Literature DB >> 28388485

Metabolic systems modeling for cell factories improvement.

Po-Wei Chen1, Matthew K Theisen1, James C Liao2.   

Abstract

Techniques for modeling microbial bioproduction systems have evolved over many decades. Here, we survey recent literature and focus on modeling approaches for improving bioproduction. These techniques from systems biology are based on different methodologies, starting from stoichiometry only to various stoichiometry with kinetics approaches that address different issues in metabolic systems. Techniques to overcome unknown kinetic parameters using random sampling have emerged to address meaningful questions. Among those questions, pathway robustness seems to be an important issue for metabolic engineering. We also discuss the increasing significance of databases in biology and their potential impact for biotechnology.
Copyright © 2017 Elsevier Ltd. All rights reserved.

Mesh:

Year:  2017        PMID: 28388485     DOI: 10.1016/j.copbio.2017.02.005

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  4 in total

Review 1.  Production of C2-C4 diols from renewable bioresources: new metabolic pathways and metabolic engineering strategies.

Authors:  Ye Zhang; Dehua Liu; Zhen Chen
Journal:  Biotechnol Biofuels       Date:  2017-12-13       Impact factor: 6.040

2.  2-Phenylethanol and 2-phenylethylacetate production by nonconventional yeasts using tequila vinasses as a substrate.

Authors:  José de Jesús Rodríguez-Romero; César Arturo Aceves-Lara; Cristina Ferreira Silva; Anne Gschaedler; Lorena Amaya-Delgado; Javier Arrizon
Journal:  Biotechnol Rep (Amst)       Date:  2020-01-24

3.  13C metabolic flux analysis-guided metabolic engineering of Escherichia coli for improved acetol production from glycerol.

Authors:  Ruilian Yao; Jiawei Li; Lei Feng; Xuehong Zhang; Hongbo Hu
Journal:  Biotechnol Biofuels       Date:  2019-02-13       Impact factor: 6.040

4.  Comparison of Optimization-Modelling Methods for Metabolites Production in Escherichia coli.

Authors:  Mee K Lee; Mohd Saberi Mohamad; Yee Wen Choon; Kauthar Mohd Daud; Nurul Athirah Nasarudin; Mohd Arfian Ismail; Zuwairie Ibrahim; Suhaimi Napis; Richard O Sinnott
Journal:  J Integr Bioinform       Date:  2020-05-06
  4 in total

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