Literature DB >> 28435732

Crystal structures of three 4-substituted-2,2'-bipyridines synthesized by Sonogashira and Suzuki-Miyaura cross-coupling reactions.

Thuy Luong Thi Thu1, Ngan Nguyen Bich1, Hien Nguyen1, Luc Van Meervelt2.   

Abstract

Facile synthetic routes for three 4-substituted 2,2'-bi-pyridine derivatives, 4-[2-(4-methyl-phenyl)-ethyn-yl]-2,2'-bi-pyridine, C19H14N2, (I), 4-[2-(pyridin-3-yl)ethyn-yl]-2,2'-bi-pyridine, C17H11N3, (II), and 4-(indol-4-yl)-2,2'-bi-pyridine, C18H13N3, (III), via Sonogashira and Suzuki-Miyaura cross-coupling reactions, respect-ively, are described. As indicated by X-ray analysis, the 2,2'-bi-pyridine core, the ethyl-ene linkage and the substituents of (I) and (II) are almost planar [dihedral angles between the two ring systems: 8.98 (5) and 9.90 (6)° for the two mol-ecules of (I) in the asymmetric unit and 2.66 (14)° for (II)], allowing π-conjugation. On the contrary, in (III), the indole substituent ring is rotated significantly out of the bi-pyridine plane [dihedral angle = 55.82 (3)°], due to steric hindrance. The crystal packings of (I) and (II) are dominated by π-π inter-actions, resulting in layers of mol-ecules parallel to (30-2) in (I) and columns of mol-ecules along the a axis in (II). The packing of (III) exhibits zigzag chains of mol-ecules along the c axis inter-acting through N-H⋯N hydrogen bonds and π-π inter-actions. The contributions of unknown disordered solvent mol-ecules to the diffraction intensities in (II) were removed with the SQUEEZE [Spek (2015 ▸). Acta Cryst. C71, 9-18] algorithm of PLATON. The given chemical formula and other crystal data do not take into account these solvent mol-ecules.

Entities:  

Keywords:  2,2′-bi­pyridine; Sonogashira cross-coupling; Suzuki–Miyaura cross-coupling; crystal structure; dye-sensitized solar cells; palladium-catalyzed

Year:  2017        PMID: 28435732      PMCID: PMC5382633          DOI: 10.1107/S2056989017004662

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


Chemical context

The bidentate ligand 2,2′-bi­pyridine (Bpy) is one of the most studied chelate systems and has found applications in various fields, including catalysis (Kitanosono et al., 2015 ▸; Song et al., 2015 ▸), chemosensors for metal ions (Al Abdel Hamid et al., 2011 ▸), electroluminescent devices (Li et al., 2000 ▸), and mol­ecular shuttles (Lewis et al., 2016 ▸). In particular, as a result of their unique photophysical characteristics, 2,2′-bi­pyridine derivatives are used in the synthesis of photosensitizers (Grätzel, 2003 ▸, Grätzel, 2009 ▸; Chen et al., 2012 ▸; Nguyen et al., 2015 ▸). In order to fine tune its properties, great efforts have been made to develop new synthetic methods for function­alization of this bidentate ligand by introducing various substituents (Kaes et al., 2000 ▸; Newkome et al., 2004 ▸; Ortiz et al., 2013 ▸; Norris et al., 2013 ▸). In this paper, we report on the synthesis of three 4-substituted 2,2′-bi­pyridine derivatives, namely 4-(4-methyl­phenyl­ethyn­yl)-2,2′-bi­pyridine, C19H14N2, (I), 4-(pyridin-3-ylethyn­yl)-2,2′-bi­pyridine, C17H11N3, (II) and 4-(indol-4-yl)-2,2′-bi­pyridine, C18H13N3, (III), obtained from the Sonogashira (Sonogashira et al., 1975 ▸; Sonogashira, 2002 ▸; Negishi & de Meijere, 2002 ▸) and Suzuki–Miyaura (Miyaura & Suzuki, 1979 ▸; Suzuki, 1999 ▸; Kumar et al., 2014 ▸; Blangetti et al., 2013 ▸) cross-coupling reactions of 4-bromo-2,2′-bi­pyridine. The ethynyl bridge in (I) and (II) was introduced to decrease the steric hindrance between the pyridine ring and the aromatic substituent and at the same time to extend the π-conjugation. The crystal structures as well as geometry and the mol­ecular arrangement in the crystals of (I), (II) and (III) are reported herein.

Structural commentary

The structures of the three 4-substituted 2,2′-bi­pyridines (I), (II), and (III) were elucidated by 1H and 13C NMR spectros­copy using d1-chloro­form as solvent (see Synthesis and crystallization). The 1H NMR spectra of the three compounds show typical proton resonances and splitting patterns of the Bpy core. The proton resonances of the introduced alkyne or the heteroarene moiety are easily recognized. In the 13C NMR spectrum of (I) and (II), the two resonance signals at about 94.3 and 86.5 p.p.m. prove the 2,2′-bi­pyridine and the tolyl or pyridine substituent to be connected by a C≡C linker. These signals typical for Csp carbons are not observed in the 13C NMR spectrum of (III) as the heterocycle is directly attached to the 2,2′-bi­pyridine core. The mol­ecular conformations of the compounds (I), (II) and (III) determined in the X-ray structural analysis are shown in Fig. 1 ▸. The asymmetric unit of (I) (Fig. 1 ▸ a) consists of two mol­ecules with similar conformational features (r.m.s deviation = 0.120 Å) and are linked by a C—H⋯N hydrogen bond (Table 1 ▸). As expected, the aromatic substituents introduced via an ethyl­ene bridge in (I) (Fig. 1 ▸ a) and (II) (Fig. 1 ▸ b) are essentially coplanar with the 2,2′-bi­pyridine core, as indicated by the dihedral angles between the aromatic moieties, viz. 8.98 (5) and 9.90 (6)° in (I) and 2.66 (14)° in (II). On the other hand, the indole moiety and the bipyridyl ring are out of plane in (III) (Fig. 1 ▸ c) in order to reduce the van de Waals repulsion between H5 with H19 and H3 with H17, the dihedral angle between the mean planes of the bi­pyridine core and indole ring being 55.82 (3)°.
Figure 1

View of the asymmetric unit of (a) (I), (b) (II), and (c) (III) showing the atom-labelling schemes. Displacement ellipsoids are drawn at the 50% probability level.

Table 1

Hydrogen-bond geometry (Å, °) for (I)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯N280.952.533.472 (2)169
C26—H26⋯N7i 0.952.553.487 (3)171

Symmetry code: (i) .

The 2,2′-bipyridyl groups in the three compounds exhibit trans conformations and the pyridine rings are essentially co-planar, as indicated by the dihedral angles between the best planes through the two pyridine rings, viz. 3.40 (9) and 10.81 (9)° in (I), 0.4 (2)° in (II) and 11.66 (7)° in (III). These values are within the range 0.8–28.5° observed for the 2,2′-bi­pyridine derivatives substituted at the 4-position with an aromatic substituent (Table 4 ▸). All of these structural characteristics are consistent with those in our previous report (Nguyen et al., 2014 ▸).
Table 4

4-Substituted 2,2′-bi­pyridines present in the Cambridge Structural Database

The dihedral angle py–py is defined as the angle between the best planes through both pyridine rings and the dihedral angle py–Ar is defined as the angle between the best planes through the 4-substituted pyridine and the aromatic substituent.

4-SubstituentCSD refcodeDihedral angle py–py (°)Dihedral angle py–Ar (°)Reference
(substituted) phen­ylEWOYEW0.89.1Ramakrishnan et al. (2016)
 EWOXIZ7.8/28.5/12.535.8/32.8/40.8Ramakrishnan et al. (2016)
 ZOZRIF6.624.5Wang et al. (1996)
 RIPQUC15.742.9Cargill Thompson et al. (1997)
triazineMULRUI14.2/3.7/18.58.1/6.1/25.2Laramée-Milette et al. (2015)
(substituted) naphthaleneEWOXUL2.8/10.8/1.86.0/26.1/32.9Ramakrishnan et al. (2016)
 EWOYIA18.2/20.834.8/31.7Ramakrishnan et al. (2016)
 OKAGOX23.0/9.644.6/39.3He et al. (2011)
2,2′-bi­pyridineTEBGAI3.2/2.70.0/0.0Honey & Steel (1991)
anthraceneEWOWUK4.073.8Ramakrishnan et al. (2016)
phenanthreneEWOXAR5.264.8Ramakrishnan et al. (2016)
 EWOXEV11.153.1Ramakrishnan et al. (2016)
pyreneEWOXOF4.051.6Ramakrishnan et al. (2016)

Note: (a) Groom et al. (2016 ▸).

