Literature DB >> 28388415

Multidimensional Tracking of GPCR Signaling via Peroxidase-Catalyzed Proximity Labeling.

Jaeho Paek1, Marian Kalocsay2, Dean P Staus3, Laura Wingler3, Roberta Pascolutti1, Joao A Paulo2, Steven P Gygi2, Andrew C Kruse4.   

Abstract

G-protein-coupled receptors (GPCRs) play critical roles in regulating physiological processes ranging from neurotransmission to cardiovascular function. Current methods for tracking GPCR signaling suffer from low throughput, modification or overexpression of effector proteins, and low temporal resolution. Here, we show that peroxidase-catalyzed proximity labeling can be combined with isobaric tagging and mass spectrometry to enable quantitative, time-resolved measurement of GPCR agonist response in living cells. Using this technique, termed "GPCR-APEX," we track activation and internalization of the angiotensin II type 1 receptor and the β2 adrenoceptor. These receptors co-localize with a variety of G proteins even before receptor activation, and activated receptors are largely sequestered from G proteins upon internalization. Additionally, the two receptors show differing internalization kinetics, and we identify the membrane protein LMBRD2 as a potential regulator of β2 adrenoceptor signaling, underscoring the value of a dynamic view of receptor function.
Copyright © 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  APEX; G-protein-coupled receptor; GPCR; isobaric tagging; mass spectrometry; proximity labeling; signal transduction

Mesh:

Substances:

Year:  2017        PMID: 28388415      PMCID: PMC5514552          DOI: 10.1016/j.cell.2017.03.028

Source DB:  PubMed          Journal:  Cell        ISSN: 0092-8674            Impact factor:   41.582


  30 in total

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3.  A kinase-regulated PDZ-domain interaction controls endocytic sorting of the beta2-adrenergic receptor.

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Journal:  Nature       Date:  1999-09-16       Impact factor: 49.962

4.  Structure-based discovery of opioid analgesics with reduced side effects.

Authors:  Aashish Manglik; Henry Lin; Dipendra K Aryal; John D McCorvy; Daniela Dengler; Gregory Corder; Anat Levit; Ralf C Kling; Viachaslau Bernat; Harald Hübner; Xi-Ping Huang; Maria F Sassano; Patrick M Giguère; Stefan Löber; Grégory Scherrer; Brian K Kobilka; Peter Gmeiner; Bryan L Roth; Brian K Shoichet
Journal:  Nature       Date:  2016-08-17       Impact factor: 49.962

5.  Structure of the Angiotensin receptor revealed by serial femtosecond crystallography.

Authors:  Haitao Zhang; Hamiyet Unal; Cornelius Gati; Gye Won Han; Wei Liu; Nadia A Zatsepin; Daniel James; Dingjie Wang; Garrett Nelson; Uwe Weierstall; Michael R Sawaya; Qingping Xu; Marc Messerschmidt; Garth J Williams; Sébastien Boutet; Oleksandr M Yefanov; Thomas A White; Chong Wang; Andrii Ishchenko; Kalyan C Tirupula; Russell Desnoyer; Jesse Coe; Chelsie E Conrad; Petra Fromme; Raymond C Stevens; Vsevolod Katritch; Sadashiva S Karnik; Vadim Cherezov
Journal:  Cell       Date:  2015-04-23       Impact factor: 41.582

6.  Conformational biosensors reveal GPCR signalling from endosomes.

Authors:  Roshanak Irannejad; Jin C Tomshine; Jon R Tomshine; Michael Chevalier; Jacob P Mahoney; Jan Steyaert; Søren G F Rasmussen; Roger K Sunahara; Hana El-Samad; Bo Huang; Mark von Zastrow
Journal:  Nature       Date:  2013-03-20       Impact factor: 49.962

7.  GPCR-G Protein-β-Arrestin Super-Complex Mediates Sustained G Protein Signaling.

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Journal:  Cell       Date:  2016-08-04       Impact factor: 41.582

8.  Crystal structure of the β2 adrenergic receptor-Gs protein complex.

Authors:  Søren G F Rasmussen; Brian T DeVree; Yaozhong Zou; Andrew C Kruse; Ka Young Chung; Tong Sun Kobilka; Foon Sun Thian; Pil Seok Chae; Els Pardon; Diane Calinski; Jesper M Mathiesen; Syed T A Shah; Joseph A Lyons; Martin Caffrey; Samuel H Gellman; Jan Steyaert; Georgios Skiniotis; William I Weis; Roger K Sunahara; Brian K Kobilka
Journal:  Nature       Date:  2011-07-19       Impact factor: 49.962

9.  MS3 eliminates ratio distortion in isobaric multiplexed quantitative proteomics.

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  69 in total

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Authors:  Braden T Lobingier; Mark von Zastrow
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Review 2.  How Ligands Illuminate GPCR Molecular Pharmacology.

Authors:  Daniel Wacker; Raymond C Stevens; Bryan L Roth
Journal:  Cell       Date:  2017-07-27       Impact factor: 41.582

3.  Opioid-Induced Hyperalgesia Is Associated with Dysregulation of Circadian Rhythm and Adaptive Immune Pathways in the Mouse Trigeminal Ganglia and Nucleus Accumbens.

Authors:  Pan Zhang; Laura S Moye; Bruce R Southey; Isaac Dripps; Jonathan V Sweedler; Amynah Pradhan; Sandra L Rodriguez-Zas
Journal:  Mol Neurobiol       Date:  2019-05-25       Impact factor: 5.590

4.  RNA-protein interaction mapping via MS2- or Cas13-based APEX targeting.

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Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-24       Impact factor: 11.205

Review 5.  Proximity labeling: spatially resolved proteomic mapping for neurobiology.

Authors:  Shuo Han; Jiefu Li; Alice Y Ting
Journal:  Curr Opin Neurobiol       Date:  2017-11-08       Impact factor: 6.627

6.  Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking.

Authors:  Pornchai Kaewsapsak; David Michael Shechner; William Mallard; John L Rinn; Alice Y Ting
Journal:  Elife       Date:  2017-12-14       Impact factor: 8.140

7.  Directed Evolution of Split APEX2 Peroxidase.

Authors:  Yisu Han; Tess Caroline Branon; Jeffrey D Martell; Daniela Boassa; David Shechner; Mark H Ellisman; Alice Ting
Journal:  ACS Chem Biol       Date:  2019-03-08       Impact factor: 5.100

Review 8.  A cellular perspective of bias at G protein-coupled receptors.

Authors:  Thomas J Fernandez; Monica De Maria; Braden T Lobingier
Journal:  Protein Sci       Date:  2020-04-27       Impact factor: 6.725

Review 9.  Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches.

Authors:  Payman Samavarchi-Tehrani; Reuben Samson; Anne-Claude Gingras
Journal:  Mol Cell Proteomics       Date:  2020-03-03       Impact factor: 5.911

Review 10.  Monitoring protein communities and their responses to therapeutics.

Authors:  Hanna G Budayeva; Donald S Kirkpatrick
Journal:  Nat Rev Drug Discov       Date:  2020-03-05       Impact factor: 84.694

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