Literature DB >> 28435731

Crystal structure and absolute configuration of (4S,5R,6S)-4,5,6-trihy-droxy-3-methyl-cyclo-hex-2-enone (gabosine H).

Gaurao D Tibhe1, Mario A Macías2, Enrique Pandolfi1, Valeria Schapiro1, Leopoldo Suescun3.   

Abstract

The mol-ecule of the title keto carbasugar, C7H10O4, is formed by a cyclo-hexene skeleton with an envelope conformation, substituted by carbonyl, methyl and hydroxyl groups. The crystal structure is controlled mainly by a combination of strong O-H⋯O and weak C-H⋯O hydrogen bonds, forming nearly perpendicular chains running parallel to the [110] and [-110] directions. This perpendicularity is caused by a tetra-gonal pseudosymmetry influenced by the similarity between the a and b axes, the value of 90.9770 (10)° of the β angle and the action of a 21 screw axis, which transform each chain into its corresponding nearly orthogonal one.

Entities:  

Keywords:  Mitsunobu inversion reaction; absolute configuration; crystal structure; natural product

Year:  2017        PMID: 28435731      PMCID: PMC5382632          DOI: 10.1107/S2056989017004509

Source DB:  PubMed          Journal:  Acta Crystallogr E Crystallogr Commun


  7 in total

1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

2.  KD16-U1, a new metabolite of Streptomyces: isolation and structural studies.

Authors:  K Tatsuta; T Tsuchiya; N Mikami; S Umezawa; H Umezawa; H Naganawa
Journal:  J Antibiot (Tokyo)       Date:  1974-08       Impact factor: 2.649

3.  Determination of absolute structure using Bayesian statistics on Bijvoet differences.

Authors:  Rob W W Hooft; Leo H Straver; Anthony L Spek
Journal:  J Appl Crystallogr       Date:  2008-01-16       Impact factor: 3.304

4.  Crystal structure refinement with SHELXL.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr C Struct Chem       Date:  2015-01-01       Impact factor: 1.172

5.  Use of intensity quotients and differences in absolute structure refinement.

Authors:  Simon Parsons; Howard D Flack; Trixie Wagner
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2013-05-17

6.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20

7.  The Cambridge Structural Database.

Authors:  Colin R Groom; Ian J Bruno; Matthew P Lightfoot; Suzanna C Ward
Journal:  Acta Crystallogr B Struct Sci Cryst Eng Mater       Date:  2016-04-01
  7 in total

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