| Literature DB >> 28435716 |
Nicholas S Kim1, Dasan M Thamattoor1.
Abstract
The synthesis and crystal structure of the title compound, C14H8Br2, is described. The mol-ecule is positioned on a twofold rotation axis and the asymmetric unit consists of half a mol-ecule with the other half being generated by symmetry. The presence of two large bromine atoms in the bay region significantly distorts the mol-ecule from planarity and the mean planes of the two terminal rings of the phenanthrene system are twisted away from each other by 28.51 (14)°. The torsion angle between the two C-Br bonds is 74.70 (14)° and the distance between the two Br atoms is 3.2777 (13) Å. The mol-ecules pack in layers in the crystal, with the centroids of the central rings of the phenanthrene units in adjacent layers separated by a distance of 4.0287 (10) Å. These centroids are shifted by 2.266 (6) Å relative to each other, indicating slippage in the stacking arrangement. Furthermore, the distance between the centroids of the terminal and central rings of the phenanthrene units in adjacent layers is slightly shorter at 3.7533 (19) Å. While all of the mol-ecules within each layer are oriented in the same direction, those in adjacent layers are oriented in the opposite direction, leading to anti-parallel stacks.Entities:
Keywords: crystal structure; helical molecule; polycyclic aromatic hydrocarbon
Year: 2017 PMID: 28435716 PMCID: PMC5382617 DOI: 10.1107/S2056989017003863
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1Synthesis of 4,5-dibromophenanthrene (2).
Figure 2Crystal structure of 2 with displacement ellipsoids shown at the 50% probability level. H atoms omitted for clarity. [Symmetry code: (’) 1 − x, + y, − z].
A comparison of selected structural parameters (Å, °) in a series of known 4,5-dihalophenanthrene derivatives
Refer to Fig. 3 ▸ for parameters used in this table.
| Compound | angle between rings |
| C4—C4′—C5′—C5 torsion angle |
|
|---|---|---|---|---|
|
| 16.779 | 2.381 | 19.954 | 43.273 |
|
| 32.282 | 3.097 | 37.738 | 69.980 |
|
| 28.51 (14) | 3.277 (13) | 32.8 (6) | 74.70 (14) |
|
| 29.451 | 3.610 | 33.716 | 78.611 |
Notes: (a) Cosmo et al. (1987b ▸); (b) this work; (c) Cosmo et al. 1987(a); (d) Bock et al. (1998 ▸).
Figure 3The 4,5-dihalo derivatives of phenanthrene shown with conventional chemical numbering. This figure is used as a reference for the data in Table 1 ▸.
Figure 4Crystal packing of 2 when viewed along the b axis. The separation between the centroids of the middle rings (blue spheres) is slightly longer than that between the centroids of the middle and terminal rings (blue and orange spheres) in adjacent layers. Close contacts are also observed between equivalent carbon atoms in the terminal rings (shown in green) that are offset from each other. All lengths are in Å.
Figure 5Crystal packing of 2 when viewed along the a axis, showing the opposite orientation of molecules in alternating layers.
Experimental details
| Crystal data | |
| Chemical formula | C14H8Br2 |
|
| 336.02 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 173 |
|
| 16.840 (3), 8.6112 (16), 8.1418 (15) |
| β (°) | 103.735 (2) |
|
| 1146.9 (4) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 7.03 |
| Crystal size (mm) | 0.25 × 0.11 × 0.07 |
| Data collection | |
| Diffractometer | Bruker D8 QUEST ECO |
| Absorption correction | Multi-scan ( |
|
| 0.47, 0.64 |
| No. of measured, independent and observed [ | 4708, 1203, 1070 |
|
| 0.033 |
| (sin θ/λ)max (Å−1) | 0.634 |
| Refinement | |
|
| 0.030, 0.083, 1.06 |
| No. of reflections | 1203 |
| No. of parameters | 73 |
| H-atom treatment | H-atom parameters constrained |
| Δρmax, Δρmin (e Å−3) | 1.01, −0.35 |
Computer programs: APEX3 (Bruker, 2016 ▸), SAINT (Bruker, 2015 ▸), SHELXS2013 (Sheldrick, 2008 ▸), SHELXL2014 (Sheldrick, 2015 ▸), OLEX2 (Dolomanov et al., 2009 ▸) and publCIF (Westrip, 2010 ▸).