In conclusion, we have described facile synthetic procedures for 4-alkynylated and 4-aryl­ated 2,2′-bi­pyridines by means of the Sonogashira and Suzuki–Miyaura cross-coupling reactions of 4-bromo-2,2′-bi­pyridine. Based on this strategy, two novel 4-alkynylbi­pyridines and one 4-aryl-2,2′-bi­pyridine were synthesized whose structures were partially elucidated by NMR spectroscopic methods. In addition, the X-ray structural analysis revealed the planarity of the 4-alkynylbi­pyridines as the triple-bond linker separates the bi­pyridine and the introduced aromatic parts. This provides a hint for fine-tuning the electronic properties of this ligand by introducing suitable substituents. On the other hand, the introduced heterocyclic ring in compound (III), formed via Suzuki–Miyaura cross-coupling is twisted from the 2,2′-bi­pyridine ring due to the van der Waals repulsive force of the hydrogen atoms in close proximity.

Supra­molecular features

The crystal packing of (I) is dominated by πpyridine–πpyridine and πpyridine–πphen­yl stacking inter­actions [Fig. 2 ▸; Cg1⋯Cg3i = 3.7769 (11) and Cg4⋯Cg5ii = 3.8707 (11) Å; Cg1, Cg3, Cg4 and Cg5 are the centroids of the N1/C2–C6, C15–C20, N22/C23–27 and N28/C29–C33 rings, respectively; symmetry codes: (i) −x, −y, −z; (ii) −x, −y + 1, −z]. The mol­ecules lie in layers parallel to (30) and within these planes, neighboring mol­ecules inter­act with each other through C—H⋯N hydrogen bonds (Table 1 ▸).
Figure 2

Partial crystal packing of (I) showing C—H⋯N (blue dotted lines) and π–π (gray dotted lines) inter­actions. [Symmetry codes: (i) −x, −y, −z; (ii) −x, −y + 1, −z; (iii) x, y + 1, z].

Similarly, π–π inter­actions between the pyridine rings of (II) result in columms of mol­ecules along the a-axis direction [Cg1⋯Cg1i = Cg2⋯Cg2i = Cg3⋯Cg3i = 3.7436 (3) Å; Cg1, Cg2, and Cg3 are centroids of the N1/C2–C6; N7/C7–C12 and N15/C16–C20 rings, respectively; symmetry code: (i) x + 1, y, z]. Neighboring columns inter­act by C—H⋯N hydrogen bonds (Fig. 3 ▸, Table 2 ▸). In between the columns, large voids (375 Å3) contain disordered solvent mol­ecules.
Figure 3

Crystal packing of (II) viewed along the a axis. C—H⋯N hydrogen bonds between neighboring columns of stacked mol­ecules are shown as blue dotted lines. Voids are contoured (green grid) at 0.2 Å away from the mol­ecular surface resulting in a total void volume of 375 Å3. [Symmetry codes: (i) x − 1, −y + , z − ; (ii) x + 1, −y + , z + ].

Table 2

Hydrogen-bond geometry (Å, °) for (II)

D—H⋯A D—HH⋯A DA D—H⋯A
C5—H5⋯N7i 0.952.553.475 (5)163
C18—H18⋯N1ii 0.952.603.509 (5)161

Symmetry codes: (i) ; (ii) .

The mol­ecules in the crystal packing of (III) are arranged in zigzag chains running along the c axis by hydrogen-bonding inter­actions in a head-to-tail manner between N13—H13⋯N7i [symmetry code: (i) x, −y + , z + ; Table 3 ▸, Fig. 4 ▸]. These chains inter­act by π–π stacking between pyridine rings [Cg2⋯Cg3i = 3.6920 (8) Å; Cg2 and Cg3 are the centroids of the N1/C2–C6 and N7/C8–C12 rings, respectively; symmetry code: (i) x, −y + , z + ] and C—H⋯π inter­actions (Table 3 ▸).
Table 3

Hydrogen-bond geometry (Å, °) for (III)

Cg1, Cg2, Cg3 and Cg4 are the centroids of rings N13/C14–C16/C21, N1/C2–C6, N7/C8–C12 and C16–C21, respectively.

D—H⋯A D—HH⋯A DA D—H⋯A
N13—H13⋯N7i 0.882.223.002 (2)148
C14—H14⋯N1ii 0.952.393.336 (2)176
C5—H5⋯Cg1iii 0.952.583.3371 (14)137
C6—H6⋯Cg4iii 0.952.783.5268 (14)136
C11—H11⋯Cg4iv 0.952.563.3548 (15)141
C17—H17⋯Cg2v 0.952.853.6555 (15)143
C20—H20⋯Cg3vi 0.952.863.5814 (16)133

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) ; (vi) .

Figure 4

Crystal packing of (III) showing N—H⋯N hydrogen bonds (blue dotted lines) and π–π (gray dotted lines) inter­actions·[Symmetry codes: (i) x, −y + , z + ; (ii) x, −y + , z − ; (iii) x, −y + , z − ; (iv) x, −y + , z + ].

Database survey

An extension of the π-conjugated system of 2,2′-bi­pyridine can be obtained by the introduction of an aromatic substituent. A search in the Cambridge Structural Database (CSD, Version 5.38, last update February 2017; Groom et al., 2016 ▸) for crystal structures of 2,2′-bi­pyridine derivatives substituted at the 4-position with an aromatic substituent resulted in 13 unique hits (excluding organometallic compounds) with substituents ranging from smaller phenyl and triazine rings to bi­pyridine, naphthalene, anthracene and phenanthrene to a larger pyrene ring (Table 4 ▸). However, it is evident from the dihedral angle between the best planes through pyridine and its aromatic 4-substituent (varying from 0.0 to 73.8°) that the degree of extension of the π-conjugated system depends on the steric hindrance of the substituent and the π–π inter­actions in the crystal packing.

