2016-07-12       Impact factor: 3.590

7.  Analysis of gene expression in two large schizophrenia cohorts identifies multiple changes associated with nerve terminal function.

Authors:  P R Maycox; F Kelly; A Taylor; S Bates; J Reid; R Logendra; M R Barnes; C Larminie; N Jones; M Lennon; C Davies; J J Hagan; C A Scorer; C Angelinetta; M T Akbar; T Akbar; S Hirsch; A M Mortimer; T R E Barnes; J de Belleroche
Journal:  Mol Psychiatry       Date:  2009-03-03       Impact factor: 15.992

8.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

9.  AGGRESCAN: a server for the prediction and evaluation of "hot spots" of aggregation in polypeptides.

Authors:  Oscar Conchillo-Solé; Natalia S de Groot; Francesc X Avilés; Josep Vendrell; Xavier Daura; Salvador Ventura
Journal:  BMC Bioinformatics       Date:  2007-02-27       Impact factor: 3.169

10.  Identification of properties important to protein aggregation using feature selection.

Authors:  Yaping Fang; Shan Gao; David Tai; C Russell Middaugh; Jianwen Fang
Journal:  BMC Bioinformatics       Date:  2013-10-28       Impact factor: 3.169

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  11 in total

1.  Localization and functional consequences of a direct interaction between TRIOBP-1 and hERG proteins in the heart.

Authors:  David K Jones; Ashley C Johnson; Elon C Roti Roti; Fang Liu; Rebecca Uelmen; Rebecca A Ayers; Istvan Baczko; David J Tester; Michael J Ackerman; Matthew C Trudeau; Gail A Robertson
Journal:  J Cell Sci       Date:  2018-03-22       Impact factor: 5.285

2.  TRIOBP-5 sculpts stereocilia rootlets and stiffens supporting cells enabling hearing.

Authors:  Tatsuya Katsuno; Inna A Belyantseva; Alexander X Cartagena-Rivera; Keisuke Ohta; Shawn M Crump; Ronald S Petralia; Kazuya Ono; Risa Tona; Ayesha Imtiaz; Atteeq Rehman; Hiroshi Kiyonari; Mari Kaneko; Ya-Xian Wang; Takaya Abe; Makoto Ikeya; Cristina Fenollar-Ferrer; Gavin P Riordan; Elisabeth A Wilson; Tracy S Fitzgerald; Kohei Segawa; Koichi Omori; Juichi Ito; Gregory I Frolenkov; Thomas B Friedman; Shin-Ichiro Kitajiri
Journal:  JCI Insight       Date:  2019-06-20

Review 3.  Protein misassembly and aggregation as potential convergence points for non-genetic causes of chronic mental illness.

Authors:  Nicholas J Bradshaw; Carsten Korth
Journal:  Mol Psychiatry       Date:  2018-08-08       Impact factor: 15.992

4.  The NDE1 genomic locus can affect treatment of psychiatric illness through gene expression changes related to microRNA-484.

Authors:  Nicholas J Bradshaw; Liisa Ukkola-Vuoti; Maiju Pankakoski; Amanda B Zheutlin; Alfredo Ortega-Alonso; Minna Torniainen-Holm; Vishal Sinha; Sebastian Therman; Tiina Paunio; Jaana Suvisaari; Jouko Lönnqvist; Tyrone D Cannon; Jari Haukka; William Hennah
Journal:  Open Biol       Date:  2017-11       Impact factor: 6.411

Review 5.  Mechanisms of protein toxicity in neurodegenerative diseases.

Authors:  Chang Geon Chung; Hyosang Lee; Sung Bae Lee
Journal:  Cell Mol Life Sci       Date:  2018-06-12       Impact factor: 9.261

6.  Sp1 Suppresses miR-3178 to Promote the Metastasis Invasion Cascade via Upregulation of TRIOBP.

Authors:  Hui Wang; Kai Li; Yu Mei; Xuemei Huang; Zhenglin Li; Qingzhu Yang; Huanjie Yang
Journal:  Mol Ther Nucleic Acids       Date:  2018-04-26       Impact factor: 8.886

7.  Sequential phosphorylation of NDEL1 by the DYRK2-GSK3β complex is critical for neuronal morphogenesis.

Authors:  Youngsik Woo; Soo Jeong Kim; Bo Kyoung Suh; Yongdo Kwak; Hyun-Jin Jung; Truong Thi My Nhung; Dong Jin Mun; Ji-Ho Hong; Su-Jin Noh; Seunghyun Kim; Ahryoung Lee; Seung Tae Baek; Minh Dang Nguyen; Youngshik Choe; Sang Ki Park
Journal:  Elife       Date:  2019-12-09       Impact factor: 8.140

8.  Unbalanced bidirectional radial stiffness gradients within the organ of Corti promoted by TRIOBP.

Authors:  Hesam Babahosseini; Inna A Belyantseva; Rizwan Yousaf; Risa Tona; Shadan Hadi; Sayaka Inagaki; Elizabeth Wilson; Shin-Ichiro Kitajiri; Gregory I Frolenkov; Thomas B Friedman; Alexander X Cartagena-Rivera
Journal:  Proc Natl Acad Sci U S A       Date:  2022-06-23       Impact factor: 12.779

9.  Novel Variants Identified in Multiple Sclerosis Patients From Southern China.

Authors:  Hongxuan Wang; Lakhansing Arun Pardeshi; Xiaoming Rong; Enqin Li; Koon Ho Wong; Ying Peng; Ren-He Xu
Journal:  Front Neurol       Date:  2018-07-25       Impact factor: 4.003

Review 10.  Emerging roles of TRIO and F-actin-binding protein in human diseases.

Authors:  Sungjin Park; Hyunji Lee; Minhee Kim; Jisoo Park; Seon-Hwan Kim; Jongsun Park
Journal:  Cell Commun Signal       Date:  2018-06-11       Impact factor: 5.712

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