| C14H8Br2 | |
| Monoclinic, | Mo |
| Cell parameters from 3136 reflections | |
| θ = 2.5–26.8° | |
| µ = 7.03 mm−1 | |
| β = 103.735 (2)° | |
| Block, clear colourless | |
| 0.25 × 0.11 × 0.07 mm |
| Bruker D8 QUEST ECO diffractometer | 1203 independent reflections |
| Radiation source: sealed tube, Siemens KFFMO2K-90C | 1070 reflections with |
| Curved graphite monochromator | |
| Detector resolution: 8.3660 pixels mm-1 | θmax = 26.8°, θmin = 2.5° |
| ω and φ scans | |
| Absorption correction: multi-scan (SADABS; Krause | |
| 4708 measured reflections |
| Refinement on | 0 restraints |
| Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
| H-atom parameters constrained | |
| (Δ/σ)max = 0.005 | |
| 1203 reflections | Δρmax = 1.01 e Å−3 |
| 73 parameters | Δρmin = −0.35 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Br1 | 0.41183 (2) | 0.94243 (3) | 0.60761 (4) | 0.03791 (16) | |
| C1 | 0.35716 (18) | 0.4938 (4) | 0.8748 (4) | 0.0403 (7) | |
| H1 | 0.34 | 0.3985 | 0.914 | 0.048* | |
| C2 | 0.31143 (18) | 0.6255 (4) | 0.8762 (4) | 0.0440 (7) | |
| H2 | 0.2652 | 0.6234 | 0.9242 | 0.053* | |
| C3 | 0.33332 (16) | 0.7628 (4) | 0.8065 (4) | 0.0384 (6) | |
| H3 | 0.2992 | 0.8517 | 0.7974 | 0.046* | |
| C5 | 0.45980 (15) | 0.6426 (3) | 0.7686 (3) | 0.0295 (6) | |
| C4 | 0.40447 (15) | 0.7692 (3) | 0.7508 (3) | 0.0313 (5) | |
| C6 | 0.42910 (17) | 0.4984 (3) | 0.8160 (3) | 0.0332 (6) | |
| C7 | 0.46876 (18) | 0.3558 (3) | 0.7880 (4) | 0.0400 (7) | |
| H7 | 0.4503 | 0.2602 | 0.8239 | 0.048* |
| Br1 | 0.0421 (2) | 0.0281 (2) | 0.0447 (2) | 0.00648 (10) | 0.01255 (15) | 0.00529 (10) |
| C1 | 0.0409 (16) | 0.0388 (16) | 0.0393 (16) | −0.0115 (14) | 0.0055 (12) | 0.0039 (13) |
| C2 | 0.0334 (14) | 0.055 (2) | 0.0458 (17) | −0.0090 (14) | 0.0138 (12) | −0.0033 (14) |
| C3 | 0.0327 (13) | 0.0406 (16) | 0.0411 (15) | 0.0008 (12) | 0.0073 (11) | −0.0026 (12) |
| C5 | 0.0313 (12) | 0.0261 (13) | 0.0296 (13) | −0.0020 (10) | 0.0041 (10) | −0.0016 (9) |
| C4 | 0.0336 (13) | 0.0275 (13) | 0.0323 (12) | −0.0021 (10) | 0.0069 (10) | −0.0008 (10) |
| C6 | 0.0361 (14) | 0.0290 (14) | 0.0309 (13) | −0.0031 (12) | 0.0006 (11) | 0.0027 (11) |
| C7 | 0.0508 (17) | 0.0229 (13) | 0.0420 (16) | −0.0040 (11) | 0.0027 (13) | 0.0012 (11) |
| Br1—C4 | 1.916 (3) | C3—H3 | 0.95 |
| C1—C2 | 1.373 (5) | C5—C4 | 1.419 (4) |
| C1—C6 | 1.405 (4) | C5—C6 | 1.433 (4) |
| C1—H1 | 0.95 | C5—C5i | 1.456 (5) |
| C2—C3 | 1.398 (5) | C6—C7 | 1.441 (4) |
| C2—H2 | 0.95 | C7—C7i | 1.341 (6) |
| C3—C4 | 1.379 (4) | C7—H7 | 0.95 |
| C2—C1—C6 | 120.7 (3) | C6—C5—C5i | 117.96 (17) |
| C2—C1—H1 | 119.6 | C3—C4—C5 | 122.5 (3) |
| C6—C1—H1 | 119.6 | C3—C4—Br1 | 114.7 (2) |
| C1—C2—C3 | 119.5 (3) | C5—C4—Br1 | 121.6 (2) |
| C1—C2—H2 | 120.2 | C1—C6—C5 | 120.8 (3) |
| C3—C2—H2 | 120.2 | C1—C6—C7 | 120.0 (3) |
| C4—C3—C2 | 120.0 (3) | C5—C6—C7 | 119.0 (3) |
| C4—C3—H3 | 120.0 | C7i—C7—C6 | 121.13 (18) |
| C2—C3—H3 | 120.0 | C7i—C7—H7 | 119.4 |
| C4—C5—C6 | 115.0 (2) | C6—C7—H7 | 119.4 |
| C4—C5—C5i | 126.84 (17) | ||
| C6—C1—C2—C3 | 4.9 (4) | C2—C1—C6—C5 | 4.9 (4) |
| C1—C2—C3—C4 | −5.9 (4) | C2—C1—C6—C7 | −169.4 (3) |
| C2—C3—C4—C5 | −3.1 (4) | C4—C5—C6—C1 | −13.0 (4) |
| C2—C3—C4—Br1 | 164.5 (2) | C5i—C5—C6—C1 | 171.6 (3) |
| C6—C5—C4—C3 | 12.2 (4) | C4—C5—C6—C7 | 161.3 (2) |
| C5i—C5—C4—C3 | −172.8 (3) | C5i—C5—C6—C7 | −14.1 (4) |
| C6—C5—C4—Br1 | −154.6 (2) | C1—C6—C7—C7i | 171.4 (3) |
| C5i—C5—C4—Br1 | 20.4 (4) | C5—C6—C7—C7i | −2.9 (5) |