Literature DB >> 28413105

Investigation of OMNIgene·SPUTUM performance in delayed tuberculosis testing by smear, culture, and Xpert MTB/RIF assays in Uganda.

C D Kelly-Cirino1, E Musisi2, P Byanyima3, S Kaswabuli4, A Andama5, A Sessolo6, I Sanyu7, J Zawedde8, P S Curry9, L Huang10.   

Abstract

OMNIgene·SPUTUM (OM-S) is a sample transport reagent designed to work with all tuberculosis diagnostics while eliminating the need for cold chain. OM-S-treated sputum samples were assayed in several tests after multiday holds. Raw sputa from 100 patients underwent direct smear microscopy, were manually split and assigned to the OM-S group [OM-S added at collection (no other processing required) and tested after 0- to 5-day holds at room temperature] or standard-of-care (SOC) group (NaOH/N-acetyl l-cysteine decontamination, all tested on day of collection). Concentrated smear microscopy, Lowenstein Jensen (LJ) culture, and mycobacteria growth indicator tube (MGIT) culture were performed. For patients with negative direct smear, a second sample was split, with SOC (raw sputum) and OM-S portions (sediment) tested in the Xpert MTB/RIF (Xpert) assay. OM-S group and SOC group results were strongly concordant on all four tests [range, 89% (MGIT)-97% (Xpert)]. OM-S MGIT, LJ, and Xpert tests were in statistical agreement with SOC MGIT as reference. OM-S specimens had lower culture contamination rates (3% vs. 10% LJ; 2% vs. 5% MGIT) but required, on average, 5.6 additional days to become MGIT-positive. The findings suggest that samples held/transported in OM-S are compatible with smear microscopy, LJ or MGIT culture, and Xpert, and perform comparably to fresh sputum samples. Larger feasibility studies are warranted.
Copyright © 2017. Published by Elsevier Ltd.

Entities:  

Keywords:  MGIT; Molecular detection; Mycobacterium tuberculosis; Preservation; Solid culture; Specimen transport medium

Mesh:

Year:  2017        PMID: 28413105     DOI: 10.1016/j.jegh.2017.04.001

Source DB:  PubMed          Journal:  J Epidemiol Glob Health        ISSN: 2210-6006


  7 in total

1.  Evaluation of OMNIgene Sputum and Ethanol Reagent for Preservation of Sputum Prior to Xpert and Culture Testing in Uganda.

Authors:  Elisa Ardizzoni; Patrick Orikiriza; Charles Ssuuna; Dan Nyehangane; Mourad Gumsboga; Ivan Mugisha Taremwa; Esther Turyashemererwa; Juliet Mwanga-Amumpaire; Céline Langendorf; Maryline Bonnet
Journal:  J Clin Microbiol       Date:  2019-12-23       Impact factor: 5.948

2.  Guidance for Studies Evaluating the Accuracy of Sputum-Based Tests to Diagnose Tuberculosis.

Authors:  Samuel G Schumacher; William A Wells; Mark P Nicol; Karen R Steingart; Grant Theron; Susan E Dorman; Madhukar Pai; Gavin Churchyard; Lesley Scott; Wendy Stevens; Pamela Nabeta; David Alland; Karin Weyer; Claudia M Denkinger; Christopher Gilpin
Journal:  J Infect Dis       Date:  2019-10-08       Impact factor: 5.226

3.  Xpert MTB/RIF and Xpert MTB/RIF Ultra for pulmonary tuberculosis and rifampicin resistance in adults.

Authors:  David J Horne; Mikashmi Kohli; Jerry S Zifodya; Ian Schiller; Nandini Dendukuri; Deanna Tollefson; Samuel G Schumacher; Eleanor A Ochodo; Madhukar Pai; Karen R Steingart
Journal:  Cochrane Database Syst Rev       Date:  2019-06-07

4.  Development and evaluation of novel bio-safe filter paper-based kits for sputum microscopy and transport to directly detect Mycobacterium tuberculosis and associated drug resistance.

Authors:  Divya Anthwal; Surabhi Lavania; Rakesh Kumar Gupta; Ajoy Verma; Vithal Prasad Myneedu; Prem Prakash Sharma; Hitesh Verma; Viveksheel Malhotra; Ashawant Gupta; Nalini Kant Gupta; Rohit Sarin; Sagarika Haldar; Jaya Sivaswami Tyagi
Journal:  PLoS One       Date:  2019-08-13       Impact factor: 3.240

5.  [Vancomycin-based Lowenstein-Jensen selective medium for reducing contamination of mycobacterial cultures by spore-forming bacteria].

Authors:  Michel Kiréopori Gomgnimbou; Babacar Faye; Juliette Tranchot-Diallo; Antoinette Kaboré; Louis Robert Belem; Dezémon Zingué; Adama Sanou; Hervé Hien; Lassana Sangaré
Journal:  Pan Afr Med J       Date:  2020-12-15

6.  High Mycobacterium tuberculosis Bacillary Loads Detected by Tuberculosis Molecular Bacterial Load Assay in Patient Stool: a Potential Alternative for Nonsputum Diagnosis and Treatment Response Monitoring of Tuberculosis.

Authors:  Emmanuel Musisi; Abdul Sessolo; Sylvia Kaswabuli; Josephine Zawedde; Patrick Byanyima; Shariifah Kasinga; Ingvar Sanyu; Esther Uwimaana; Stanley Walimbwa; Joseph Olore; Willy Ssengooba; Christine Sekaggya; Moses L Joloba; William Worodria; Laurence Huang; Stephen H Gillespie; Derek J Sloan; Wilber Sabiiti
Journal:  Microbiol Spectr       Date:  2022-01-12

7.  OMNIgene.SPUTUM suppresses contaminants while maintaining Mycobacterium tuberculosis viability and obviates cold-chain transport.

Authors:  Khalide Azam; Nureisha Cadir; Carla Madeira; Stephen H Gillespie; Wilber Sabiiti
Journal:  ERJ Open Res       Date:  2018-02-16
  7 in total

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