| Literature DB >> 28399856 |
B J Chen1, X Y Xie1, L J Ni1, X L Dai1, Y Lu2, X Q Wu1, H Y Li1, Y D Yao3, S Y Huang4.
Abstract
BACKGROUND: The nasal cavity is the main colonization site of Staphylococcus aureus (S. aureus) in human body. Nasal carriage may be a strong risk factor for some serious infection. There was still limited information about the nasal carriage for S. aureus in south China.Entities:
Keywords: Antimicrobial susceptibility; Medical population; Molecular characteristics; Nasal carriage; Staphylococcus aureus
Mesh:
Substances:
Year: 2017 PMID: 28399856 PMCID: PMC5387264 DOI: 10.1186/s12941-017-0206-0
Source DB: PubMed Journal: Ann Clin Microbiol Antimicrob ISSN: 1476-0711 Impact factor: 3.944
Fig. 1Detection of SCCmec types and virulence factor genes. a Multiplex PCR assay identifies SCCmec types and subtypes I, II, III, IVa, and V. Simultaneously the mecA gene was detected. The following DNA templates were used for PCR (by lane): M, marker; 1–5, Control strains (SCCmec type I–V); 6, S. aureus strains isolated from the volunteers in the study. b PCR assay identifies sea gene. The following DNA templates were used for PCR (by lane): M, marker; 9, positive control; 10–16, S. aureus strains isolated from the volunteers in the study. c Electrophoresis image of Pulsed field gel electrophoresis. The following DNA templates were used for electrophoresis (by lane): M, The positive control strain Salmonella ser. Braenderup standard strain H9812; 1–11, S. aureus strains isolated from the volunteers in the study. d PCR assay identifies seb gene. The following DNA templates were used for PCR (by lane): M, marker; 1, positive control; 2–8, S. aureus strains isolated from the volunteers in the study
Fig. 3A neighbour-joining tree reveals phylogenetic relationships of 23 S. aureus strains isolated from the volunteers in the study. The neighbor joining tree was based on the concatenated sequences of each of the 23 sequence types noted in the combined dataset, as determined using the S. aureus MLST database (http://saureus.mlst.net/) and implemented in MEGA v6.06 using Kimura-2-parameter distances. The relationships shown were based on 1000 re-samplings for bootstrapping. Each clonal complex (CC) is composed of STs that cluster with a ≥70% bootstrap confidence value. Bsides, Bayesian phylogram indicating the evolutionary relationships of S. aureus strains analyzed in this study. PFGE, pulsed-field gel electrophoresis; SCH, the volunteers who work or study in the college; SOC, the volunteers who work beside the college
Univariate and multivariate analysis of risk factors associated with S. aureus nasal carriage among 295 volunteers at the campus of Zhongshan School of Medicine, Sun Yat-sen University, Guangzhou
| Characteristic | The healthy people (n = 295), n (%) | |||||
|---|---|---|---|---|---|---|
| Carriers (n = 73) | Non-carriers (n = 222) | Univariate | Multivariate logistic | |||
|
| OR (95% CI) |
| OR (95% CI) | |||
| Sex | ||||||
| Male | 44 (32.6) | 91 (67.4) | 0.005 | 2.04 (1.27–3.79) | 0.021 | 2.51 (1.29–3.91) |
| Female | 29 (18.1) | 131 (81.9) | ||||
| Age, years | ||||||
| ≤20 | 41 (33.1) | 8 (66.9) | <0.001 | 0.25 (0.11–0.54) | 0.01 | 3.30 (1.12–9.75) |
| >20–30 | 18 (26.5) | 50 (73.5) | 0.021 | 0.31 (0.11–0.84) | 0.041 | 2.71 (1.15–7.51) |
