Literature DB >> 28416712

Comment on "A Database of Human Immune Receptor Alleles Recovered from Population Sequencing Data".

Corey T Watson1, Frederick A Matsen2, Katherine J L Jackson3, Ali Bashir4,5, Melissa Laird Smith4,5, Jacob Glanville6,7, Felix Breden8, Steven H Kleinstein9,10, Andrew M Collins11, Christian E Busse12.   

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Year:  2017        PMID: 28416712     DOI: 10.4049/jimmunol.1700306

Source DB:  PubMed          Journal:  J Immunol        ISSN: 0022-1767            Impact factor:   5.422


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  19 in total

1.  Susceptibility to Hypertensive Renal Disease in the Spontaneously Hypertensive Rat Is Influenced by 2 Loci Affecting Blood Pressure and Immunoglobulin Repertoire.

Authors:  Isha S Dhande; Stacy M Cranford; Yaming Zhu; Sterling C Kneedler; M John Hicks; Scott E Wenderfer; Michael C Braun; Peter A Doris
Journal:  Hypertension       Date:  2018-02-05       Impact factor: 10.190

2.  Germ-line genetic variation in the immunoglobulin heavy chain creates stroke susceptibility in the spontaneously hypertensive rat.

Authors:  Isha S Dhande; Sterling C Kneedler; Aniket S Joshi; Yaming Zhu; M John Hicks; Scott E Wenderfer; Michael C Braun; Peter A Doris
Journal:  Physiol Genomics       Date:  2019-10-14       Impact factor: 3.107

3.  A BALB/c IGHV Reference Set, Defined by Haplotype Analysis of Long-Read VDJ-C Sequences From F1 (BALB/c x C57BL/6) Mice.

Authors:  Katherine J L Jackson; Justin T Kos; William Lees; William S Gibson; Melissa Laird Smith; Ayelet Peres; Gur Yaari; Martin Corcoran; Christian E Busse; Mats Ohlin; Corey T Watson; Andrew M Collins
Journal:  Front Immunol       Date:  2022-06-03       Impact factor: 8.786

4.  Trace Reconstruction Problems in Computational Biology.

Authors:  Vinnu Bhardwaj; Pavel A Pevzner; Cyrus Rashtchian; Yana Safonova
Journal:  IEEE Trans Inf Theory       Date:  2020-10-13       Impact factor: 2.978

Review 5.  Computational Strategies for Dissecting the High-Dimensional Complexity of Adaptive Immune Repertoires.

Authors:  Enkelejda Miho; Alexander Yermanos; Cédric R Weber; Christoph T Berger; Sai T Reddy; Victor Greiff
Journal:  Front Immunol       Date:  2018-02-21       Impact factor: 7.561

6.  De novo Inference of Diversity Genes and Analysis of Non-canonical V(DD)J Recombination in Immunoglobulins.

Authors:  Yana Safonova; Pavel A Pevzner
Journal:  Front Immunol       Date:  2019-05-03       Impact factor: 7.561

7.  Per-sample immunoglobulin germline inference from B cell receptor deep sequencing data.

Authors:  Duncan K Ralph; Frederick A Matsen
Journal:  PLoS Comput Biol       Date:  2019-07-22       Impact factor: 4.475

8.  Genotyping and Copy Number Analysis of Immunoglobin Heavy Chain Variable Genes Using Long Reads.

Authors:  Michael Ford; Ehsan Haghshenas; Corey T Watson; S Cenk Sahinalp
Journal:  iScience       Date:  2020-02-04

9.  OGRDB: a reference database of inferred immune receptor genes.

Authors:  William Lees; Christian E Busse; Martin Corcoran; Mats Ohlin; Cathrine Scheepers; Frederick A Matsen; Gur Yaari; Corey T Watson; Andrew Collins; Adrian J Shepherd
Journal:  Nucleic Acids Res       Date:  2020-01-08       Impact factor: 16.971

10.  Automated analysis of immunosequencing datasets reveals novel immunoglobulin D genes across diverse species.

Authors:  Vinnu Bhardwaj; Massimo Franceschetti; Ramesh Rao; Pavel A Pevzner; Yana Safonova
Journal:  PLoS Comput Biol       Date:  2020-04-27       Impact factor: 4.475

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