Literature DB >> 28424096

Metabolic and proteomic analyses of product selectivity and redox regulation in Clostridium pasteurianum grown on glycerol under varied iron availability.

Christin Groeger1, Wei Wang1, Wael Sabra1, Tyll Utesch1, An-Ping Zeng2.   

Abstract

BACKGROUND: Clostridium pasteurianum as an emerging new microbial cell factory can produce both n-butanol (BuOH) and 1,3-propanediol (1,3-PDO), and the pattern of product formation changes significantly with the composition of the culture medium. Among others iron content in the medium was shown to strongly affect the products selectivity. However, the mechanism behind this metabolic regulation is still unclear. For a better understanding of such metabolic regulation and for process optimization, we carried out fermentation experiments under either iron excess or iron limitation conditions, and performed metabolic, stoichiometric and proteomic analyses.
RESULTS: 1,3-PDO is most effectively produced under iron limited condition (Fe-), whereas 1,3-PDO and BuOH were both produced under iron rich condition (Fe+). With increased iron availability the BuOH/1,3-PDO ratio increased significantly from 0.27 mol/mol (at Fe-) to 1.4 mol/mol (at Fe+). Additionally, hydrogen production was enhanced significantly under Fe+ condition. Proteomic analysis revealed differentiated expression of many proteins including several ones of the central carbon metabolic pathway. Among others, pyruvate: ferredoxin oxidoreductase, hydrogenases, and several electron transfer flavoproteins was found to be strongly up-regulated under Fe+ condition, pointing to their strong involvement in the regeneration of the oxidized form of ferredoxin, and consequently their influences on the product selectivity in C. pasteurianum. Of particular significance is the finding that H2 formation in C. pasteurianum is coupled to the ferredoxin-dependent butyryl-CoA dehydrogenase catalyzed reaction, which significantly affects the redox balance and thus the product selectivity.
CONCLUSIONS: The metabolic, stoichiometric and proteomic results clearly show the key roles of hydrogenases and ferredoxins dependent reactions in determining the internal redox balance and hence product selectivity. Not only the NADH pool but also the regulation of the ferredoxin pool could explain such product variation under different iron conditions.

Entities:  

Keywords:  1,3-Propanediol; C. pasteurianum; Metabolic analysis; Product selectivity; Proteomics; n-Butanol

Mesh:

Substances:

Year:  2017        PMID: 28424096      PMCID: PMC5395762          DOI: 10.1186/s12934-017-0678-9

Source DB:  PubMed          Journal:  Microb Cell Fact        ISSN: 1475-2859            Impact factor:   5.328


  31 in total

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Review 2.  Energy conservation via electron bifurcating ferredoxin reduction and proton/Na(+) translocating ferredoxin oxidation.

Authors:  Wolfgang Buckel; Rudolf K Thauer
Journal:  Biochim Biophys Acta       Date:  2012-07-16

3.  Metabolic engineering of cyanobacteria for 1-butanol production from carbon dioxide.

Authors:  Ethan I Lan; James C Liao
Journal:  Metab Eng       Date:  2011-05-04       Impact factor: 9.783

4.  Characterization and mechanism of action of a reactivating factor for adenosylcobalamin-dependent glycerol dehydratase.

Authors:  H Kajiura; K Mori; T Tobimatsu; T Toraya
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5.  Molecular mechanism of pyruvate-ferredoxin oxidoreductases based on data obtained with the Clostridium pasteurianum enzyme.

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Journal:  FEBS Lett       Date:  1996-02-19       Impact factor: 4.124

6.  Dual substrate strategy to enhance butanol production using high cell inoculum and its efficient recovery by pervaporation.

Authors:  Sweta Yadav; Garima Rawat; Priyanka Tripathi; R K Saxena
Journal:  Bioresour Technol       Date:  2013-11-19       Impact factor: 9.642

7.  Impact of butyric acid on butanol formation by Clostridium pasteurianum.

Authors:  Lars Regestein; Eric Will Doerr; Antje Staaden; Lars Rehmann
Journal:  Bioresour Technol       Date:  2015-07-28       Impact factor: 9.642

8.  A reactivating factor for coenzyme B12-dependent diol dehydratase.

Authors:  T Toraya; K Mori
Journal:  J Biol Chem       Date:  1999-02-05       Impact factor: 5.157

9.  Electricity-driven metabolic shift through direct electron uptake by electroactive heterotroph Clostridium pasteurianum.

Authors:  Okkyoung Choi; Taeyeon Kim; Han Min Woo; Youngsoon Um
Journal:  Sci Rep       Date:  2014-11-07       Impact factor: 4.379

10.  Production of 1,3-PDO and butanol by a mutant strain of Clostridium pasteurianum with increased tolerance towards crude glycerol.

Authors:  Torbjørn Olshøj Jensen; Thomas Kvist; Marie Just Mikkelsen; Peter Westermann
Journal:  AMB Express       Date:  2012-08-17       Impact factor: 3.298

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  4 in total

1.  Mechanisms underlying Clostridium pasteurianum's metabolic shift when grown with Geobacter sulfurreducens.

Authors:  Roland Berthomieu; María Fernanda Pérez-Bernal; Gaëlle Santa-Catalina; Elie Desmond-Le Quéméner; Nicolas Bernet; Eric Trably
Journal:  Appl Microbiol Biotechnol       Date:  2021-12-23       Impact factor: 4.813

2.  Metabolomic and kinetic investigations on the electricity-aided production of butanol by Clostridium pasteurianum strains.

Authors:  Philipp Arbter; Wael Sabra; Tyll Utesch; Yaeseong Hong; An-Ping Zeng
Journal:  Eng Life Sci       Date:  2020-12-06       Impact factor: 2.678

Review 3.  Bioconversion of Lignocellulosic Biomass into Value Added Products under Anaerobic Conditions: Insight into Proteomic Studies.

Authors:  Martha Inés Vélez-Mercado; Alicia Guadalupe Talavera-Caro; Karla María Escobedo-Uribe; Salvador Sánchez-Muñoz; Miriam Paulina Luévanos-Escareño; Fernando Hernández-Terán; Alejandra Alvarado; Nagamani Balagurusamy
Journal:  Int J Mol Sci       Date:  2021-11-12       Impact factor: 5.923

4.  Phenotype analysis of cultivation processes via unsupervised machine learning: Demonstration for Clostridium pasteurianum.

Authors:  Yaeseong Hong; Tom Nguyen; Philipp Arbter; Tyll Utesch; An-Ping Zeng
Journal:  Eng Life Sci       Date:  2021-12-10       Impact factor: 2.678

  4 in total

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