Synthesis and crystallization

The compound 4-bromo-2,2′-bi­pyridine was prepared using literature procedures (Egbe et al., 2001 ▸). The alkynylated and aryl­ated Bpy derivatives (I), (II), and (III) were prepared by the palladium-catalyzed Sonogashira and the palladium-catalyzed Suzuki–Miyaura cross-coupling reactions. ( ) Synthesis of 4-(4-methyl­phenyl­ethyn­yl)-2,2′-bi­pyridine (I) Toluene (4.0 ml) was deaerated by exchanging between a vacuum and a stream of argon (3 times). To this argon-saturated solution were added 4-bromo-2,2′-bi­pyridine (59 mg, 0.25 mmol, 1.0 equiv), Pd(PPh3)4 (28.5 mg, 0.025 mmol, 10 mol%) and CuI (10 mg, 0.050 mmol, 20 mol%). The pale-yellow mixture obtained was degassed again as described above. To the reaction mixture, a solution of p-tolyl­acetyl­ene (34.8 mg, 0.3 mmol, 1.2 equiv) in argon-saturated toluene (1.0 ml) was added dropwise over 15 minutes. The reaction mixture was heated at 323 K for 4 h. The reaction mixture turned reddish brown when the cross-coupling completed as indicated by TLC (EtOAc:n-hexane 1:4, v/v). The reaction mixture was diluted with EtOAc, washed with water (3 times), dried over anhydrous Na2SO4, and concentrated under reduced pressure. The residue was purified by SiO2 column chromatography to furnish the 4-alkynated 2,2′-bi­pyridine (I) as a brownish yellow solid (43 mg, 64%). M.p. 365–367 K; 1H NMR (CDCl3, 500 MHz): δ (p.p.m.) 8.70 (dt, J = 4.5 Hz and 0.5 Hz, 1 H), 8.65 (d, J = 5.0 Hz, 1 H), 8.52 (s, 1 H), 8.40 (dd, J = 8.0 Hz and 0.5 Hz, 1 H), 7.82 (td, J = 7.5 Hz and 1.5 Hz, 1 H), 7.45 (d, J = 8 Hz, 2 H, Ar), 7.38 (dd, J = 5.0 Hz and 1.0 Hz, 1 H), 7.32 (m, 1 H), 7.19 (d, J = 8 Hz, 2 H, Ar), 2.38 (s, 3 H, –CH3). 13C NMR (CDCl3, 125 MHz): δ(p.p.m.) 156.2, 155.6, 149.2, 149.1, 139.5, 137.0, 132.7, 131.8, 129.2, 125.2, 123.9, 123.2, 121.1, 119.2, 94.3 and 86.5 (C≡C), 21.6 (–CH3). Besides the desired cross-coupling product, a small amount of the Glaser homo-coupling by-product was also observed. Single crystals of (I) suitable for X-ray structure analysis were obtained by recrystallization from chloro­form. ( ) 4-(Pyridine-3-ylethyn­yl)-2,2′-bi­pyridine (II) Following the same procedure for (I), except that no CuI co-catalyst was used, (II) was obtained from 4-bromo-2,2′-bi­pyridine (59 mg, 0.25 mmol, 1.0 equiv) and pyridine-3-yl­acetyl­ene (31 mg, 0.3 mmol, 1.2 equiv) after 4 h at 373 K as a white solid (50 mg, 78%). M.p. 398–400 K; 1H NMR (CDCl3, 500 MHz): δ (p.p.m.) 8.81 (s, 1 H), 8.71 (s, 2 H), 8.62 (dd, J = 5.0 Hz and 1.0 Hz, 1 H), 8.57 (s, 1 H), 8.43 (d, J = 7.5 Hz, 1 H), 7.85 (m, 2 H), 7.42 (d, J = 8.0 Hz, 1 H), 7.33 (m, 2 H). 13C NMR (CDCl3, 125 MHz): δ(p.p.m.) 156.3, 155.3, 152.4, 149.4, 149.3, 149.2, 138.7, 137.0, 131.6, 125.1, 124.0, 123.2, 123.2, 121.2, 119.5, 90.2 (C≡C). Single crystals of (II) suitable for X-ray structure analysis were obtained by recrystallization from ethyl acetate. ( ) Synthesis of 4-(1 -indol-4-yl)-2,2′-bi­pyridine (III) Toluene was degassed by exchanging between a vacuum and a stream of argon (3 times). 5-Bromo-2,2′-bi­pyridine (58 mg, 0.25 mmol, 1.0 equiv) and Pd(Ph3P)4 (28.8 mg, 0.025 mmol, 10 mol%) were dissolved in this degassed toluene (4 mL). To the obtained solution, H2O (1 ml), K3PO4 (105.5 mg, 0.5 mmol, 2.0 equiv), and 1H-indol-4-ylboronic acid (48.3 mg, 0.3 mmol, 1.2 equiv) were added. The reaction was stirred vigorously under an argon atmosphere at 383 K until TLC (n-hexa­ne–ethyl acetate 95:5,v/v) indicated the complete consumption of the starting material. The reaction mixture was filtered to remove insoluble particles. The filtrate was washed several times with H2O, dried over Na2SO4, and concentrated under reduced pressure by rotary evaporation. The residue was purified by SiO2 column chromatography (n-hexa­ne–ethyl acetate 97:3, v/v) to furnish the desired 4-aryl­ated 2,2′-bi­pyridine (III) as a yellow solid (32.5 mg, 48%). M.p. 356–357 K; 1H NMR (CDCl3, 500 MHz): δ (p.p.m.) 8.86 (br s, 1 H, NH indole), 8.74 (m, 2 H), 8.70 (d, J = 5.0 Hz, 1 H), 8.45 (d, J = 8.0 Hz, 1 H), 8.04 (t, J = 1.0 Hz, 1 H), 7.83 (td, J = 7.5 Hz and 2.0 Hz, 1 H), 7.60 (dd, J = 5.0 Hz and 2.0 Hz, 1 H), 7.55 (dd, J = 8.0 Hz and 2.0 Hz, 1 H), 7.42 (d, J = 7.5 Hz, 1 H), 7.31 (m, 1 H), 7.22 (t, J = 3.0 Hz, 1 H), 6.61 (t, J 2.0 Hz, 1 H). 13C NMR (CDCl3, 125 MHz)) : δ(p.p.m.) 156.5, 156.3, 150.7, 149.4, 149.1, 136.9, 136.4, 129.9, 128.5, 125.3, 123.7, 121.7, 121.4, 121.3, 119.6, 119.2, 111.6, 103.2. Single crystals of (III) suitable for X-ray structure analysis were obtained by recrystallization from chloro­form.

Structure solution and refinement

Crystal data, data collection and structure refinement details are summarized in Table 5 ▸. The structures of (I) and (III) were solved using SHELXS97 (Sheldrick, 2008 ▸) and for (II) by charge flipping using Olex2.solve (Bourhis et al., 2015 ▸). All hydrogen atoms were placed in idealized positions and refined in a riding mode with U iso(H) = 1.2 times those of their parent atoms (1.5 times for methyl groups), with C—H distances of 0.95 Å (aromatic) and 0.98 Å (CH3) and N—H distances of 0.88 Å.
Table 5

Experimental details

 (I)(II)(III)
Crystal data
Chemical formulaC19H14N2 C17H11N3 C18H13N3
M r 270.32257.29271.31
Crystal system, space groupMonoclinic, P21/c Monoclinic, P21/c Monoclinic, P21/c
Temperature (K)100100100
a, b, c (Å)9.8697 (7), 12.6040 (7), 22.8414 (13)3.7436 (3), 34.146 (3), 10.7528 (9)9.6951 (6), 12.0142 (7), 12.0376 (9)
β (°)97.890 (6)94.799 (8)109.552 (8)
V3)2814.5 (3)1369.7 (2)1321.28 (15)
Z 844
Radiation typeMo KαMo KαMo Kα
μ (mm−1)0.080.080.08
Crystal size (mm)0.30 × 0.15 × 0.100.40 × 0.10 × 0.100.35 × 0.35 × 0.20
 
Data collection
DiffractometerAgilent SuperNova (single source at offset, Eos detector)Agilent SuperNova (single source at offset, Eos detector)Agilent SuperNova (single source at offset, Eos detector)
Absorption correctionMulti-scan (CrysAlis PRO; Rigaku OD, 2015)Multi-scan (CrysAlis PRO; Rigaku OD, 2015)Multi-scan (CrysAlis PRO; Rigaku OD, 2015)
T min, T max 0.552, 1.0000.695, 1.0000.993, 1.000
No. of measured, independent and observed [I > 2σ(I)] reflections12597, 5747, 37284235, 1926, 16458569, 2692, 2363
R int 0.0250.0220.023
θmax (°)26.423.326.4
(sin θ/λ)max−1)0.6250.5550.625
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.054, 0.146, 1.040.083, 0.208, 1.150.038, 0.095, 1.06
No. of reflections574719262692
No. of parameters381181190
H-atom treatmentH-atom parameters constrainedH-atom parameters constrainedH-atom parameters constrained
Δρmax, Δρmin (e Å−3)0.24, −0.220.44, −0.290.21, −0.23

Computer programs: CrysAlis PRO (Rigaku OD, 2015 ▸), SHELXS97 (Sheldrick, 2008 ▸), Olex2.solve (Bourhis et al., 2015 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and OLEX2 (Dolomanov et al., 2009 ▸).

