Literature DB >> 28381579

Reverse Transcription Mechanically Initiates HIV-1 Capsid Disassembly.

Sanela Rankovic1, Janani Varadarajan2, Ruben Ramalho1, Christopher Aiken2, Itay Rousso3.   

Abstract

The HIV-1 core consists of the viral genomic RNA and several viral proteins encased within a conical capsid. After cell entry, the core disassembles in a process termed uncoating. Although HIV-1 uncoating has been linked to reverse transcription of the viral genome in target cells, the mechanism by which uncoating is initiated is unknown. Using time-lapse atomic force microscopy, we analyzed the morphology and physical properties of isolated HIV-1 cores during the course of reverse transcription in vitro We found that, during an early stage of reverse transcription the pressure inside the capsid increases, reaching a maximum after 7 h. High-resolution mechanical mapping reveals the formation of a stiff coiled filamentous structure underneath the capsid surface. Subsequently, this coiled structure disappears, the stiffness of the capsid drops precipitously to a value below that of a pre-reverse transcription core, and the capsid undergoes partial or complete rupture near the narrow end of the conical structure. We propose that the transcription of the relatively flexible single-stranded RNA into a more rigid filamentous structure elevates the pressure within the core, which triggers the initiation of capsid disassembly.IMPORTANCE For successful infection, the HIV-1 genome, which is in the form of a single-stranded RNA enclosed inside a capsid shell, must be reverse transcribed into double-stranded DNA and released from the capsid (in a process known as uncoating) before it can be integrated into the target cell genome. The mechanism that triggers uncoating is a pivotal question of long standing. By using atomic force microscopy, we found that during reverse transcription the pressure inside the capsid increases until the internal stress exceeds the strength of the capsid structure and the capsid breaks open. The application of AFM technologies to study purified HIV-1 cores represents a new experimental platform for elucidating additional aspects of capsid disassembly and HIV-1 uncoating.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  HIV-1; atomic force microscopy; capsid; reverse transcription; uncoating

Mesh:

Substances:

Year:  2017        PMID: 28381579      PMCID: PMC5446659          DOI: 10.1128/JVI.00289-17

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  31 in total

1.  Human immunodeficiency virus type 1 N-terminal capsid mutants that exhibit aberrant core morphology and are blocked in initiation of reverse transcription in infected cells.

Authors:  S Tang; T Murakami; B E Agresta; S Campbell; E O Freed; J G Levin
Journal:  J Virol       Date:  2001-10       Impact factor: 5.103

2.  Direct measurement of phage phi29 stiffness provides evidence of internal pressure.

Authors:  Mercedes Hernando-Pérez; Roberto Miranda; María Aznar; José L Carrascosa; Iwan A T Schaap; David Reguera; Pedro J de Pablo
Journal:  Small       Date:  2012-05-31       Impact factor: 13.281

3.  Mechanical properties of murine leukemia virus particles: effect of maturation.

Authors:  Nitzan Kol; Micha Gladnikoff; David Barlam; Roni Z Shneck; Alan Rein; Itay Rousso
Journal:  Biophys J       Date:  2006-04-21       Impact factor: 4.033

4.  HIV-1 DNA Flap formation promotes uncoating of the pre-integration complex at the nuclear pore.

Authors:  Nathalie J Arhel; Sylvie Souquere-Besse; Sandie Munier; Philippe Souque; Stéphanie Guadagnini; Sandra Rutherford; Marie-Christine Prévost; Terry D Allen; Pierre Charneau
Journal:  EMBO J       Date:  2007-06-07       Impact factor: 11.598

5.  Inhibition of reverse transcriptase activity increases stability of the HIV-1 core.

Authors:  Yang Yang; Thomas Fricke; Felipe Diaz-Griffero
Journal:  J Virol       Date:  2012-10-17       Impact factor: 5.103

6.  Formation of a human immunodeficiency virus type 1 core of optimal stability is crucial for viral replication.

Authors:  Brett M Forshey; Uta von Schwedler; Wesley I Sundquist; Christopher Aiken
Journal:  J Virol       Date:  2002-06       Impact factor: 5.103

