Literature DB >> 28411224

Concurrent Haloalkanoate Degradation and Chlorate Reduction by Pseudomonas chloritidismutans AW-1T.

Peng Peng1, Ying Zheng1, Jasper J Koehorst2, Peter J Schaap2, Alfons J M Stams1,3, Hauke Smidt1, Siavash Atashgahi4.   

Abstract

Haloalkanoates are environmental pollutants that can be degraded aerobically by microorganisms producing hydrolytic dehalogenases. However, there is a lack of information about the anaerobic degradation of haloalkanoates. Genome analysis of Pseudomonas chloritidismutans AW-1T, a facultative anaerobic chlorate-reducing bacterium, showed the presence of two putative haloacid dehalogenase genes, the l-DEX gene and dehI, encoding an l-2-haloacid dehalogenase (l-DEX) and a halocarboxylic acid dehydrogenase (DehI), respectively. Hence, we studied the concurrent degradation of haloalkanoates and chlorate as a yet-unexplored trait of strain AW-1T The deduced amino acid sequences of l-DEX and DehI revealed 33 to 37% and 26 to 86% identities with biochemically/structurally characterized l-DEX and the d- and dl-2-haloacid dehalogenase enzymes, respectively. Physiological experiments confirmed that strain AW-1T can grow on chloroacetate, bromoacetate, and both l- and d-α-halogenated propionates with chlorate as an electron acceptor. Interestingly, growth and haloalkanoate degradation were generally faster with chlorate as an electron acceptor than with oxygen as an electron acceptor. In line with this, analyses of l-DEX and DehI dehalogenase activities using cell-free extract (CFE) of strain AW-1T grown on dl-2-chloropropionate under chlorate-reducing conditions showed up to 3.5-fold higher dehalogenase activity than the CFE obtained from AW-1T cells grown on dl-2-chloropropionate under aerobic conditions. Reverse transcription-quantitative PCR showed that the l-DEX gene was expressed constitutively independently of the electron donor (haloalkanoates or acetate) or acceptor (chlorate or oxygen), whereas the expression of dehI was induced by haloalkanoates. Concurrent degradation of organic and inorganic halogenated compounds by strain AW-1T represents a unique metabolic capacity in a single bacterium, providing a new piece of the puzzle of the microbial halogen cycle.IMPORTANCE Halogenated organic and inorganic compounds are important environmental pollutants that have carcinogenic and genotoxic effects on both animals and humans. Previous research studied the degradation of organic and inorganic halogenated compounds separately but not concurrently. This study shows concurrent degradation of halogenated alkanoates and chlorate as an electron donor and acceptor, respectively, coupled to growth in a single bacterium, Pseudomonas chloritidismutans AW-1T Hence, besides biogenesis of molecular oxygen from chlorate reduction enabling a distinctive placement of strain AW-1T between aerobic and anaerobic microorganisms, we can now add another unique metabolic potential of this bacterium to the roster. The degradation of different halogenated compounds under anoxic conditions by a single bacterium is also of interest for the natural halogen cycle in different aquatic and terrestrial ecosystems where ample natural production of halogenated compounds has been documented.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Pseudomonas chloritidismutans; chlorate; d-2-haloacid dehalogenase; haloalkanoates; l-2-haloacid dehalogenase

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Year:  2017        PMID: 28411224      PMCID: PMC5452809          DOI: 10.1128/AEM.00325-17

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  41 in total

1.  A new mathematical model for relative quantification in real-time RT-PCR.

Authors:  M W Pfaffl
Journal:  Nucleic Acids Res       Date:  2001-05-01       Impact factor: 16.971

2.  Genome and proteome analysis of Pseudomonas chloritidismutans AW-1T that grows on n-decane with chlorate or oxygen as electron acceptor.

Authors:  Farrakh Mehboob; Margreet J Oosterkamp; Jasper J Koehorst; Sumaira Farrakh; Teun Veuskens; Caroline M Plugge; Sjef Boeren; Willem M de Vos; Gosse Schraa; Alfons J M Stams; Peter J Schaap
Journal:  Environ Microbiol       Date:  2015-06-05       Impact factor: 5.491

Review 3.  (Per)chlorate in Biology on Earth and Beyond.

