Literature DB >> 28432132

Do Memory CD4 T Cells Keep Their Cell-Type Programming: Plasticity versus Fate Commitment? Epigenome: A Dynamic Vehicle for Transmitting and Recording Cytokine Signaling.

John L Johnson1,2, Golnaz Vahedi1,2.   

Abstract

CD4+ T cells are critical for the elimination of an immense array of microbial pathogens. Although there are aspects of helper T-cell differentiation that can be modeled as a classic cell-fate commitment, CD4+ T cells also maintain considerable flexibility in their transcriptional program. Here, we present an overview of chromatin biology during cellular reprogramming and, within this context, envision how the scope of cellular reprogramming may be expanded to further our understanding of the controversy surrounding CD4+ T lymphocyte plasticity or determinism.
Copyright © 2018 Cold Spring Harbor Laboratory Press; all rights reserved.

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Year:  2018        PMID: 28432132      PMCID: PMC5830896          DOI: 10.1101/cshperspect.a028779

Source DB:  PubMed          Journal:  Cold Spring Harb Perspect Biol        ISSN: 1943-0264            Impact factor:   10.005


  34 in total

Review 1.  The technology and biology of single-cell RNA sequencing.

Authors:  Aleksandra A Kolodziejczyk; Jong Kyoung Kim; Valentine Svensson; John C Marioni; Sarah A Teichmann
Journal:  Mol Cell       Date:  2015-05-21       Impact factor: 17.970

2.  Latent enhancers activated by stimulation in differentiated cells.

Authors:  Renato Ostuni; Viviana Piccolo; Iros Barozzi; Sara Polletti; Alberto Termanini; Silvia Bonifacio; Alessia Curina; Elena Prosperini; Serena Ghisletti; Gioacchino Natoli
Journal:  Cell       Date:  2013-01-17       Impact factor: 41.582

3.  Clinical recovery from surgery correlates with single-cell immune signatures.

Authors:  Brice Gaudillière; Gabriela K Fragiadakis; Robert V Bruggner; Monica Nicolau; Rachel Finck; Martha Tingle; Julian Silva; Edward A Ganio; Christine G Yeh; William J Maloney; James I Huddleston; Stuart B Goodman; Mark M Davis; Sean C Bendall; Wendy J Fantl; Martin S Angst; Garry P Nolan
Journal:  Sci Transl Med       Date:  2014-09-24       Impact factor: 17.956

4.  Developmental Acquisition of Regulomes Underlies Innate Lymphoid Cell Functionality.

Authors:  Han-Yu Shih; Giuseppe Sciumè; Yohei Mikami; Liying Guo; Hong-Wei Sun; Stephen R Brooks; Joseph F Urban; Fred P Davis; Yuka Kanno; John J O'Shea
Journal:  Cell       Date:  2016-05-05       Impact factor: 41.582

Review 5.  Mechanisms underlying lineage commitment and plasticity of helper CD4+ T cells.

Authors:  John J O'Shea; William E Paul
Journal:  Science       Date:  2010-02-26       Impact factor: 47.728

Review 6.  Mapping human epigenomes.

Authors:  Chloe M Rivera; Bing Ren
Journal:  Cell       Date:  2013-09-26       Impact factor: 41.582

7.  Facilitators and impediments of the pluripotency reprogramming factors' initial engagement with the genome.

Authors:  Abdenour Soufi; Greg Donahue; Kenneth S Zaret
Journal:  Cell       Date:  2012-11-15       Impact factor: 41.582

8.  An IL-9 fate reporter demonstrates the induction of an innate IL-9 response in lung inflammation.

Authors:  Christoph Wilhelm; Keiji Hirota; Benjamin Stieglitz; Jacques Van Snick; Mauro Tolaini; Katharina Lahl; Tim Sparwasser; Helena Helmby; Brigitta Stockinger
Journal:  Nat Immunol       Date:  2011-10-09       Impact factor: 25.606