For (II) a region of electron density amounting to the scattering from approximately 10.7 carbon atoms, apparently disordered in channels between columns of stacking mol­ecules, was removed with the SQUEEZE routine of PLATON (Spek, 2015 ▸) after it proved impossible to identify it with any reasonable solvent mol­ecule. A suggestion of possible twinning generated by PLATON (Spek, 2009 ▸) was further checked but subsequent refinement did not improve and was neglected. Crystal structure: contains datablock(s) global, II, III, I. DOI: 10.1107/S2056989017004662/zs2378sup1.cif Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989017004662/zs2378Isup2.hkl Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989017004662/zs2378IIsup3.hkl Structure factors: contains datablock(s) III. DOI: 10.1107/S2056989017004662/zs2378IIIsup4.hkl Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989017004662/zs2378Isup5.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989017004662/zs2378IIsup6.cml Click here for additional data file. Supporting information file. DOI: 10.1107/S2056989017004662/zs2378IIIsup7.cml CCDC references: 1540011, 1540010, 1540009 Additional supporting information: crystallographic information; 3D view; checkCIF report
C19H14N2Dx = 1.276 Mg m3
Mr = 270.32Melting point = 365–367 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 9.8697 (7) ÅCell parameters from 2955 reflections
b = 12.6040 (7) Åθ = 3.0–28.1°
c = 22.8414 (13) ŵ = 0.08 mm1
β = 97.890 (6)°T = 100 K
V = 2814.5 (3) Å3Block, orange-colourless
Z = 80.30 × 0.15 × 0.10 mm
F(000) = 1136
Agilent SuperNova (single source at offset, Eos detector) diffractometer5747 independent reflections
Radiation source: SuperNova (Mo) X-ray Source3728 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.025
Detector resolution: 15.9631 pixels mm-1θmax = 26.4°, θmin = 2.7°
ω scansh = −12→9
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2015)k = −15→15
Tmin = 0.552, Tmax = 1.000l = −25→28
12597 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.054Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.146H-atom parameters constrained
S = 1.04w = 1/[σ2(Fo2) + (0.0565P)2 + 0.7915P] where P = (Fo2 + 2Fc2)/3
5747 reflections(Δ/σ)max < 0.001
381 parametersΔρmax = 0.24 e Å3
0 restraintsΔρmin = −0.22 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
C1D0.44761 (19)0.30825 (17)0.43143 (8)0.0253 (5)
N220.21628 (16)0.57648 (13)0.03346 (7)0.0249 (4)
C230.20493 (18)0.47210 (15)0.04431 (8)0.0208 (4)
C240.23091 (18)0.42918 (16)0.10057 (8)0.0219 (4)
H240.22250.35490.10630.026*
C250.26964 (18)0.49598 (16)0.14880 (8)0.0219 (4)
C260.28021 (19)0.60404 (16)0.13795 (9)0.0258 (5)
H260.30570.65250.16940.031*
C270.2527 (2)0.63910 (16)0.08023 (9)0.0277 (5)
H270.26030.71300.07330.033*
N280.15236 (16)0.29935 (12)0.00260 (7)0.0233 (4)
C290.16089 (18)0.40394 (15)−0.00772 (8)0.0209 (4)
C300.1289 (2)0.44677 (16)−0.06415 (8)0.0265 (5)
H300.13770.5208−0.07050.032*
C310.0845 (2)0.38021 (16)−0.11061 (9)0.0300 (5)
H310.06180.4079−0.14940.036*
C320.0731 (2)0.27292 (17)−0.10025 (9)0.0281 (5)
H320.04200.2252−0.13140.034*
C330.1085 (2)0.23716 (16)−0.04304 (9)0.0252 (5)
H330.10090.1633−0.03590.030*
C340.29879 (19)0.45398 (16)0.20791 (8)0.0233 (5)
C350.32897 (18)0.41970 (16)0.25663 (8)0.0226 (4)
C360.36776 (18)0.38063 (16)0.31578 (8)0.0214 (4)
C370.38186 (19)0.27264 (16)0.32746 (9)0.0251 (5)
H370.36470.22280.29610.030*
C380.4208 (2)0.23774 (16)0.38463 (9)0.0275 (5)
H380.42940.16370.39210.033*
C390.4325 (2)0.41597 (17)0.41955 (8)0.0284 (5)
H390.44900.46560.45100.034*
C400.3939 (2)0.45209 (17)0.36263 (8)0.0271 (5)
H400.38510.52610.35530.033*
C410.4909 (2)0.26987 (19)0.49369 (9)0.0352 (5)
H41A0.58290.29630.50790.053*
H41B0.49130.19210.49420.053*
H41C0.42650.29620.51940.053*
N10.30594 (16)0.07848 (13)0.21333 (7)0.0237 (4)
C20.29537 (18)−0.02679 (15)0.20395 (8)0.0197 (4)
C30.25839 (18)−0.07017 (16)0.14808 (8)0.0209 (4)
H30.2505−0.14490.14320.025*
C40.23300 (18)−0.00324 (16)0.09931 (8)0.0212 (4)
C50.24522 (18)0.10603 (16)0.10882 (8)0.0240 (5)
H50.22960.15470.07680.029*
C60.28062 (19)0.14124 (15)0.16604 (8)0.0245 (4)
H60.28750.21570.17230.029*
N70.34111 (16)−0.19977 (13)0.24599 (7)0.0231 (4)
C80.32952 (18)−0.09575 (15)0.25668 (8)0.0202 (4)
C90.3519 (2)−0.05342 (16)0.31331 (8)0.0258 (5)
H90.34070.02040.31950.031*
C100.3908 (2)−0.12057 (17)0.36064 (8)0.0285 (5)
H100.4065−0.09360.39980.034*
C110.4063 (2)−0.22683 (17)0.34999 (9)0.0290 (5)
H110.4345−0.27450.38150.035*
C120.3800 (2)−0.26281 (17)0.29244 (9)0.0284 (5)
H120.3901−0.33650.28540.034*
C130.19552 (19)−0.04592 (15)0.04086 (8)0.0216 (4)
C140.16254 (19)−0.08025 (16)−0.00793 (8)0.0231 (4)
C150.12182 (18)−0.12154 (16)−0.06645 (8)0.0220 (4)
C160.10184 (19)−0.22989 (16)−0.07588 (9)0.0243 (4)
H160.1163−0.2779−0.04360.029*
C170.06086 (19)−0.26739 (16)−0.13242 (9)0.0250 (5)
H170.0462−0.3414−0.13820.030*
C180.04061 (19)−0.20031 (16)−0.18071 (8)0.0253 (5)
C190.06191 (19)−0.09226 (16)−0.17123 (8)0.0265 (5)
H190.0494−0.0449−0.20390.032*
C200.10105 (19)−0.05250 (16)−0.11494 (8)0.0250 (5)
H200.11380.0217−0.10920.030*
C21−0.0027 (2)−0.24223 (17)−0.24197 (9)0.0319 (5)
H21A−0.0892−0.2089−0.25870.048*
H21B−0.0150−0.3193−0.24030.048*
H21C0.0678−0.2258−0.26690.048*
U11U22U33U12U13U23
C1D0.0183 (10)0.0412 (13)0.0158 (10)−0.0012 (9)0.0007 (8)0.0047 (9)
N220.0308 (9)0.0233 (9)0.0196 (9)−0.0029 (7)0.0002 (7)0.0013 (7)
C230.0205 (10)0.0229 (11)0.0185 (10)0.0015 (8)0.0005 (8)0.0026 (8)
C240.0234 (10)0.0223 (11)0.0191 (10)0.0009 (8)−0.0001 (8)0.0033 (8)
C250.0204 (10)0.0272 (11)0.0173 (10)0.0007 (8)0.0001 (8)0.0015 (8)
C260.0295 (11)0.0274 (11)0.0195 (10)−0.0028 (9)−0.0006 (8)−0.0028 (9)
C270.0366 (12)0.0235 (11)0.0220 (11)−0.0024 (9)0.0003 (9)0.0027 (9)
N280.0273 (9)0.0238 (9)0.0184 (9)0.0004 (7)0.0014 (7)0.0011 (7)
C290.0195 (10)0.0248 (11)0.0182 (10)0.0022 (8)0.0016 (8)0.0025 (8)
C300.0332 (12)0.0243 (11)0.0206 (11)−0.0001 (9)−0.0017 (9)0.0039 (8)
C310.0387 (12)0.0337 (12)0.0158 (10)0.0006 (10)−0.0026 (9)0.0034 (9)
C320.0319 (11)0.0318 (11)0.0194 (11)−0.0021 (9)−0.0002 (9)−0.0033 (9)
C330.0302 (11)0.0238 (11)0.0205 (11)−0.0006 (9)0.0002 (9)0.0008 (8)
C340.0224 (10)0.0288 (12)0.0179 (11)−0.0003 (8)−0.0001 (8)0.0001 (9)
C350.0209 (10)0.0275 (11)0.0191 (10)0.0006 (8)0.0012 (8)−0.0017 (9)
C360.0181 (9)0.0307 (11)0.0150 (9)0.0004 (8)0.0011 (7)0.0011 (8)
C370.0259 (10)0.0305 (11)0.0180 (11)−0.0007 (9)0.0003 (8)−0.0006 (9)
C380.0297 (11)0.0290 (12)0.0229 (12)−0.0009 (9)0.0002 (9)0.0041 (9)
