Literature DB >> 28409196

Evolutionary Analysis of the Mammalian Tuftelin Sequence Reveals Features of Functional Importance.

S Delgado1, D Deutsch2, J Y Sire3.   

Abstract

Tuftelin (TUFT1) is an acidic, phosphorylated glycoprotein, initially discovered in developing enamel matrix. TUFT1 is expressed in many mineralized and non-mineralized tissues. We performed an evolutionary analysis of 82 mammalian TUFT1 sequences to identify residues and motifs that were conserved during 220 million years (Ma) of evolution. We showed that 168 residues (out of the 390 residues composing the human TUFT1 sequence) are under purifying selection. Our analyses identified several, new, putatively functional domains and confirmed previously described functional domains, such as the TIP39 interaction domain, which correlates with nuclear localization of the TUFT1 protein, that was demonstrated in several tissues. We also identified several sites under positive selection, which could indicate evolutionary changes possibly related to the functional diversification of TUFT1 during evolution in some lineages. We discovered that TUFT1 and MYZAP (myocardial zonula adherens protein) share a common ancestor that was duplicated circa 500 million years ago. Taken together, these findings expand our knowledge of TUFT1 evolution and provide new information that will be useful for further investigation of TUFT1 functions.

Entities:  

Keywords:  Evolution; MYZAP; Mammals; Mineralization; TUFT1; Tuftelin

Mesh:

Substances:

Year:  2017        PMID: 28409196     DOI: 10.1007/s00239-017-9789-5

Source DB:  PubMed          Journal:  J Mol Evol        ISSN: 0022-2844            Impact factor:   2.395


  36 in total

1.  Codon-substitution models for heterogeneous selection pressure at amino acid sites.

Authors:  Z Yang; R Nielsen; N Goldman; A M Pedersen
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

2.  The induction of tuftelin expression in PC12 cell line during hypoxia and NGF-induced differentiation.

Authors:  Yoav Leiser; Nechama Silverstein; Anat Blumenfeld; Dekel Shilo; Amir Haze; Eli Rosenfeld; Boaz Shay; Rinat Tabakman; Shimon Lecht; Philip Lazarovici; Dan Deutsch
Journal:  J Cell Physiol       Date:  2011-01       Impact factor: 6.384

3.  Sequencing of bovine enamelin ("tuftelin") a novel acidic enamel protein.

Authors:  D Deutsch; A Palmon; L W Fisher; N Kolodny; J D Termine; M F Young
Journal:  J Biol Chem       Date:  1991-08-25       Impact factor: 5.157

4.  Using CLUSTAL for multiple sequence alignments.

Authors:  D G Higgins; J D Thompson; T J Gibson
Journal:  Methods Enzymol       Date:  1996       Impact factor: 1.600

5.  Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification.

Authors:  Robert W Meredith; Jan E Janečka; John Gatesy; Oliver A Ryder; Colleen A Fisher; Emma C Teeling; Alisha Goodbla; Eduardo Eizirik; Taiz L L Simão; Tanja Stadler; Daniel L Rabosky; Rodney L Honeycutt; John J Flynn; Colleen M Ingram; Cynthia Steiner; Tiffani L Williams; Terence J Robinson; Angela Burk-Herrick; Michael Westerman; Nadia A Ayoub; Mark S Springer; William J Murphy
Journal:  Science       Date:  2011-09-22       Impact factor: 47.728

6.  Altered enamelin phosphorylation site causes amelogenesis imperfecta.

Authors:  H-C Chan; L Mai; A Oikonomopoulou; H L Chan; A S Richardson; S-K Wang; J P Simmer; J C-C Hu
Journal:  J Dent Res       Date:  2010-05-03       Impact factor: 6.116

7.  Structural organization and cellular localization of tuftelin-interacting protein 11 (TFIP11).

Authors:  X Wen; Y-P Lei; Y L Zhou; C T Okamoto; M L Snead; M L Paine
Journal:  Cell Mol Life Sci       Date:  2005-05       Impact factor: 9.261

8.  Genes expressed in dental enamel development are associated with molar-incisor hypomineralization.

Authors:  Fabiano Jeremias; Mine Koruyucu; Erika C Küchler; Merve Bayram; Elif B Tuna; Kathleen Deeley; Ricardo A Pierri; Juliana F Souza; Camila M B Fragelli; Marco A B Paschoal; Koray Gencay; Figen Seymen; Raquel M S Caminaga; Lourdes dos Santos-Pinto; Alexandre R Vieira
Journal:  Arch Oral Biol       Date:  2013-06-19       Impact factor: 2.633

9.  Localization, quantification, and characterization of tuftelin in soft tissues.

Authors:  Yoav Leiser; Anat Blumenfeld; Amir Haze; Leah Dafni; Angela L Taylor; Eli Rosenfeld; Eran Fermon; Yael Gruenbaum-Cohen; Boaz Shay; Dan Deutsch
Journal:  Anat Rec (Hoboken)       Date:  2007-05       Impact factor: 2.064

10.  Selecton 2007: advanced models for detecting positive and purifying selection using a Bayesian inference approach.

Authors:  Adi Stern; Adi Doron-Faigenboim; Elana Erez; Eric Martz; Eran Bacharach; Tal Pupko
Journal:  Nucleic Acids Res       Date:  2007-06-22       Impact factor: 16.971

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  5 in total

1.  Exploring the rearrangement of sensory intelligence in proteobacteria: insight of Pho regulon.

Authors:  Varsha Jha; Hitesh Tikariha; Nishant A Dafale; Hemant J Purohit
Journal:  World J Microbiol Biotechnol       Date:  2018-11-09       Impact factor: 3.312

2.  Tuftelin Is Required for NGF-Induced Differentiation of PC12 Cells.

Authors:  Dekel Shilo; Gadi Cohen; Anat Blumenfeld; Koby Goren; Salem Hanhan; Shay Sharon; Amir Haze; Dan Deutsch; Philip Lazarovici
Journal:  J Mol Neurosci       Date:  2019-03-21       Impact factor: 3.444

3.  Tuftelin and HIFs expression in osteogenesis.

Authors:  Jan Bobek; Veronika Oralova; Adela Kratochvilova; Ivana Zvackova; Herve Lesot; Eva Matalova
Journal:  Histochem Cell Biol       Date:  2019-09-13       Impact factor: 4.304

4.  Oncogenic tuftelin 1 as a potential molecular-targeted for inhibiting hepatocellular carcinoma growth.

Authors:  Meng-Na Wu; Wen-Jie Zheng; Wen-Xin Ye; Li Wang; Ying Chen; Jie Yang; Deng-Fu Yao; Min Yao
Journal:  World J Gastroenterol       Date:  2021-06-21       Impact factor: 5.742

5.  Tuftelin 1 (TUFT1) Promotes the Proliferation and Migration of Renal Cell Carcinoma via PI3K/AKT Signaling Pathway.

Authors:  Hua Lin; Weifeng Zeng; Yuhang Lei; Desheng Chen; Zhen Nie
Journal:  Pathol Oncol Res       Date:  2021-04-19       Impact factor: 3.201

  5 in total

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