Literature DB >> 28433608

Toward biotechnology in space: High-throughput instruments for in situ biological research beyond Earth.

Fathi Karouia1, Kianoosh Peyvan2, Andrew Pohorille3.   

Abstract

Space biotechnology is a nascent field aimed at applying tools of modern biology to advance our goals in space exploration. These advances rely on our ability to exploit in situ high throughput techniques for amplification and sequencing DNA, and measuring levels of RNA transcripts, proteins and metabolites in a cell. These techniques, collectively known as "omics" techniques have already revolutionized terrestrial biology. A number of on-going efforts are aimed at developing instruments to carry out "omics" research in space, in particular on board the International Space Station and small satellites. For space applications these instruments require substantial and creative reengineering that includes automation, miniaturization and ensuring that the device is resistant to conditions in space and works independently of the direction of the gravity vector. Different paths taken to meet these requirements for different "omics" instruments are the subjects of this review. The advantages and disadvantages of these instruments and technological solutions and their level of readiness for deployment in space are discussed. Considering that effects of space environments on terrestrial organisms appear to be global, it is argued that high throughput instruments are essential to advance (1) biomedical and physiological studies to control and reduce space-related stressors on living systems, (2) application of biology to life support and in situ resource utilization, (3) planetary protection, and (4) basic research about the limits on life in space. It is also argued that carrying out measurements in situ provides considerable advantages over the traditional space biology paradigm that relies on post-flight data analysis. Published by Elsevier Inc.

Keywords:  Biotechnology; Exploration; Genomics; High-throughput; Metabolomics; Microarray; Omics; Spaceflight; Transcriptomics, Proteomics

Mesh:

Year:  2017        PMID: 28433608     DOI: 10.1016/j.biotechadv.2017.04.003

Source DB:  PubMed          Journal:  Biotechnol Adv        ISSN: 0734-9750            Impact factor:   14.227


  10 in total

1.  Diagnostics in space: will zero gravity add weight to new advances?

Authors:  Season Wong
Journal:  Expert Rev Mol Diagn       Date:  2019-12-02       Impact factor: 5.225

2.  Absence of increased genomic variants in the cyanobacterium Chroococcidiopsis exposed to Mars-like conditions outside the space station.

Authors:  Alessandro Napoli; Diego Micheletti; Massimo Pindo; Simone Larger; Alessandro Cestaro; Jean-Pierre de Vera; Daniela Billi
Journal:  Sci Rep       Date:  2022-05-19       Impact factor: 4.996

3.  The effects of combined environmental factors on the intestinal flora of mice based on ground simulation experiments.

Authors:  Peiming Sun; Jiaqi Yang; Bo Wang; Huan Ma; Yin Zhang; Jinhu Guo; Xiaoping Chen; Jianwei Zhao; Hongwei Sun; Jianwu Yang; Heming Yang; Yan Cui
Journal:  Sci Rep       Date:  2021-05-31       Impact factor: 4.379

Review 4.  Effects of spaceflight and simulated microgravity on microbial growth and secondary metabolism.

Authors:  Bing Huang; Dian-Geng Li; Ying Huang; Chang-Ting Liu
Journal:  Mil Med Res       Date:  2018-05-14

Review 5.  Advances in space microbiology.

Authors:  Swati Bijlani; Elisa Stephens; Nitin Kumar Singh; Kasthuri Venkateswaran; Clay C C Wang
Journal:  iScience       Date:  2021-04-03

6.  Investigation of Spaceflight Induced Changes to Astronaut Microbiomes.

Authors:  Michael D Morrison; James B Thissen; Fathi Karouia; Satish Mehta; Camilla Urbaniak; Kasthuri Venkateswaran; David J Smith; Crystal Jaing
Journal:  Front Microbiol       Date:  2021-06-02       Impact factor: 5.640

7.  Unbiased Strain-Typing of Arbovirus Directly from Mosquitoes Using Nanopore Sequencing: A Field-forward Biosurveillance Protocol.

Authors:  Joseph A Russell; Brittany Campos; Jennifer Stone; Erik M Blosser; Nathan Burkett-Cadena; Jonathan L Jacobs
Journal:  Sci Rep       Date:  2018-04-03       Impact factor: 4.379

8.  Integrated RNA-seq Analysis Indicates Asynchrony in Clock Genes between Tissues under Spaceflight.

Authors:  Shin-Ichiro Fujita; Lindsay Rutter; Quang Ong; Masafumi Muratani
Journal:  Life (Basel)       Date:  2020-09-11

Review 9.  The influence of spaceflight and simulated microgravity on bacterial motility and chemotaxis.

Authors:  Jacqueline M Acres; Myka Jaap Youngapelian; Jay Nadeau
Journal:  NPJ Microgravity       Date:  2021-02-22       Impact factor: 4.415

10.  A Microbial Monitoring System Demonstrated on the International Space Station Provides a Successful Platform for Detection of Targeted Microorganisms.

Authors:  Christina L M Khodadad; Cherie M Oubre; Victoria A Castro; Stephanie M Flint; Monsi C Roman; Charlie Mark Ott; Cory J Spern; Mary E Hummerick; Gretchen J Maldonado Vazquez; Michele N Birmele; Quinn Whitlock; Matt Scullion; Christina M Flowers; Raymond M Wheeler; Orlando Melendez
Journal:  Life (Basel)       Date:  2021-05-27
  10 in total

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