C390.0308 (11)0.0375 (13)0.0165 (10)0.0004 (9)0.0019 (8)−0.0050 (9)
C400.0299 (11)0.0295 (12)0.0214 (11)0.0023 (9)0.0014 (9)−0.0004 (9)
C410.0327 (12)0.0542 (15)0.0180 (11)−0.0016 (11)0.0005 (9)0.0055 (10)
N10.0274 (9)0.0238 (9)0.0190 (9)−0.0005 (7)−0.0003 (7)0.0004 (7)
C20.0163 (9)0.0252 (11)0.0174 (10)0.0006 (8)0.0016 (7)0.0010 (8)
C30.0217 (10)0.0221 (11)0.0185 (10)0.0004 (8)0.0013 (8)0.0016 (8)
C40.0168 (9)0.0291 (11)0.0176 (10)−0.0002 (8)0.0027 (7)0.0010 (8)
C50.0240 (10)0.0261 (11)0.0209 (10)0.0001 (8)−0.0009 (8)0.0056 (8)
C60.0286 (11)0.0199 (10)0.0239 (11)−0.0009 (8)−0.0005 (8)0.0031 (8)
N70.0272 (9)0.0227 (9)0.0189 (9)0.0003 (7)0.0012 (7)0.0024 (7)
C80.0183 (9)0.0246 (11)0.0176 (10)−0.0009 (8)0.0016 (7)0.0012 (8)
C90.0328 (11)0.0258 (11)0.0181 (10)−0.0006 (9)0.0015 (8)−0.0016 (8)
C100.0360 (12)0.0342 (12)0.0147 (10)−0.0028 (9)0.0008 (9)−0.0002 (9)
C110.0322 (12)0.0363 (12)0.0176 (11)0.0021 (10)0.0000 (9)0.0070 (9)
C120.0352 (12)0.0279 (12)0.0215 (12)0.0042 (9)0.0013 (9)0.0047 (9)
C130.0212 (10)0.0244 (11)0.0185 (10)0.0003 (8)0.0004 (8)0.0054 (8)
C140.0221 (10)0.0265 (11)0.0203 (11)0.0024 (8)0.0016 (8)0.0048 (9)
C150.0179 (9)0.0314 (12)0.0160 (10)0.0006 (8)0.0004 (8)0.0003 (8)
C160.0245 (10)0.0298 (11)0.0179 (10)0.0028 (9)0.0007 (8)0.0034 (9)
C170.0256 (11)0.0276 (11)0.0213 (11)0.0009 (9)0.0014 (8)0.0010 (9)
C180.0203 (10)0.0353 (12)0.0196 (10)0.0012 (9)0.0006 (8)−0.0003 (9)
C190.0266 (11)0.0349 (12)0.0175 (10)−0.0002 (9)0.0005 (8)0.0069 (9)
C200.0254 (10)0.0280 (11)0.0214 (11)0.0001 (8)0.0025 (8)0.0019 (8)
C210.0346 (12)0.0403 (13)0.0190 (12)0.0007 (10)−0.0025 (9)0.0000 (9)
C1D—C381.387 (3)N1—C21.346 (2)
C1D—C391.389 (3)N1—C61.335 (2)
C1D—C411.507 (3)C2—C31.390 (3)
N22—C231.346 (2)C2—C81.486 (3)
N22—C271.337 (2)C3—H30.9500
C23—C241.385 (3)C3—C41.392 (3)
C23—C291.482 (3)C4—C51.397 (3)
C24—H240.9500C4—C131.440 (3)
C24—C251.398 (3)C5—H50.9500
C25—C261.391 (3)C5—C61.379 (3)
C25—C341.442 (3)C6—H60.9500
C26—H260.9500N7—C81.341 (2)
C26—C271.382 (3)N7—C121.339 (2)
C27—H270.9500C8—C91.389 (3)
N28—C291.344 (2)C9—H90.9500
N28—C331.328 (2)C9—C101.385 (3)
C29—C301.393 (3)C10—H100.9500
C30—H300.9500C10—C111.374 (3)
C30—C311.376 (3)C11—H110.9500
C31—H310.9500C11—C121.381 (3)
C31—C321.380 (3)C12—H120.9500
C32—H320.9500C13—C141.198 (3)
C32—C331.381 (3)C14—C151.439 (3)
C33—H330.9500C15—C161.392 (3)
C34—C351.193 (3)C15—C201.401 (3)
C35—C361.440 (3)C16—H160.9500
C36—C371.390 (3)C16—C171.383 (3)
C36—C401.396 (3)C17—H170.9500
C37—H370.9500C17—C181.382 (3)
C37—C381.381 (3)C18—C191.390 (3)
C38—H380.9500C18—C211.502 (3)
C39—H390.9500C19—H190.9500
C39—C401.381 (3)C19—C201.385 (3)
C40—H400.9500C20—H200.9500
C41—H41A0.9800C21—H21A0.9800
C41—H41B0.9800C21—H21B0.9800
C41—H41C0.9800C21—H21C0.9800
C38—C1D—C39118.15 (18)C6—N1—C2116.97 (16)
C38—C1D—C41121.38 (19)N1—C2—C3122.60 (17)
C39—C1D—C41120.47 (19)N1—C2—C8116.32 (16)
C27—N22—C23116.74 (16)C3—C2—C8121.05 (18)
N22—C23—C24122.87 (18)C2—C3—H3120.3
N22—C23—C29116.20 (16)C2—C3—C4119.46 (19)
C24—C23—C29120.93 (17)C4—C3—H3120.3
C23—C24—H24120.3C3—C4—C5118.08 (18)
C23—C24—C25119.46 (18)C3—C4—C13120.70 (18)
C25—C24—H24120.3C5—C4—C13121.22 (17)
C24—C25—C34120.98 (18)C4—C5—H5121.0
C26—C25—C24117.94 (17)C6—C5—C4118.03 (18)
C26—C25—C34121.07 (18)C6—C5—H5121.0
C25—C26—H26120.9N1—C6—C5124.84 (19)
C27—C26—C25118.26 (18)N1—C6—H6117.6
C27—C26—H26120.9C5—C6—H6117.6
N22—C27—C26124.72 (19)C12—N7—C8117.27 (17)
N22—C27—H27117.6N7—C8—C2116.08 (16)
C26—C27—H27117.6N7—C8—C9122.57 (17)
C33—N28—C29117.57 (16)C9—C8—C2121.31 (18)
N28—C29—C23116.51 (16)C8—C9—H9120.5
N28—C29—C30122.05 (18)C10—C9—C8118.94 (19)
C30—C29—C23121.43 (17)C10—C9—H9120.5
C29—C30—H30120.5C9—C10—H10120.6
C31—C30—C29119.01 (19)C11—C10—C9118.90 (18)
C31—C30—H30120.5C11—C10—H10120.6
C30—C31—H31120.3C10—C11—H11120.7
C30—C31—C32119.32 (19)C10—C11—C12118.55 (19)
C32—C31—H31120.3C12—C11—H11120.7
C31—C32—H32121.1N7—C12—C11123.7 (2)
C31—C32—C33117.79 (19)N7—C12—H12118.1
C33—C32—H32121.1C11—C12—H12118.1
N28—C33—C32124.24 (19)C14—C13—C4178.9 (2)
N28—C33—H33117.9C13—C14—C15179.5 (2)
C32—C33—H33117.9C16—C15—C14120.93 (18)
C35—C34—C25177.1 (2)C16—C15—C20118.98 (18)
C34—C35—C36178.5 (2)C20—C15—C14120.09 (18)
C37—C36—C35121.45 (18)C15—C16—H16120.1
C37—C36—C40118.79 (18)C17—C16—C15119.80 (18)
C40—C36—C35119.75 (18)C17—C16—H16120.1
C36—C37—H37120.0C16—C17—H17119.1
C38—C37—C36120.05 (19)C18—C17—C16121.87 (19)
C38—C37—H37120.0C18—C17—H17119.1
C1D—C38—H38119.2C17—C18—C19118.20 (18)
C37—C38—C1D121.55 (19)C17—C18—C21121.32 (19)
C37—C38—H38119.2C19—C18—C21120.49 (18)
C1D—C39—H39119.5C18—C19—H19119.5
C40—C39—C1D120.98 (19)C20—C19—C18121.07 (18)
C40—C39—H39119.5C20—C19—H19119.5
C36—C40—H40119.8C15—C20—H20120.0
C39—C40—C36120.49 (19)C19—C20—C15120.07 (19)
C39—C40—H40119.8C19—C20—H20120.0
C1D—C41—H41A109.5C18—C21—H21A109.5
C1D—C41—H41B109.5C18—C21—H21B109.5
C1D—C41—H41C109.5C18—C21—H21C109.5
H41A—C41—H41B109.5H21A—C21—H21B109.5
H41A—C41—H41C109.5H21A—C21—H21C109.5
H41B—C41—H41C109.5H21B—C21—H21C109.5
C1D—C39—C40—C360.7 (3)N1—C2—C3—C41.0 (3)
N22—C23—C24—C250.5 (3)N1—C2—C8—N7−169.28 (16)
N22—C23—C29—N28178.53 (16)N1—C2—C8—C98.8 (3)
N22—C23—C29—C30−2.1 (3)C2—N1—C6—C5−0.2 (3)
C23—N22—C27—C260.6 (3)C2—C3—C4—C5−0.4 (3)
C23—C24—C25—C260.1 (3)C2—C3—C4—C13179.53 (17)
C23—C24—C25—C34−179.39 (17)C2—C8—C9—C10−176.47 (17)
C23—C29—C30—C31−177.98 (18)C3—C2—C8—N79.0 (2)
C24—C23—C29—N28−2.1 (3)C3—C2—C8—C9−172.87 (17)
C24—C23—C29—C30177.27 (18)C3—C4—C5—C6−0.5 (3)
C24—C25—C26—C27−0.4 (3)C4—C5—C6—N10.9 (3)
C25—C26—C27—N220.0 (3)C6—N1—C2—C3−0.7 (3)
C27—N22—C23—C24−0.9 (3)C6—N1—C2—C8177.53 (16)
C27—N22—C23—C29178.43 (17)N7—C8—C9—C101.5 (3)
N28—C29—C30—C311.4 (3)C8—C2—C3—C4−177.15 (16)
C29—C23—C24—C25−178.73 (17)C8—N7—C12—C111.0 (3)
C29—N28—C33—C321.0 (3)C8—C9—C10—C110.2 (3)
C29—C30—C31—C32−0.2 (3)C9—C10—C11—C12−1.1 (3)
C30—C31—C32—C33−0.5 (3)C10—C11—C12—N70.6 (3)
C31—C32—C33—N280.1 (3)C12—N7—C8—C2176.01 (16)
C33—N28—C29—C23177.68 (16)C12—N7—C8—C9−2.1 (3)
C33—N28—C29—C30−1.7 (3)C13—C4—C5—C6179.59 (17)
C34—C25—C26—C27179.12 (18)C14—C15—C16—C17179.10 (17)
C35—C36—C37—C38179.24 (18)C14—C15—C20—C19179.98 (17)
C35—C36—C40—C39−179.36 (18)C15—C16—C17—C180.9 (3)
C36—C37—C38—C1D−0.5 (3)C16—C15—C20—C19−0.3 (3)
C37—C36—C40—C39−0.3 (3)C16—C17—C18—C19−0.3 (3)
C38—C1D—C39—C40−0.9 (3)C16—C17—C18—C21179.44 (18)
C39—C1D—C38—C370.8 (3)C17—C18—C19—C20−0.6 (3)
C40—C36—C37—C380.2 (3)C18—C19—C20—C150.9 (3)
C41—C1D—C38—C37−179.64 (18)C20—C15—C16—C17−0.6 (3)
