Literature DB >> 28387774

Bacterial carbon use plasticity, phylogenetic diversity and the priming of soil organic matter.

Ember M Morrissey1,2, Rebecca L Mau1, Egbert Schwartz1,3, Theresa A McHugh1,4, Paul Dijkstra1,3, Benjamin J Koch1, Jane C Marks1,3, Bruce A Hungate1,3.   

Abstract

Microorganisms perform most decomposition on Earth, mediating carbon (C) loss from ecosystems, and thereby influencing climate. Yet, how variation in the identity and composition of microbial communities influences ecosystem C balance is far from clear. Using quantitative stable isotope probing of DNA, we show how individual bacterial taxa influence soil C cycling following the addition of labile C (glucose). Specifically, we show that increased decomposition of soil C in response to added glucose (positive priming) occurs as a phylogenetically diverse group of taxa, accounting for a large proportion of the bacterial community, shift toward additional soil C use for growth. Our findings suggest that many microbial taxa exhibit C use plasticity, as most taxa altered their use of glucose and soil organic matter depending upon environmental conditions. In contrast, bacteria that exhibit other responses to glucose (reduced growth or reliance on glucose for additional growth) clustered strongly by phylogeny. These results suggest that positive priming is likely the prototypical response of bacteria to sustained labile C addition, consistent with the widespread occurrence of the positive priming effect in nature.

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Year:  2017        PMID: 28387774      PMCID: PMC5520031          DOI: 10.1038/ismej.2017.43

Source DB:  PubMed          Journal:  ISME J        ISSN: 1751-7362            Impact factor:   10.302


  36 in total

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3.  Selective progressive response of soil microbial community to wild oat roots.

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4.  Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree.

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Journal:  Environ Microbiol       Date:  2009-07-23       Impact factor: 5.491

5.  Characterization of growing microorganisms in soil by stable isotope probing with H218O.

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Journal:  Appl Environ Microbiol       Date:  2007-02-23       Impact factor: 4.792

6.  Bacterial adaptation through distributed sensing of metabolic fluxes.

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7.  Soil C and N availability determine the priming effect: microbial N mining and stoichiometric decomposition theories.

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Authors:  Ember M Morrissey; Rebecca L Mau; Egbert Schwartz; J Gregory Caporaso; Paul Dijkstra; Natasja van Gestel; Benjamin J Koch; Cindy M Liu; Michaela Hayer; Theresa A McHugh; Jane C Marks; Lance B Price; Bruce A Hungate
Journal:  ISME J       Date:  2016-03-04       Impact factor: 10.302

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2.  Vertical Distribution of Soil Bacterial Communities in Different Forest Types Along an Elevation Gradient.

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Journal:  ISME J       Date:  2021-03-29       Impact factor: 11.217

4.  Glucose addition promotes C fixation and bacteria diversity in C-poor soils, improves root morphology, and enhances key N metabolism in apple roots.

Authors:  Bianbin Qi; Kuo Zhang; Sijun Qin; Deguo Lyu; Jiali He
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5.  Linking Uncultivated Microbial Populations and Benthic Carbon Turnover by Using Quantitative Stable Isotope Probing.

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6.  Quantifying population-specific growth in benthic bacterial communities under low oxygen using H218O.

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Journal:  ISME J       Date:  2019-02-19       Impact factor: 10.302

7.  Soil minerals affect taxon-specific bacterial growth.

Authors:  Brianna K Finley; Rebecca L Mau; Michaela Hayer; Bram W Stone; Ember M Morrissey; Benjamin J Koch; Craig Rasmussen; Paul Dijkstra; Egbert Schwartz; Bruce A Hungate
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8.  Global ecological predictors of the soil priming effect.

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Journal:  Nat Commun       Date:  2019-08-02       Impact factor: 14.919

9.  Nutrients cause consolidation of soil carbon flux to small proportion of bacterial community.

Authors:  Bram W Stone; Junhui Li; Benjamin J Koch; Steven J Blazewicz; Paul Dijkstra; Michaela Hayer; Kirsten S Hofmockel; Xiao-Jun Allen Liu; Rebecca L Mau; Ember M Morrissey; Jennifer Pett-Ridge; Egbert Schwartz; Bruce A Hungate
Journal:  Nat Commun       Date:  2021-06-07       Impact factor: 14.919

10.  Interactions between microbial diversity and substrate chemistry determine the fate of carbon in soil.

Authors:  Nanette C Raczka; Juan Piñeiro; Malak M Tfaily; Rosalie K Chu; Mary S Lipton; Ljiljana Pasa-Tolic; Ember Morrissey; Edward Brzostek
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