Literature DB >> 28432256

Global Sensitivity Analysis of OnGuard Models Identifies Key Hubs for Transport Interaction in Stomatal Dynamics.

Silvere Vialet-Chabrand1,2,3,4, Adrian Hills1,2,3,4, Yizhou Wang1,2,3,4, Howard Griffiths1,2,3,4, Virgilio L Lew1,2,3,4, Tracy Lawson1,2,3,4, Michael R Blatt5,6,7,8, Simon Rogers1,2,3,4.   

Abstract

The physical requirement for charge to balance across biological membranes means that the transmembrane transport of each ionic species is interrelated, and manipulating solute flux through any one transporter will affect other transporters at the same membrane, often with unforeseen consequences. The OnGuard systems modeling platform has helped to resolve the mechanics of stomatal movements, uncovering previously unexpected behaviors of stomata. To date, however, the manual approach to exploring model parameter space has captured little formal information about the emergent connections between parameters that define the most interesting properties of the system as a whole. Here, we introduce global sensitivity analysis to identify interacting parameters affecting a number of outputs commonly accessed in experiments in Arabidopsis (Arabidopsis thaliana). The analysis highlights synergies between transporters affecting the balance between Ca2+ sequestration and Ca2+ release pathways, notably those associated with internal Ca2+ stores and their turnover. Other, unexpected synergies appear, including with the plasma membrane anion channels and H+-ATPase and with the tonoplast TPK K+ channel. These emergent synergies, and the core hubs of interaction that they define, identify subsets of transporters associated with free cytosolic Ca2+ concentration that represent key targets to enhance plant performance in the future. They also highlight the importance of interactions between the voltage regulation of the plasma membrane and tonoplast in coordinating transport between the different cellular compartments.
© 2017 American Society of Plant Biologists. All Rights Reserved.

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Year:  2017        PMID: 28432256      PMCID: PMC5462055          DOI: 10.1104/pp.17.00170

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  29 in total

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3.  Phosphorylation of BLUS1 kinase by phototropins is a primary step in stomatal opening.

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Journal:  Nat Commun       Date:  2013       Impact factor: 14.919

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Authors:  G Thiel; E A MacRobbie; M R Blatt
Journal:  J Membr Biol       Date:  1992-02       Impact factor: 1.843

5.  The Plasma Membrane H+-ATPase AHA1 Plays a Major Role in Stomatal Opening in Response to Blue Light.

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Journal:  Plant Physiol       Date:  2016-06-03       Impact factor: 8.340

6.  Role of calcium in the modulation of Vicia guard cell potassium channels by abscisic acid: a patch-clamp study.

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Review 7.  The generation of Ca(2+) signals in plants.

Authors:  Alistair M Hetherington; Colin Brownlee
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Review 8.  The Membrane Transport System of the Guard Cell and Its Integration for Stomatal Dynamics.

Authors:  Mareike Jezek; Michael R Blatt
Journal:  Plant Physiol       Date:  2017-04-13       Impact factor: 8.340

9.  Systems dynamic modeling of a guard cell Cl- channel mutant uncovers an emergent homeostatic network regulating stomatal transpiration.

Authors:  Yizhou Wang; Maria Papanatsiou; Cornelia Eisenach; Rucha Karnik; Mary Williams; Adrian Hills; Virgilio L Lew; Michael R Blatt
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Review 10.  Exploring emergent properties in cellular homeostasis using OnGuard to model K+ and other ion transport in guard cells.

Authors:  Michael R Blatt; Yizhou Wang; Nathalie Leonhardt; Adrian Hills
Journal:  J Plant Physiol       Date:  2013-11-21       Impact factor: 3.549

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2.  Unusual Roles of Secretory SNARE SYP132 in Plasma Membrane H+-ATPase Traffic and Vegetative Plant Growth.

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4.  Deep dive into CO2-dependent molecular mechanisms driving stomatal responses in plants.

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5.  Unexpected Connections between Humidity and Ion Transport Discovered Using a Model to Bridge Guard Cell-to-Leaf Scales.

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Journal:  Plant Cell       Date:  2017-11-01       Impact factor: 11.277

6.  Small Pores with a Big Impact.

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Journal:  Plant Physiol       Date:  2017-06       Impact factor: 8.340

7.  Guard cell endomembrane Ca2+-ATPases underpin a 'carbon memory' of photosynthetic assimilation that impacts on water-use efficiency.

Authors:  Mareike Jezek; Fernanda A L Silva-Alvim; Adrian Hills; Yizhou Wang; Virgilio L Lew; Michael R Blatt; Naomi Donald; Maryam Rahmati Ishka; Jessica Shadbolt; Bingqing He; Tracy Lawson; Jeffrey F Harper
Journal:  Nat Plants       Date:  2021-07-29       Impact factor: 15.793

Review 8.  Predicting the unexpected in stomatal gas exchange: not just an open-and-shut case.

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10.  A constraint-relaxation-recovery mechanism for stomatal dynamics.

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