9.  Single-cell chromatin accessibility reveals principles of regulatory variation.

Authors:  Jason D Buenrostro; Beijing Wu; Ulrike M Litzenburger; Dave Ruff; Michael L Gonzales; Michael P Snyder; Howard Y Chang; William J Greenleaf
Journal:  Nature       Date:  2015-06-17       Impact factor: 49.962

10.  The transcription factor BATF operates as an essential differentiation checkpoint in early effector CD8+ T cells.

Authors:  Makoto Kurachi; R Anthony Barnitz; Nir Yosef; Pamela M Odorizzi; Michael A DiIorio; Madeleine E Lemieux; Kathleen Yates; Jernej Godec; Martin G Klatt; Aviv Regev; E John Wherry; W Nicholas Haining
Journal:  Nat Immunol       Date:  2014-03-02       Impact factor: 25.606

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  6 in total

Review 1.  Innate Lymphoid Cells: Diversity, Plasticity, and Unique Functions in Immunity.

Authors:  Marco Colonna
Journal:  Immunity       Date:  2018-06-19       Impact factor: 31.745

2.  Simian Immunodeficiency Virus Infects Functionally Polarized Memory CD4 T Cells Equivalently In Vivo.

Authors:  Stephen H Lai; Carly E Starke; Jacob K Flynn; Carol L Vinton; Alexandra M Ortiz; Joseph C Mudd; Jason M Brenchley
Journal:  J Virol       Date:  2019-04-17       Impact factor: 5.103

3.  T follicular helper cells in human efferent lymph retain lymphoid characteristics.

Authors:  Laura A Vella; Marcus Buggert; Sasikanth Manne; Ramin S Herati; Ismail Sayin; Leticia Kuri-Cervantes; Irene Bukh Brody; Kaitlin C O'Boyle; Hagop Kaprielian; Josephine R Giles; Son Nguyen; Alexander Muselman; Jack P Antel; Amit Bar-Or; Matthew E Johnson; David H Canaday; Ali Naji; Vitaly V Ganusov; Terri M Laufer; Andrew D Wells; Yoav Dori; Maxim G Itkin; Michael R Betts; E John Wherry
Journal:  J Clin Invest       Date:  2019-07-02       Impact factor: 14.808

4.  Subsets of ILC3-ILC1-like cells generate a diversity spectrum of innate lymphoid cells in human mucosal tissues.

Authors:  Marina Cella; Ramya Gamini; Cristiane Sécca; Patrick L Collins; Shanrong Zhao; Vincent Peng; Michelle L Robinette; Jorge Schettini; Konstantin Zaitsev; William Gordon; Jennifer K Bando; Kentaro Yomogida; Victor Cortez; Catrina Fronick; Robert Fulton; Lih-Ling Lin; Susan Gilfillan; Richard A Flavell; Liang Shan; Maxim N Artyomov; Michael Bowman; Eugene M Oltz; Scott A Jelinsky; Marco Colonna
Journal:  Nat Immunol       Date:  2019-06-17       Impact factor: 25.606

5.  Increased circulating innate lymphoid cell (ILC)1 and decreased circulating ILC3 are involved in the pathogenesis of Henoch-Schonlein purpura.

Authors:  Lili Zhang; Qiang Lin; Lijun Jiang; Mingfu Wu; Linlin Huang; Wei Quan; Xiaozhong Li
Journal:  BMC Pediatr       Date:  2022-04-12       Impact factor: 2.125

6.  Apolipoprotein AI prevents regulatory to follicular helper T cell switching during atherosclerosis.

Authors:  Dalia E Gaddis; Lindsey E Padgett; Runpei Wu; Chantel McSkimming; Veronica Romines; Angela M Taylor; Coleen A McNamara; Mitchell Kronenberg; Shane Crotty; Michael J Thomas; Mary G Sorci-Thomas; Catherine C Hedrick
Journal:  Nat Commun       Date:  2018-03-15       Impact factor: 14.919

  6 in total

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