C41—C1D—C39—C40179.53 (18)C21—C18—C19—C20179.61 (18)
D—H···AD—HH···AD···AD—H···A
C5—H5···N280.952.533.472 (2)169
C26—H26···N7i0.952.553.487 (3)171
C17H11N3F(000) = 536
Mr = 257.29Dx = 1.248 Mg m3
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 3.7436 (3) ÅCell parameters from 1697 reflections
b = 34.146 (3) Åθ = 3.5–28.7°
c = 10.7528 (9) ŵ = 0.08 mm1
β = 94.799 (8)°T = 100 K
V = 1369.7 (2) Å3Needle, colourless
Z = 40.40 × 0.10 × 0.10 mm
Agilent SuperNova (single source at offset, Eos detector) diffractometer1926 independent reflections
Radiation source: SuperNova (Mo) X-ray Source1645 reflections with I > 2σ(I)
Detector resolution: 15.9631 pixels mm-1Rint = 0.022
ω scansθmax = 23.3°, θmin = 3.1°
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2015)h = −4→4
Tmin = 0.695, Tmax = 1.000k = −37→33
4235 measured reflectionsl = −11→11
Refinement on F20 restraints
Least-squares matrix: fullHydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.083H-atom parameters constrained
wR(F2) = 0.208w = 1/[σ2(Fo2) + (0.0696P)2 + 4.7923P] where P = (Fo2 + 2Fc2)/3
S = 1.15(Δ/σ)max < 0.001
1926 reflectionsΔρmax = 0.44 e Å3
181 parametersΔρmin = −0.29 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
xyzUiso*/Ueq
N10.2656 (9)0.68966 (10)0.2378 (3)0.0167 (8)
C20.4386 (11)0.69652 (11)0.3508 (4)0.0147 (9)
C30.5026 (11)0.73404 (11)0.3962 (4)0.0154 (9)
H30.62080.73780.47700.018*
C40.3928 (11)0.76640 (12)0.3231 (4)0.0150 (9)
C50.2126 (11)0.75954 (12)0.2070 (4)0.0166 (10)
H50.12940.78070.15480.020*
C60.1571 (11)0.72098 (12)0.1693 (4)0.0170 (10)
H60.03430.71650.08970.020*
N70.7312 (9)0.66830 (10)0.5380 (3)0.0168 (8)
C80.5578 (11)0.66142 (11)0.4254 (4)0.0142 (9)
C90.4899 (11)0.62361 (12)0.3803 (4)0.0177 (10)
H90.36680.61970.30040.021*
C100.6034 (12)0.59197 (12)0.4530 (4)0.0187 (10)
H100.55820.56600.42440.022*
C110.7850 (11)0.59893 (12)0.5686 (4)0.0176 (10)
H110.86910.57780.62060.021*
C120.8406 (11)0.63710 (12)0.6063 (4)0.0186 (10)
H120.96460.64160.68570.022*
C130.4658 (11)0.80521 (12)0.3695 (4)0.0150 (9)
C140.5307 (11)0.83770 (12)0.4099 (4)0.0168 (10)
N150.5621 (10)0.94601 (10)0.4131 (3)0.0185 (9)
C160.5068 (11)0.90884 (12)0.3788 (4)0.0176 (10)
H160.39380.90390.29790.021*
C170.6047 (11)0.87675 (11)0.4544 (4)0.0153 (9)
C180.7784 (11)0.88416 (12)0.5721 (4)0.0170 (10)
H180.85650.86320.62580.020*
C190.8344 (11)0.92252 (12)0.6090 (4)0.0197 (10)
H190.94570.92840.68950.024*
C200.7262 (11)0.95225 (12)0.5273 (4)0.0200 (10)
H200.77010.97850.55330.024*
U11U22U33U12U13U23
N10.0152 (19)0.0180 (19)0.0163 (19)−0.0010 (15)−0.0013 (15)−0.0006 (15)
C20.012 (2)0.019 (2)0.013 (2)−0.0016 (18)0.0030 (17)−0.0006 (17)
C30.013 (2)0.019 (2)0.014 (2)−0.0009 (18)0.0014 (18)−0.0006 (17)
C40.011 (2)0.019 (2)0.015 (2)0.0016 (18)0.0023 (17)0.0005 (17)
C50.021 (2)0.017 (2)0.013 (2)−0.0011 (18)0.0048 (18)0.0021 (16)
C60.017 (2)0.021 (2)0.013 (2)0.0005 (18)0.0021 (18)−0.0003 (17)
N70.0190 (19)0.0156 (19)0.016 (2)0.0019 (15)0.0035 (15)0.0008 (14)
C80.014 (2)0.017 (2)0.012 (2)−0.0003 (17)0.0029 (17)−0.0003 (16)
C90.018 (2)0.019 (2)0.016 (2)−0.0015 (18)0.0005 (18)−0.0038 (17)
C100.020 (2)0.012 (2)0.025 (2)−0.0013 (18)0.0066 (19)−0.0031 (18)
C110.014 (2)0.017 (2)0.022 (2)0.0028 (18)0.0035 (19)0.0048 (18)
C120.020 (2)0.021 (2)0.015 (2)0.0047 (18)0.0038 (18)0.0017 (18)
C130.014 (2)0.018 (2)0.013 (2)−0.0015 (18)0.0024 (17)0.0029 (18)
C140.014 (2)0.020 (2)0.016 (2)0.0016 (18)0.0020 (18)0.0024 (18)
N150.024 (2)0.0155 (18)0.016 (2)0.0005 (16)0.0045 (16)0.0019 (14)
C160.015 (2)0.023 (2)0.016 (2)0.0004 (18)0.0068 (18)−0.0005 (18)
C170.016 (2)0.015 (2)0.016 (2)0.0022 (18)0.0057 (18)−0.0006 (17)
C180.014 (2)0.016 (2)0.021 (2)0.0029 (18)0.0018 (18)0.0047 (17)
C190.019 (2)0.021 (2)0.018 (2)−0.0005 (19)−0.0010 (19)−0.0014 (18)
C200.021 (2)0.015 (2)0.024 (3)0.0008 (18)0.003 (2)−0.0004 (18)
N1—C21.348 (5)C10—C111.387 (6)
N1—C61.342 (5)C11—H110.9500
C2—C31.385 (6)C11—C121.375 (6)
C2—C81.490 (6)C12—H120.9500
C3—H30.9500C13—C141.209 (6)
C3—C41.398 (6)C14—C171.436 (6)
C4—C51.388 (6)N15—C161.333 (5)
C4—C131.434 (6)N15—C201.344 (6)
C5—H50.9500C16—H160.9500
C5—C61.388 (6)C16—C171.395 (6)
C6—H60.9500C17—C181.397 (6)
N7—C81.345 (5)C18—H180.9500
N7—C121.338 (5)C18—C191.380 (6)
C8—C91.395 (6)C19—H190.9500
C9—H90.9500C19—C201.381 (6)
C9—C101.379 (6)C20—H200.9500
C10—H100.9500
C6—N1—C2117.1 (3)C11—C10—H10120.7
N1—C2—C3122.3 (4)C10—C11—H11120.7
N1—C2—C8116.4 (3)C12—C11—C10118.5 (4)
C3—C2—C8121.2 (4)C12—C11—H11120.7
C2—C3—H3120.0N7—C12—C11124.1 (4)
C2—C3—C4119.9 (4)N7—C12—H12117.9
C4—C3—H3120.0C11—C12—H12117.9
C3—C4—C13119.8 (4)C14—C13—C4179.1 (4)
C5—C4—C3118.0 (4)C13—C14—C17178.4 (4)
C5—C4—C13122.2 (4)C16—N15—C20116.9 (4)
C4—C5—H5120.9N15—C16—H16118.0
C4—C5—C6118.2 (4)N15—C16—C17124.0 (4)
C6—C5—H5120.9C17—C16—H16118.0
N1—C6—C5124.4 (4)C16—C17—C14120.1 (4)
N1—C6—H6117.8C16—C17—C18117.8 (4)
C5—C6—H6117.8C18—C17—C14122.2 (4)
C12—N7—C8117.2 (3)C17—C18—H18120.7
N7—C8—C2116.4 (3)C19—C18—C17118.7 (4)
N7—C8—C9122.3 (4)C19—C18—H18120.7
C9—C8—C2121.3 (4)C18—C19—H19120.5
C8—C9—H9120.3C18—C19—C20119.1 (4)
C10—C9—C8119.3 (4)C20—C19—H19120.5
C10—C9—H9120.3N15—C20—C19123.5 (4)
C9—C10—H10120.7N15—C20—H20118.2
C9—C10—C11118.6 (4)C19—C20—H20118.2
N1—C2—C3—C4−1.3 (6)C8—N7—C12—C11−0.4 (6)
N1—C2—C8—N7179.9 (3)C8—C9—C10—C11−0.6 (6)
N1—C2—C8—C9−0.5 (6)C9—C10—C11—C120.7 (6)
C2—N1—C6—C50.2 (6)C10—C11—C12—N7−0.2 (7)
C2—C3—C4—C51.7 (6)C12—N7—C8—C2−179.9 (3)
C2—C3—C4—C13−178.8 (4)C12—N7—C8—C90.5 (6)
C2—C8—C9—C10−179.6 (4)C13—C4—C5—C6179.3 (4)
C3—C2—C8—N7−0.4 (6)C14—C17—C18—C19−178.9 (4)
C3—C2—C8—C9179.3 (4)N15—C16—C17—C14179.3 (4)
C3—C4—C5—C6−1.1 (6)N15—C16—C17—C18−1.5 (6)
C4—C5—C6—N10.2 (6)C16—N15—C20—C19−0.6 (6)
C6—N1—C2—C30.4 (6)C16—C17—C18—C191.9 (6)
C6—N1—C2—C8−179.9 (3)C17—C18—C19—C20−1.8 (6)
N7—C8—C9—C100.0 (6)C18—C19—C20—N151.1 (7)
C8—C2—C3—C4178.9 (4)C20—N15—C16—C170.8 (6)
D—H···AD—HH···AD···AD—H···A
C5—H5···N7i0.952.553.475 (5)163
C18—H18···N1ii0.952.603.509 (5)161
C18H13N3Dx = 1.364 Mg m3
Mr = 271.31Melting point = 398–400 K
Monoclinic, P21/cMo Kα radiation, λ = 0.71073 Å
a = 9.6951 (6) ÅCell parameters from 4854 reflections
b = 12.0142 (7) Åθ = 3.5–29.1°
c = 12.0376 (9) ŵ = 0.08 mm1
β = 109.552 (8)°T = 100 K
V = 1321.28 (15) Å3Block, orange
Z = 40.35 × 0.35 × 0.20 mm
F(000) = 568
Agilent SuperNova (single source at offset, Eos detector) diffractometer2692 independent reflections
Radiation source: SuperNova (Mo) X-ray Source2363 reflections with I > 2σ(I)
Mirror monochromatorRint = 0.023