| ≥30–50 | 8 (17.0) | 39 (83.0) | 0.312 | 0.56 (0.18–1.74) | 0.451 | 1.91 (0.44–4.91) |
| ≥50 | 6 (10.7) | 50 (89.3) | 1 | 1 | ||
| Antibiotic use in past 1 month | ||||||
| Yes | 4 (20.0) | 16 (80.0) | 0.612 | 0.75 (0.24–2.31) | ||
| No | 69 (25.1) | 206 (74.9) | ||||
| Regular contact nasal cavity cleaning | ||||||
| Yes | 13 (13.0) | 87 (87.0) | 0.001 | 0.34 (0.17–0.65) | <0.001 | 0.29 (0.15–0.56) |
| No | 59 (30.4) | 135 (69.6) | ||||
| Hospitalization in past one year | ||||||
| Yes | 4 (36.4) | 7 (63.6) | 0.369 | 1.78 (0.51–6.27) | ||
| No | 69 (24.3) | 215 (75.7) | ||||
| Underlying disease | ||||||
| Yes | 11 (36.7) | 19 (63.3) | 0.891 | 1.05 (0.50–2.21) | ||
| No | 62 (23.4) | 203 (76.6) | ||||
| Household member working in Medical Institutions | ||||||
| Yes | 14 (26.4) | 39 (73.6) | 0.689 | 1.15 (0.58–2.27) | ||
| No | 59 (24.4) | 183 (75.6) | ||||
Underlying disease: hypertension, diabetes, chronic rhinitis, urticaria, hyperthyroidism
OR odds ratio, CI confidence interval
Fig. 2Antibiotic susceptibility profiles of 73 S. aureus isolates
Demographic characteristics and molecular features of 23 cases with S. aureus carried
| Case | Age | Gender | Profession | Resistance profile |
|
| ST | CC | PFGE |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 20 | Female | SCH | PEN, GEN, ERY, TCY, CLI, SXT | − | +/+ | 59 | 59 | G |
| 2 | 23 | Male | SCH | PEN | − | ± | 6 | 6 | A |
| 3 | 22 | Male | SCH | PEN, ERY, TCY, CLI | − | ± | 59 | 59 | G |
| 4 | 21 | Male | SCH | NR. | − | −/+ | 188 | 188 | A |
| 5 | 20 | Female | SCH | PEN, CTX | − | +/+ | 965 | 5 | A |
| 6 | 62 | Female | SCH | PEN, ERY | − | +/+ | 30 | 30 | C |
| 7 | 23 | Female | SOC | PEN | − | +/+ | 72 | 72 | B |
| 8 | 70 | Female | SOC | PEN, CIP, CLI | − | +/+ | 1 | 1 | A |
| 9 | 17 | Female | SOC | PEN, FOX, CXM, CTX, CRO, IPM, CIP,GEN, ERY, TCY, CLI | − | −/+ | 8 | 8 | C |
| 10 | 65 | Female | SOC | PEN | − | −/+ | 188 | 188 | A |
| 11 | 62 | Female | SOC | PEN | − | −/− | 188 | 188 | A |
| 12 | 53 | Male | SCH | PEN, CLI | − | +/+ | 1 | 1 | A |
| 13 | 24 | Female | SCH | PEN, CLI | − | ± | 1 | 1 | A |
| 14 | 13 | Female | SCH | GEN, ERY, CLI, SXT | − | +/+ | 5 | 5 | A |
| 15 | 14 | Male | SCH | ERY | − | ± | 6 | 6 | A |
| 16 | 14 | Male | SCH | PEN, GEN, ERY | − | ± | 30 | 30 | C |
| 17 | 14 | Female | SCH | PEN, ERY, TCY, CLI | − | ± | 59 | 59 | H |
| 18 | 14 | Male | SCH | PEN, GEN, ERY, TCY | − | +/+ | 965 | 5 | A |
| 19 | 13 | Female | SCH | PEN, GEN, ERY, CLI, SXT | − | +/+ | 7 | 7 | K |
| 20 | 14 | Male | SCH | NR. | − | +/+ | 59 | 59 | G |
| 21 | 13 | Female | SCH | ERY | − | +/+ | 944 | 182 | E |
| 22 | 14 | Male | SCH | NR. | − | +/+ | 7 | 7 | A |
| 23 | 14 | Male | SCH | NR. | − | +/+ | 537 | 59 | G |
SCH the volunteers who work or study in the college, SOC the volunteers who work beside the college, pvl Panton-Valentine leukocidin gene, sea staphylococcal enterotoxin A gene, seb staphylococcal enterotoxin B gene, ST sequence type, CC clonal complexe, PFGE pulsed-field gelelectrophoresis, PEN penicillin, FOX cefoxitin, CXM cefuroxime, CTX cefotaxime, CRO ceftriaxone, IPM imipenem, TCY tetracycline, CIP ciprofloxacin, CLI clindamycin, ERY erythromycin, GEN gentamicin, SXT trimethoprim/sulfamethoxazole, NR. the isolate is sensitive to all the antibiotics, negative, + positive