Literature DB >> 28391083

Epigenome-wide association studies for cancer biomarker discovery in circulating cell-free DNA: technical advances and challenges.

Miljana Tanić1, Stephan Beck2.   

Abstract

Since introducing the concept of epigenome-wide association studies (EWAS) in 2011, there has been a vast increase in the number of published EWAS studies in common diseases, including in cancer. These studies have increased our understanding of epigenetic events underlying carcinogenesis and have enabled the discovery of cancer-specific methylation biomarkers. In this mini-review, we have focused on the state of the art in EWAS applied to cell-free circulating DNA for epigenetic biomarker discovery in cancer and discussed associated technical advances and challenges, and our expectations for the future of the field.
Copyright © 2017 The Author(s). Published by Elsevier Ltd.. All rights reserved.

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Year:  2017        PMID: 28391083     DOI: 10.1016/j.gde.2017.01.017

Source DB:  PubMed          Journal:  Curr Opin Genet Dev        ISSN: 0959-437X            Impact factor:   5.578


  7 in total

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Authors:  Eveline M Ibeagha-Awemu; Ying Yu
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Review 2.  Capturing the 'ome': the expanding molecular toolbox for RNA and DNA library construction.

Authors:  Morgane Boone; Andries De Koker; Nico Callewaert
Journal:  Nucleic Acids Res       Date:  2018-04-06       Impact factor: 16.971

3.  Assessing ZNF154 methylation in patient plasma as a multicancer marker in liquid biopsies from colon, liver, ovarian and pancreatic cancer patients.

Authors:  Brendan F Miller; Hanna M Petrykowska; Laura Elnitski
Journal:  Sci Rep       Date:  2021-01-08       Impact factor: 4.996

Review 4.  Computational challenges in detection of cancer using cell-free DNA methylation.

Authors:  Madhu Sharma; Rohit Kumar Verma; Sunil Kumar; Vibhor Kumar
Journal:  Comput Struct Biotechnol J       Date:  2021-12-07       Impact factor: 7.271

5.  A DNA methylation-based liquid biopsy for triple-negative breast cancer.

Authors:  Katrina Cristall; Francois-Clement Bidard; Jean-Yves Pierga; Michael J Rauh; Tatiana Popova; Clara Sebbag; Olivier Lantz; Marc-Henri Stern; Christopher R Mueller
Journal:  NPJ Precis Oncol       Date:  2021-06-16

Review 6.  Profiling DNA Methylation Based on Next-Generation Sequencing Approaches: New Insights and Clinical Applications.

Authors:  Daniela Barros-Silva; C Joana Marques; Rui Henrique; Carmen Jerónimo
Journal:  Genes (Basel)       Date:  2018-08-23       Impact factor: 4.096

Review 7.  Ten Years of EWAS.

Authors:  Siyu Wei; Junxian Tao; Jing Xu; Xingyu Chen; Zhaoyang Wang; Nan Zhang; Lijiao Zuo; Zhe Jia; Haiyan Chen; Hongmei Sun; Yubo Yan; Mingming Zhang; Hongchao Lv; Fanwu Kong; Lian Duan; Ye Ma; Mingzhi Liao; Liangde Xu; Rennan Feng; Guiyou Liu; The Ewas Project; Yongshuai Jiang
Journal:  Adv Sci (Weinh)       Date:  2021-08-11       Impact factor: 16.806

  7 in total

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