Literature DB >> 28388467

RHD and RHCE genotyping by next-generation sequencing is an effective strategy to identify molecular variants within sickle cell disease patients.

Marcia R Dezan1, Ingrid Helena Ribeiro1, Valéria B Oliveira1, Juliana B Vieira1, Francisco C Gomes1, Lucas A M Franco2, Leonardo Varuzza2, Roberto Ribeiro2, Karen Ziza Chinoca3, José Eduardo Levi1, José Eduardo Krieger3, Alexandre Costa Pereira4, Sandra F M Gualandro3, Vanderson G Rocha5, Alfredo Mendrone-Junior1, Ester Cerdeira Sabino2, Carla Luana Dinardo6.   

Abstract

BACKGROUND: The complexity of Rh genetic variation among sickle cell disease (SCD) patients is high. Conventional molecular assays cannot identify all genetic variants already described for the RH locus as well as foresee novel alleles. Sequencing RHD and RHCE is indicated to broaden the search for Rh genetic variants. AIMS: To standardize the Next Generation Sequencing (NGS) strategy to assertively identify Rh genetic variants among SCD patients with serologic suspicion of Rh variants and evaluate if it can improve the transfusion support.
METHODS: Thirty-five SCD patients with unexplained Rh antibodies were enrolled. A NGS-based strategy was developed to genotype RHD and RHCE using gene-specific primers. Genotype and serological data were compared.
RESULTS: Data obtained from the NGS-based assay were gene-specific. Ten and 25 variant RHD and RHCE alleles were identified, respectively. Among all cases of unexplained Rh antibodies, 62% had been inaccurately classified by serological analysis and, of these, 73.1% were considered as relevant, as were associated with increased risk of hemolytic reactions and shortage of units suitable for transfusion.
CONCLUSION: The NGS assay designed to genotype RH coding regions was effective and accurate in identifying variants. The proposed strategy clarified the Rh phenotype of most patients, improving transfusion support.
Copyright © 2017 Elsevier Inc. All rights reserved.

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Year:  2017        PMID: 28388467     DOI: 10.1016/j.bcmd.2017.03.014

Source DB:  PubMed          Journal:  Blood Cells Mol Dis        ISSN: 1079-9796            Impact factor:   3.039


  13 in total

1.  Optimized Antigen Matching - Chances and Challenges in Molecular Times.

Authors:  Christoph Gassner; Franz F Wagner
Journal:  Transfus Med Hemother       Date:  2018-07-24       Impact factor: 3.747

2.  High frequency of variant RHD genotypes among donors and patients of mixed origin with serologic weak-D phenotype.

Authors:  Marcia Regina Dezan; Valéria B Oliveira; Çarolina Nunes Gomes; Fabio Luz; Antônio J Gallucci; Silvia L Bonifácio; Cecília Salete Alencar; Ester C Sabino; Alexandre C Pereira; Jose E Krieger; Vanderson Rocha; Alfredo Mendrone-Junior; Carla L Dinardo
Journal:  J Clin Lab Anal       Date:  2018-06-26       Impact factor: 2.352

3.  RHD and RHCE molecular analysis in weak D blood donors and in patients with Rh antibodies against their own corresponding Rh antigen.

Authors:  Thamy C Souza Silva; Bruno R Cruz; Sidneia S Costa; Akemi K Chiba; Melca M O Barros; Dante M Langhi; José O Bordin
Journal:  Blood Transfus       Date:  2020-07       Impact factor: 3.443

4.  Diversity of RH and transfusion support in Brazilian sickle cell disease patients with unexplained Rh antibodies.

Authors:  Carla L Dinardo; Shannon Kelly; Marcia R Dezan; Ingrid H Ribeiro; Shirley L Castilho; Luciana C Schimidt; Maria do C Valgueiro; Liliana R Preiss; Brian Custer; Ester C Sabino; Connie M Westhoff
Journal:  Transfusion       Date:  2019-08-13       Impact factor: 3.157

Review 5.  Optimized Antigen-Matched in Sickle Cell Disease Patients: Chances and Challenges in Molecular Times - the Brazilian Way.

Authors:  Lilian Castilho; Carla Luana Dinardo
Journal:  Transfus Med Hemother       Date:  2018-07-06       Impact factor: 3.747

6.  A novel algorithm comprehensively characterizes human RH genes using whole-genome sequencing data.

Authors:  Ti-Cheng Chang; Kelly M Haupfear; Jing Yu; Evadnie Rampersaud; Vivien A Sheehan; Jonathan M Flanagan; Jane S Hankins; Mitchell J Weiss; Gang Wu; Sunitha Vege; Connie M Westhoff; Stella T Chou; Yan Zheng
Journal:  Blood Adv       Date:  2020-09-22

7.  Next-generation sequencing of 35 RHD variants in 16 253 serologically D- pregnant women in the Finnish population.

Authors:  Silja M Tammi; Wajnat A Tounsi; Susanna Sainio; Michele Kiernan; Neil D Avent; Tracey E Madgett; Katri Haimila
Journal:  Blood Adv       Date:  2020-10-27

Review 8.  Next-Generation Sequencing Technologies in Blood Group Typing.

Authors:  Daniel Fürst; Chrysanthi Tsamadou; Christine Neuchel; Hubert Schrezenmeier; Joannis Mytilineos; Christof Weinstock
Journal:  Transfus Med Hemother       Date:  2019-12-11       Impact factor: 3.747

9.  Complete RHD next-generation sequencing: establishment of reference RHD alleles.

Authors:  Wajnat A Tounsi; Tracey E Madgett; Neil D Avent
Journal:  Blood Adv       Date:  2018-10-23

10.  Defining Blood Group Gene Reference Alleles by Long-Read Sequencing: Proof of Concept in the ACKR1 Gene Encoding the Duffy Antigens.

Authors:  Yann Fichou; Isabelle Berlivet; Gaëlle Richard; Christophe Tournamille; Lilian Castilho; Claude Férec
Journal:  Transfus Med Hemother       Date:  2019-12-11       Impact factor: 3.747

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