Detector resolution: 15.9631 pixels mm-1θmax = 26.4°, θmin = 2.8°
ω scansh = −12→12
Absorption correction: multi-scan (CrysAlis PRO; Rigaku OD, 2015)k = −13→15
Tmin = 0.993, Tmax = 1.000l = −15→11
8569 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.038Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.095H-atom parameters constrained
S = 1.06w = 1/[σ2(Fo2) + (0.0344P)2 + 0.7137P] where P = (Fo2 + 2Fc2)/3
2692 reflections(Δ/σ)max < 0.001
190 parametersΔρmax = 0.21 e Å3
0 restraintsΔρmin = −0.23 e Å3
Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.
xyzUiso*/Ueq
N10.31593 (11)0.25441 (9)0.52186 (10)0.0149 (2)
C20.25581 (13)0.33233 (11)0.43923 (11)0.0136 (3)
C30.26375 (13)0.44551 (11)0.46516 (11)0.0143 (3)
H30.22410.49820.40390.017*
C40.33001 (13)0.48165 (11)0.58118 (11)0.0140 (3)
C50.39151 (13)0.40081 (11)0.66627 (11)0.0155 (3)
H50.43810.42110.74640.019*
C60.38351 (14)0.29005 (11)0.63189 (11)0.0154 (3)
H60.42900.23610.69040.018*
N70.12564 (12)0.36675 (9)0.23212 (10)0.0173 (3)
C80.17196 (13)0.29055 (11)0.31882 (11)0.0143 (3)
C90.14054 (14)0.17732 (11)0.29891 (12)0.0169 (3)
H90.17370.12530.36170.020*
C100.06031 (14)0.14199 (11)0.18635 (12)0.0186 (3)
H100.03850.06530.17090.022*
C110.01227 (14)0.21922 (12)0.09662 (12)0.0183 (3)
H11−0.04280.19710.01860.022*
C120.04713 (14)0.33039 (12)0.12420 (12)0.0181 (3)
H120.01330.38380.06280.022*
N130.25953 (12)0.93647 (9)0.65298 (10)0.0172 (3)
H130.22040.97450.69740.021*
C140.31571 (14)0.98129 (11)0.57170 (12)0.0182 (3)
H140.31841.05850.55530.022*
C150.36687 (14)0.89859 (11)0.51831 (12)0.0170 (3)
H150.41120.90760.45940.020*
C160.34102 (13)0.79562 (11)0.56791 (11)0.0143 (3)
C170.36292 (13)0.68330 (11)0.54613 (11)0.0142 (3)
H170.40450.66370.48770.017*
C180.32337 (13)0.60125 (11)0.61069 (11)0.0139 (3)
C190.26479 (14)0.63113 (11)0.69974 (11)0.0149 (3)
H190.24290.57420.74600.018*
C200.23857 (14)0.74072 (11)0.72121 (11)0.0156 (3)
H200.19740.75970.78010.019*
C210.27468 (13)0.82248 (11)0.65331 (11)0.0146 (3)
U11U22U33U12U13U23
N10.0145 (5)0.0133 (5)0.0168 (6)0.0003 (4)0.0051 (4)0.0009 (4)
C20.0121 (6)0.0143 (6)0.0149 (6)0.0002 (5)0.0054 (5)0.0004 (5)
C30.0150 (6)0.0130 (6)0.0143 (6)0.0006 (5)0.0040 (5)0.0019 (5)
C40.0121 (6)0.0140 (6)0.0169 (7)−0.0011 (5)0.0061 (5)0.0003 (5)
C50.0132 (6)0.0176 (7)0.0143 (6)−0.0012 (5)0.0026 (5)−0.0004 (5)
C60.0138 (6)0.0148 (6)0.0167 (6)0.0018 (5)0.0041 (5)0.0035 (5)
N70.0182 (5)0.0159 (6)0.0166 (6)−0.0010 (4)0.0045 (4)0.0009 (5)
C80.0132 (6)0.0148 (6)0.0158 (6)0.0007 (5)0.0060 (5)−0.0003 (5)
C90.0165 (6)0.0142 (7)0.0193 (7)0.0014 (5)0.0050 (5)0.0006 (5)
C100.0146 (6)0.0155 (7)0.0244 (7)−0.0004 (5)0.0050 (5)−0.0052 (6)
C110.0133 (6)0.0244 (7)0.0165 (7)−0.0009 (5)0.0039 (5)−0.0053 (6)
C120.0183 (6)0.0196 (7)0.0156 (7)0.0005 (5)0.0044 (5)0.0018 (5)
N130.0210 (6)0.0122 (6)0.0171 (6)0.0021 (5)0.0049 (4)−0.0019 (4)
C140.0223 (7)0.0124 (6)0.0164 (7)−0.0016 (5)0.0017 (5)0.0015 (5)
C150.0208 (6)0.0147 (6)0.0142 (6)−0.0029 (5)0.0040 (5)0.0010 (5)
C160.0134 (6)0.0151 (6)0.0118 (6)−0.0013 (5)0.0007 (5)−0.0005 (5)
C170.0137 (6)0.0145 (6)0.0133 (6)−0.0003 (5)0.0031 (5)−0.0015 (5)
C180.0118 (6)0.0143 (6)0.0130 (6)−0.0001 (5)0.0009 (5)−0.0009 (5)
C190.0161 (6)0.0149 (6)0.0128 (6)−0.0024 (5)0.0036 (5)0.0007 (5)
C200.0153 (6)0.0184 (7)0.0133 (6)−0.0003 (5)0.0050 (5)−0.0018 (5)
C210.0140 (6)0.0128 (6)0.0141 (6)0.0003 (5)0.0006 (5)−0.0025 (5)
N1—C21.3481 (17)C11—C121.3904 (19)
N1—C61.3365 (17)C12—H120.9500
C2—C31.3915 (18)N13—H130.8800
C2—C81.4916 (18)N13—C141.3786 (18)
C3—H30.9500N13—C211.3773 (17)
C3—C41.3969 (18)C14—H140.9500
C4—C51.3925 (18)C14—C151.3637 (19)
C4—C181.4867 (18)C15—H150.9500
C5—H50.9500C15—C161.4318 (18)
C5—C61.3880 (18)C16—C171.4043 (18)
C6—H60.9500C16—C211.4202 (18)
N7—C81.3473 (17)C17—H170.9500
N7—C121.3401 (17)C17—C181.3864 (18)
C8—C91.3972 (18)C18—C191.4170 (18)
C9—H90.9500C19—H190.9500
C9—C101.3841 (19)C19—C201.3817 (18)
C10—H100.9500C20—H200.9500
C10—C111.381 (2)C20—C211.3953 (19)
C11—H110.9500
C6—N1—C2117.14 (11)N7—C12—H12118.0
N1—C2—C3122.36 (12)C11—C12—H12118.0
N1—C2—C8116.34 (11)C14—N13—H13125.6
C3—C2—C8121.20 (11)C21—N13—H13125.6
C2—C3—H3120.0C21—N13—C14108.87 (11)
C2—C3—C4120.03 (12)N13—C14—H14125.0
C4—C3—H3120.0C15—C14—N13110.02 (12)
C3—C4—C18119.81 (11)C15—C14—H14125.0
C5—C4—C3117.33 (12)C14—C15—H15126.5
C5—C4—C18122.72 (12)C14—C15—C16106.91 (12)
C4—C5—H5120.6C16—C15—H15126.5
C6—C5—C4118.81 (12)C17—C16—C15133.94 (12)
C6—C5—H5120.6C17—C16—C21119.13 (12)
N1—C6—C5124.24 (12)C21—C16—C15106.88 (11)
N1—C6—H6117.9C16—C17—H17120.3
C5—C6—H6117.9C18—C17—C16119.41 (12)
C12—N7—C8117.60 (12)C18—C17—H17120.3
N7—C8—C2117.13 (11)C17—C18—C4120.74 (12)
N7—C8—C9122.12 (12)C17—C18—C19120.00 (12)
C9—C8—C2120.73 (12)C19—C18—C4119.07 (11)
C8—C9—H9120.5C18—C19—H19119.1
C10—C9—C8119.03 (13)C20—C19—C18121.89 (12)
C10—C9—H9120.5C20—C19—H19119.1
C9—C10—H10120.3C19—C20—H20121.2
C11—C10—C9119.44 (13)C19—C20—C21117.60 (12)
C11—C10—H10120.3C21—C20—H20121.2
C10—C11—H11121.1N13—C21—C16107.31 (11)
C10—C11—C12117.85 (12)N13—C21—C20130.87 (12)
C12—C11—H11121.1C20—C21—C16121.82 (12)
N7—C12—C11123.95 (13)
N1—C2—C3—C4−2.97 (19)C10—C11—C12—N70.7 (2)
N1—C2—C8—N7−172.50 (11)C12—N7—C8—C2−178.40 (11)
N1—C2—C8—C99.08 (17)C12—N7—C8—C90.00 (19)
C2—N1—C6—C52.00 (19)N13—C14—C15—C160.34 (15)
C2—C3—C4—C52.62 (18)C14—N13—C21—C16−0.78 (14)
C2—C3—C4—C18−173.06 (11)C14—N13—C21—C20178.21 (13)
C2—C8—C9—C10178.90 (12)C14—C15—C16—C17176.75 (14)
C3—C2—C8—N710.94 (18)C14—C15—C16—C21−0.80 (14)
C3—C2—C8—C9−167.48 (12)C15—C16—C17—C18−179.18 (13)
C3—C4—C5—C6−0.18 (18)C15—C16—C21—N130.97 (14)
C3—C4—C18—C17−50.68 (17)C15—C16—C21—C20−178.13 (11)
C3—C4—C18—C19124.26 (13)C16—C17—C18—C4173.34 (11)
C4—C5—C6—N1−2.2 (2)C16—C17—C18—C19−1.55 (18)
C4—C18—C19—C20−171.75 (11)C17—C16—C21—N13−177.02 (11)
C5—C4—C18—C17133.88 (13)C17—C16—C21—C203.88 (18)
C5—C4—C18—C19−51.18 (17)C17—C18—C19—C203.23 (19)
C6—N1—C2—C30.64 (18)C18—C4—C5—C6175.36 (11)
C6—N1—C2—C8−175.87 (11)C18—C19—C20—C21−1.27 (19)
N7—C8—C9—C100.56 (19)C19—C20—C21—N13178.86 (13)
C8—C2—C3—C4173.38 (11)C19—C20—C21—C16−2.28 (18)
C8—N7—C12—C11−0.6 (2)C21—N13—C14—C150.28 (15)
C8—C9—C10—C11−0.48 (19)C21—C16—C17—C18−1.86 (18)
C9—C10—C11—C12−0.12 (19)
D—H···AD—HH···AD···AD—H···A
N13—H13···N7i0.882.223.002 (2)148
C14—H14···N1ii0.952.393.336 (2)176
C5—H5···Cg1iii0.952.583.3371 (14)137
C6—H6···Cg4iii0.952.783.5268 (14)136
C11—H11···Cg4iv0.952.563.3548 (15)141
C17—H17···Cg2v0.952.853.6555 (15)143
C20—H20···Cg3vi0.952.863.5814 (16)133
  18 in total