Authors:  Matthew D Youngblut; Ouwei Wang; Tyler P Barnum; John D Coates
Journal:  Annu Rev Microbiol       Date:  2016-07-25       Impact factor: 15.500

4.  Evaluation of normalization reference genes for RT-qPCR analysis of spo0A and four sporulation sigma factor genes in Clostridium botulinum Group I strain ATCC 3502.

Authors:  David G Kirk; Eveliina Palonen; Hannu Korkeala; Miia Lindström
Journal:  Anaerobe       Date:  2014-01-02       Impact factor: 3.331

5.  Transposition of DEH, a broad-host-range transposon flanked by ISPpu12, in Pseudomonas putida is associated with genomic rearrangements and dehalogenase gene silencing.

Authors:  Andrew J Weightman; Andrew W Topping; Katja E Hill; Li Ling Lee; Kenji Sakai; J Howard Slater; Andrew W Thomas
Journal:  J Bacteriol       Date:  2002-12       Impact factor: 3.490

6.  DL-2-Haloacid dehalogenase from Pseudomonas sp. 113 is a new class of dehalogenase catalyzing hydrolytic dehalogenation not involving enzyme-substrate ester intermediate.

Authors:  V Nardi-Dei; T Kurihara; C Park; M Miyagi; S Tsunasawa; K Soda; N Esaki
Journal:  J Biol Chem       Date:  1999-07-23       Impact factor: 5.157

7.  Identification of glucose-fermenting bacteria present in an in vitro model of the human intestine by RNA-stable isotope probing.

Authors:  Markus Egert; Albert A de Graaf; Annet Maathuis; Pieter de Waard; Caroline M Plugge; Hauke Smidt; Nicolaas E P Deutz; Cor Dijkema; Willem M de Vos; Koen Venema
Journal:  FEMS Microbiol Ecol       Date:  2007-02-22       Impact factor: 4.194

8.  Growth of Pseudomonas chloritidismutans AW-1(T) on n-alkanes with chlorate as electron acceptor.

Authors:  Farrakh Mehboob; Howard Junca; Gosse Schraa; Alfons J M Stams
Journal:  Appl Microbiol Biotechnol       Date:  2009-04-08       Impact factor: 4.813

9.  A highly purified enrichment culture couples the reductive dechlorination of tetrachloroethene to growth.

Authors:  C Holliger; G Schraa; A J Stams; A J Zehnder
Journal:  Appl Environ Microbiol       Date:  1993-09       Impact factor: 4.792

10.  Purification and characterization of a chlorite dismutase from Pseudomonas chloritidismutans.

Authors:  Farrakh Mehboob; Arthur F M Wolterink; Arjan J Vermeulen; Bo Jiang; Peter-Leon Hagedoorn; Alfons J M Stams; Servé W M Kengen
Journal:  FEMS Microbiol Lett       Date:  2008-02-17       Impact factor: 2.742

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  4 in total

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Journal:  Appl Environ Microbiol       Date:  2022-03-14       Impact factor: 5.005

2.  Two TonB-Dependent Transporters in Methylosinus trichosporium OB3b Are Responsible for Uptake of Different Forms of Methanobactin and Are Involved in the Canonical "Copper Switch".

Authors:  Peng Peng; Christina S Kang-Yun; Jin Chang; Wenyu Gu; Alan A DiSpirito; Jeremy D Semrau
Journal:  Appl Environ Microbiol       Date:  2021-10-20       Impact factor: 5.005

Review 3.  Microbial Synthesis and Transformation of Inorganic and Organic Chlorine Compounds.

Authors:  Siavash Atashgahi; Martin G Liebensteiner; Dick B Janssen; Hauke Smidt; Alfons J M Stams; Detmer Sipkema
Journal:  Front Microbiol       Date:  2018-12-12       Impact factor: 5.640

4.  A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways.

Authors:  Siavash Atashgahi; Bastian Hornung; Marcelle J van der Waals; Ulisses Nunes da Rocha; Floor Hugenholtz; Bart Nijsse; Douwe Molenaar; Rob van Spanning; Alfons J M Stams; Jan Gerritse; Hauke Smidt
Journal:  Sci Rep       Date:  2018-03-14       Impact factor: 4.379

  4 in total

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