Literature DB >> 28426133

Quantitative phase microscopy spatial signatures of cancer cells.

Darina Roitshtain1, Lauren Wolbromsky1, Evgeny Bal1, Hayit Greenspan1, Lisa L Satterwhite2, Natan T Shaked1.   

Abstract

We present cytometric classification of live healthy and cancerous cells by using the spatial morphological and textural information found in the label-free quantitative phase images of the cells. We compare both healthy cells to primary tumor cells and primary tumor cells to metastatic cancer cells, where tumor biopsies and normal tissues were isolated from the same individuals. To mimic analysis of liquid biopsies by flow cytometry, the cells were imaged while unattached to the substrate. We used low-coherence off-axis interferometric phase microscopy setup, which allows a single-exposure acquisition mode, and thus is suitable for quantitative imaging of dynamic cells during flow. After acquisition, the optical path delay maps of the cells were extracted and then used to calculate 15 parameters derived from the cellular 3D morphology and texture. Upon analyzing tens of cells in each group, we found high statistical significance in the difference between the groups in most of the parameters calculated, with the same trends for all statistically significant parameters. Furthermore, a specially designed machine learning algorithm, implemented on the phase map extracted features, classified the correct cell type (healthy/cancer/metastatic) with 81-93% sensitivity and 81-99% specificity. The quantitative phase imaging approach for liquid biopsies presented in this paper could be the basis for advanced techniques of staging freshly isolated live cancer cells in imaging flow cytometers.
© 2017 International Society for Advancement of Cytometry. © 2017 International Society for Advancement of Cytometry.

Entities:  

Keywords:  cytometry; digital holographic microscopy; interferometric imaging; machine learning; quantitative phase microscopy

Mesh:

Year:  2017        PMID: 28426133     DOI: 10.1002/cyto.a.23100

Source DB:  PubMed          Journal:  Cytometry A        ISSN: 1552-4922            Impact factor:   4.355


  15 in total

1.  PhUn-Net: ready-to-use neural network for unwrapping quantitative phase images of biological cells.

Authors:  Gili Dardikman-Yoffe; Darina Roitshtain; Simcha K Mirsky; Nir A Turko; Mor Habaza; Natan T Shaked
Journal:  Biomed Opt Express       Date:  2020-01-24       Impact factor: 3.732

2.  Optophysiology of cardiomyocytes: characterizing cellular motion with quantitative phase imaging.

Authors:  Christine Cordeiro; Oscar J Abilez; Georges Goetz; Tushar Gupta; Yan Zhuge; Olav Solgaard; Daniel Palanker
Journal:  Biomed Opt Express       Date:  2017-09-22       Impact factor: 3.732

3.  Machine Learning with Optical Phase Signatures for Phenotypic Profiling of Cell Lines.

Authors:  Van K Lam; Thanh Nguyen; Thuc Phan; Byung-Min Chung; George Nehmetallah; Christopher B Raub
Journal:  Cytometry A       Date:  2019-04-22       Impact factor: 4.355

Review 4.  Emerging machine learning approaches to phenotyping cellular motility and morphodynamics.

Authors:  Hee June Choi; Chuangqi Wang; Xiang Pan; Junbong Jang; Mengzhi Cao; Joseph A Brazzo; Yongho Bae; Kwonmoo Lee
Journal:  Phys Biol       Date:  2021-06-17       Impact factor: 2.959

5.  High accuracy label-free classification of single-cell kinetic states from holographic cytometry of human melanoma cells.

Authors:  Miroslav Hejna; Aparna Jorapur; Jun S Song; Robert L Judson
Journal:  Sci Rep       Date:  2017-09-20       Impact factor: 4.379

6.  PhaseStain: the digital staining of label-free quantitative phase microscopy images using deep learning.

Authors:  Yair Rivenson; Tairan Liu; Zhensong Wei; Yibo Zhang; Kevin de Haan; Aydogan Ozcan
Journal:  Light Sci Appl       Date:  2019-02-06       Impact factor: 17.782

7.  Label-free classification of cells based on supervised machine learning of subcellular structures.

Authors:  Yusuke Ozaki; Hidenao Yamada; Hirotoshi Kikuchi; Amane Hirotsu; Tomohiro Murakami; Tomohiro Matsumoto; Toshiki Kawabata; Yoshihiro Hiramatsu; Kinji Kamiya; Toyohiko Yamauchi; Kentaro Goto; Yukio Ueda; Shigetoshi Okazaki; Masatoshi Kitagawa; Hiroya Takeuchi; Hiroyuki Konno
Journal:  PLoS One       Date:  2019-01-29       Impact factor: 3.240

8.  Quantitative scoring of epithelial and mesenchymal qualities of cancer cells using machine learning and quantitative phase imaging.

Authors:  Van Lam; Thanh Nguyen; Vy Bui; Byung Min Chung; Lin-Ching Chang; George Nehmetallah; Christopher Raub
Journal:  J Biomed Opt       Date:  2020-02       Impact factor: 3.170

9.  Morphology, Motility, and Cytoskeletal Architecture of Breast Cancer Cells Depend on Keratin 19 and Substrate.

Authors:  Van K Lam; Pooja Sharma; Thanh Nguyen; Georges Nehmetallah; Christopher B Raub; Byung Min Chung
Journal:  Cytometry A       Date:  2020-04-14       Impact factor: 4.355

Review 10.  Combining Three-Dimensional Quantitative Phase Imaging and Fluorescence Microscopy for the Study of Cell Pathophysiology.

Authors:  Young Seo Kim; SangYun Lee; JaeHwang Jung; Seungwoo Shin; He-Gwon Choi; Guang-Ho Cha; Weisun Park; Sumin Lee; YongKeun Park
Journal:  Yale J Biol Med       Date:  2018-09-21
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