1.  Recent advances in sensitized mesoscopic solar cells.

Authors:  Michael Grätzel
Journal:  Acc Chem Res       Date:  2009-11-17       Impact factor: 22.384

2.  Base-enhanced catalytic water oxidation by a carboxylate-bipyridine Ru(II) complex.

Authors:  Na Song; Javier J Concepcion; Robert A Binstead; Jennifer A Rudd; Aaron K Vannucci; Christopher J Dares; Michael K Coggins; Thomas J Meyer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-06       Impact factor: 11.205

3.  Nanomaterials for renewable energy production and storage.

Authors:  Xiaobo Chen; Can Li; Michaël Grätzel; Robert Kostecki; Samuel S Mao
Journal:  Chem Soc Rev       Date:  2012-12-07       Impact factor: 54.564

4.  Bipyridine: the most widely used ligand. A review of molecules comprising at least two 2,2'-bipyridine units.

Authors:  C Kaes; A Katz; M W Hosseini
Journal:  Chem Rev       Date:  2000-10-11       Impact factor: 60.622

5.  Stacking patterns of thieno[3,2-b]thiophenes functionalized by sequential palladium-catalyzed Suzuki and Heck cross-coupling reactions.

Authors:  Hien Nguyen; Ngan Nguyen Bich; Tung T Dang; Luc Van Meervelt
Journal:  Acta Crystallogr C Struct Chem       Date:  2014-08-27       Impact factor: 1.172

6.  Self-discriminating and hierarchical assembly of racemic binaphthyl-bisbipyridines and silver ions: from metallocycles to gel nanofibers.

Authors:  Yabing He; Zheng Bian; Chuanqing Kang; Lianxun Gao
Journal:  Chem Commun (Camb)       Date:  2010-11-29       Impact factor: 6.222

7.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

8.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

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Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
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