Literature DB >> 28430181

Supervised learning and dimension reduction techniques for quantification of retinal fluid in optical coherence tomography images.

A Breger1, M Ehler1, H Bogunovic2, S M Waldstein2, A-M Philip2, U Schmidt-Erfurth2, B S Gerendas2.   

Abstract

PurposeThe purpose of the present study is to develop fast automated quantification of retinal fluid in optical coherence tomography (OCT) image sets.MethodsWe developed an image analysis pipeline tailored towards OCT images that consists of five steps for binary retinal fluid segmentation. The method is based on feature extraction, pre-segmention, dimension reduction procedures, and supervised learning tools.ResultsFluid identification using our pipeline was tested on two separate patient groups: one associated to neovascular age-related macular degeneration, the other showing diabetic macular edema. For training and evaluation purposes, retinal fluid was annotated manually in each cross-section by human expert graders of the Vienna Reading Center. Compared with the manual annotations, our pipeline yields good quantification, visually and in numbers.ConclusionsBy demonstrating good automated retinal fluid quantification, our pipeline appears useful to expert graders within their current grading processes. Owing to dimension reduction, the actual learning part is fast and requires only few training samples. Hence, it is well-suited for integration into actual manufacturer's devices, further improving segmentation by its use in daily clinical life.

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Year:  2017        PMID: 28430181      PMCID: PMC5584504          DOI: 10.1038/eye.2017.61

Source DB:  PubMed          Journal:  Eye (Lond)        ISSN: 0950-222X            Impact factor:   3.775


  17 in total

1.  Retinal vessel segmentation using the 2-D Gabor wavelet and supervised classification.

Authors:  João V B Soares; Jorge J G Leandro; Roberto M Cesar Júnior; Herbert F Jelinek; Michael J Cree
Journal:  IEEE Trans Med Imaging       Date:  2006-09       Impact factor: 10.048

2.  Random walks for image segmentation.

Authors:  Leo Grady
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2006-11       Impact factor: 6.226

3.  Shadow removal and contrast enhancement in optical coherence tomography images of the human optic nerve head.

Authors:  Michaël J A Girard; Nicholas G Strouthidis; C Ross Ethier; Jean Martial Mari
Journal:  Invest Ophthalmol Vis Sci       Date:  2011-09-29       Impact factor: 4.799

4.  Computerized assessment of intraretinal and subretinal fluid regions in spectral-domain optical coherence tomography images of the retina.

Authors:  Yalin Zheng; Jayashree Sahni; Claudio Campa; Alexandros N Stangos; Ankur Raj; Simon P Harding
Journal:  Am J Ophthalmol       Date:  2012-10-27       Impact factor: 5.258

5.  Computerized interpretation of ECGs: supplement not a substitute.

Authors:  N A Mark Estes
Journal:  Circ Arrhythm Electrophysiol       Date:  2013-02

Review 6.  A view of the current and future role of optical coherence tomography in the management of age-related macular degeneration.

Authors:  U Schmidt-Erfurth; S Klimscha; S M Waldstein; H Bogunović
Journal:  Eye (Lond)       Date:  2016-11-25       Impact factor: 3.775

7.  Three-dimensional segmentation of fluid-associated abnormalities in retinal OCT: probability constrained graph-search-graph-cut.

Authors:  Xinjian Chen; Meindert Niemeijer; Li Zhang; Kyungmoo Lee; Michael D Abramoff; Milan Sonka
Journal:  IEEE Trans Med Imaging       Date:  2012-03-19       Impact factor: 10.048

8.  Stratified Sampling Voxel Classification for Segmentation of Intraretinal and Subretinal Fluid in Longitudinal Clinical OCT Data.

Authors:  Milan Sonka; Michael D Abramoff
Journal:  IEEE Trans Med Imaging       Date:  2015-03-06       Impact factor: 10.048

9.  Modeling Photo-Bleaching Kinetics to Create High Resolution Maps of Rod Rhodopsin in the Human Retina.

Authors:  Martin Ehler; Julia Dobrosotskaya; Denise Cunningham; Wai T Wong; Emily Y Chew; Wojtek Czaja; Robert F Bonner
Journal:  PLoS One       Date:  2015-07-21       Impact factor: 3.240

10.  Automated segmentation of intraretinal cystoid fluid in optical coherence tomography.

Authors:  Gary R Wilkins; Odette M Houghton; Amy L Oldenburg
Journal:  IEEE Trans Biomed Eng       Date:  2012-01-16       Impact factor: 4.538

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  5 in total

1.  Higher-Order Assessment of OCT in Diabetic Macular Edema from the VISTA Study: Ellipsoid Zone Dynamics and the Retinal Fluid Index.

Authors:  Justis P Ehlers; Atsuro Uchida; Ming Hu; Natalia Figueiredo; Peter K Kaiser; Jeffrey S Heier; David M Brown; David S Boyer; Diana V Do; Andrea Gibson; Namrata Saroj; Sunil K Srivastava
Journal:  Ophthalmol Retina       Date:  2019-07-06

2.  Three-dimensional diabetic macular edema thickness maps based on fluid segmentation and fovea detection using deep learning.

Authors:  Jing-Jing Xu; Yang Zhou; Qi-Jie Wei; Kang Li; Zhen-Ping Li; Tian Yu; Jian-Chun Zhao; Da-Yong Ding; Xi-Rong Li; Guang-Zhi Wang; Hong Dai
Journal:  Int J Ophthalmol       Date:  2022-03-18       Impact factor: 1.779

3.  Longitudinal Higher-Order OCT Assessment of Quantitative Fluid Dynamics and the Total Retinal Fluid Index in Neovascular AMD.

Authors:  Justis P Ehlers; Julie Clark; Atsuro Uchida; Natalia Figueiredo; Amy Babiuch; Katherine E Talcott; Leina Lunasco; Thuy K Le; Xiangyi Meng; Ming Hu; Jamie Reese; Sunil K Srivastava
Journal:  Transl Vis Sci Technol       Date:  2021-03-01       Impact factor: 3.283

4.  A Novel Approach to Quantitative Evaluation of Outer Retinal Lesions Via a New Parameter "Integral" in Spectral Domain Optical Coherence Tomography.

Authors:  Junxiang Gu; Tingting Jiang; Mingrong Yu; Jian Yu; Wenting Li; Shixue Liu; Peijun Zhang; Wenwen Chen; Qing Chang
Journal:  Transl Vis Sci Technol       Date:  2020-11-02       Impact factor: 3.283

5.  Multi-Compartment Spatially-Derived Radiomics From Optical Coherence Tomography Predict Anti-VEGF Treatment Durability in Macular Edema Secondary to Retinal Vascular Disease: Preliminary Findings.

Authors:  Sudeshna Sil Kar; Duriye Damla Sevgi; Vincent Dong; Sunil K Srivastava; Anant Madabhushi; Justis P Ehlers
Journal:  IEEE J Transl Eng Health Med       Date:  2021-07-12
  5 in total

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