| Literature DB >> 28435723 |
Andrey A Petrov1, Eugene A Goodilin1,2, Alexey B Tarasov1,2, Vladimir A Lazarenko3, Pavel V Dorovatovskii3, Victor N Khrustalev4,5.
Abstract
At a temperature of 100 K, CH5N2+·I- (I), crystallizes in the monoclinic space group P21/c. The formamidinium cation adopts a planar symmetrical structure [the r.m.s. deviation is 0.002 Å, and the C-N bond lengths are 1.301 (7) and 1.309 (8) Å]. The iodide anion does not lie within the cation plane, but deviates from it by 0.643 (10) Å. The cation and anion of I form a tight ionic pair by a strong N-H⋯I hydrogen bond. In the crystal of I, the tight ionic pairs form hydrogen-bonded zigzag-like chains propagating toward [20-1] via strong N-H⋯I hydrogen bonds. The hydrogen-bonded chains are further packed in stacks along [100]. The thermal behaviour of I was studied by different physicochemical methods (thermogravimetry, differential scanning calorimetry and powder diffraction). Differential scanning calorimetry revealed three narrow endothermic peaks at 346, 387 and 525 K, and one broad endothermic peak at ∼605 K. The first and second peaks are related to solid-solid phase transitions, while the third and fourth peaks are attributed to the melting and decomposition of I. The enthalpies of the phase transitions at 346 and 387 K are estimated as 2.60 and 2.75 kJ mol-1, respectively. The X-ray powder diffraction data collected at different temperatures indicate the existence of I as the monoclinic (100-346 K), ortho-rhom-bic (346-387 K) and cubic (387-525 K) polymorphic modifications.Entities:
Keywords: crystal structure; formamidinium iodide; phase transitions; powder diffraction; synchrotron radiation
Year: 2017 PMID: 28435723 PMCID: PMC5382624 DOI: 10.1107/S205698901700425X
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1The molecular structure of salt I. Displacement ellipsoids are shown at the 50% probability level. H atoms are presented as small spheres of arbitrary radius. Dashed line indicates the intermolecular N—H⋯I hydrogen bond.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| N1—H1 | 0.90 | 2.77 | 3.612 (5) | 156 |
| N2—H2 | 0.90 | 2.74 | 3.622 (4) | 166 |
Symmetry code: (i) .
Figure 2Thermogravimetry and differential scanning calorimetry analyses for I.
Figure 3X-ray powder diffraction data for I at different temperatures.
Figure 4The crystal structure of I demonstrating the hydrogen-bonded zigzag-like chains propagating toward [20]. Dashed lines indicate the intermolecular N—H⋯I hydrogen bonds.
Experimental details
| Crystal data | |
| Chemical formula | CH5N2 +·I− |
|
| 171.97 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 100 |
|
| 4.8211 (6), 13.776 (3), 7.0113 (10) |
| β (°) | 98.06 (3) |
|
| 461.06 (14) |
|
| 4 |
| Radiation type | Synchrotron, λ = 0.96990 Å |
| μ (mm−1) | 15.38 |
| Crystal size (mm) | 0.06 × 0.05 × 0.03 |
| Data collection | |
| Diffractometer | Rayonix SX165 CCD |
| Absorption correction | Multi-scan ( |
|
| 0.400, 0.600 |
| No. of measured, independent and observed [ | 5111, 949, 894 |
|
| 0.070 |
| (sin θ/λ)max (Å−1) | 0.642 |
| Refinement | |
|
| 0.039, 0.093, 1.06 |
| No. of reflections | 949 |
| No. of parameters | 38 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 0.87, −0.91 |
Computer programs: Marccd (Doyle, 2011 ▸), iMosflm (Battye et al., 2011 ▸), SHELXT (Sheldrick, 2015a ▸), SHELXL2014 (Sheldrick, 2015b ▸) and SHELXTL (Sheldrick, 2008 ▸).
| CH5N2+·I− | |
| Monoclinic, | Synchrotron radiation, λ = 0.96990 Å |
| Cell parameters from 600 reflections | |
| θ = 4.0–36.0° | |
| µ = 15.38 mm−1 | |
| β = 98.06 (3)° | |
| Prism, colourless | |
| 0.06 × 0.05 × 0.03 mm |
| Rayonix SX165 CCD diffractometer | 894 reflections with |
| φ scan | |
| Absorption correction: multi-scan (Scala; Evans, 2006) | θmax = 38.5°, θmin = 4.0° |
| 5111 measured reflections | |
| 949 independent reflections |
| Refinement on | Secondary atom site location: difference Fourier map |
| Least-squares matrix: full | Hydrogen site location: mixed |
| H-atom parameters constrained | |
| (Δ/σ)max < 0.001 | |
| 949 reflections | Δρmax = 0.87 e Å−3 |
| 38 parameters | Δρmin = −0.91 e Å−3 |
| 0 restraints | Extinction correction: SHELXL2014 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| Primary atom site location: difference Fourier map | Extinction coefficient: 0.0064 (11) |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| I1 | 0.86658 (6) | 0.38577 (2) | 0.20022 (5) | 0.0218 (2) | |
| N1 | 0.6120 (9) | 0.4171 (3) | 0.6569 (7) | 0.0250 (10) | |
| H1A | 0.7250 | 0.4174 | 0.5650 | 0.030* | |
| H1B | 0.6251 | 0.4648 | 0.7454 | 0.030* | |
| N2 | 0.2540 (9) | 0.3389 (3) | 0.7860 (7) | 0.0254 (11) | |
| H2A | 0.1352 | 0.2882 | 0.7776 | 0.030* | |
| H2B | 0.2515 | 0.3832 | 0.8801 | 0.030* | |
| C1 | 0.4296 (11) | 0.3478 (4) | 0.6606 (8) | 0.0227 (11) | |
| H1 | 0.4233 | 0.2994 | 0.5637 | 0.027* |
| I1 | 0.0230 (3) | 0.0215 (3) | 0.0217 (4) | 0.00012 (9) | 0.0054 (2) | −0.00041 (10) |
| N1 | 0.022 (2) | 0.030 (2) | 0.023 (3) | −0.0030 (18) | 0.0030 (19) | 0.000 (2) |
| N2 | 0.021 (2) | 0.022 (2) | 0.034 (3) | −0.0020 (17) | 0.008 (2) | 0.0011 (19) |
| C1 | 0.023 (2) | 0.026 (3) | 0.019 (3) | 0.002 (2) | 0.001 (2) | 0.000 (2) |
| N1—C1 | 1.301 (7) | N2—H2A | 0.8999 |
| N1—H1A | 0.9001 | N2—H2B | 0.9000 |
| N1—H1B | 0.9001 | C1—H1 | 0.9500 |
| N2—C1 | 1.309 (8) | ||
| C1—N1—H1A | 119.7 | H2A—N2—H2B | 120.0 |
| C1—N1—H1B | 120.3 | N1—C1—N2 | 125.8 (5) |
| H1A—N1—H1B | 120.0 | N1—C1—H1 | 117.1 |
| C1—N2—H2A | 119.7 | N2—C1—H1 | 117.1 |
| C1—N2—H2B | 120.3 |
| H··· | ||||
| N1—H1 | 0.90 | 2.77 | 3.612 (5) | 156 |
| N2—H2 | 0.90 | 2.74 | 3.622 (4) | 166 |