7.  Flexible use of nuclear import pathways by HIV-1.

Authors:  KyeongEun Lee; Zandrea Ambrose; Thomas D Martin; Ilker Oztop; Alok Mulky; John G Julias; Nick Vandegraaff; Joerg G Baumann; Rui Wang; Wendy Yuen; Taichiro Takemura; Kenneth Shelton; Ichiro Taniuchi; Yuan Li; Joseph Sodroski; Dan R Littman; John M Coffin; Stephen H Hughes; Derya Unutmaz; Alan Engelman; Vineet N KewalRamani
Journal:  Cell Host Microbe       Date:  2010-03-18       Impact factor: 21.023

8.  Virion stiffness regulates immature HIV-1 entry.

Authors:  Hong-Bo Pang; Liron Hevroni; Nitzan Kol; Debra M Eckert; Marianna Tsvitov; Michael S Kay; Itay Rousso
Journal:  Retrovirology       Date:  2013-01-10       Impact factor: 4.602

9.  Analysis of the mechanical properties of wild type and hyperstable mutants of the HIV-1 capsid.

Authors:  Ruben Ramalho; Sanela Rankovic; Jing Zhou; Christopher Aiken; Itay Rousso
Journal:  Retrovirology       Date:  2016-03-15       Impact factor: 4.602

10.  HIV-1 evades innate immune recognition through specific cofactor recruitment.

Authors:  Mahdad Noursadeghi; Greg J Towers; Jane Rasaiyaah; Choon Ping Tan; Adam J Fletcher; Amanda J Price; Caroline Blondeau; Laura Hilditch; David A Jacques; David L Selwood; Leo C James
Journal:  Nature       Date:  2013-11-06       Impact factor: 49.962

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  47 in total

1.  A Novel Phenotype Links HIV-1 Capsid Stability to cGAS-Mediated DNA Sensing.

Authors:  Mohammad Adnan Siddiqui; Akatsuki Saito; Upul D Halambage; Damien Ferhadian; Douglas K Fischer; Ashwanth C Francis; Gregory B Melikyan; Zandrea Ambrose; Christopher Aiken; Masahiro Yamashita
Journal:  J Virol       Date:  2019-07-30       Impact factor: 5.103

2.  HIV-1 uncoating occurs via a series of rapid biomechanical changes in the core related to individual stages of reverse transcription.

Authors:  Sanela Rankovic; Akshay Deshpande; Shimon Harel; Christopher Aiken; Itay Rousso
Journal:  J Virol       Date:  2021-03-10       Impact factor: 5.103

Review 3.  Inhibitors of the HIV-1 capsid, a target of opportunity.

Authors:  Stephanie K Carnes; Jonathan H Sheehan; Christopher Aiken
Journal:  Curr Opin HIV AIDS       Date:  2018-07       Impact factor: 4.283

4.  Localized Phosphorylation of a Kinesin-1 Adaptor by a Capsid-Associated Kinase Regulates HIV-1 Motility and Uncoating.

Authors:  Viacheslav Malikov; Mojgan H Naghavi
Journal:  Cell Rep       Date:  2017-09-19       Impact factor: 9.423

5.  Saccharomyces cerevisiae RNA lariat debranching enzyme, Dbr1p, is required for completion of reverse transcription by the retrovirus-like element Ty1 and cleaves branched Ty1 RNAs.

Authors:  Thomas M Menees
Journal:  Mol Genet Genomics       Date:  2021-01-19       Impact factor: 3.291

Review 6.  Restriction of HIV-1 and other retroviruses by TRIM5.

Authors:  Barbie K Ganser-Pornillos; Owen Pornillos
Journal:  Nat Rev Microbiol       Date:  2019-07-16       Impact factor: 60.633

7.  PF74 Reinforces the HIV-1 Capsid To Impair Reverse Transcription-Induced Uncoating.

Authors:  Sanela Rankovic; Ruben Ramalho; Christopher Aiken; Itay Rousso
Journal:  J Virol       Date:  2018-09-26       Impact factor: 5.103

8.  Capsid Lattice Destabilization Leads to Premature Loss of the Viral Genome and Integrase Enzyme during HIV-1 Infection.

Authors:  Jenna E Eschbach; Jennifer L Elliott; Wen Li; Kaneil K Zadrozny; Keanu Davis; Shawn J Mohammed; Dana Q Lawson; Owen Pornillos; Alan N Engelman; Sebla B Kutluay
Journal:  J Virol       Date:  2020-12-22       Impact factor: 5.103

9.  Reconstitution and visualization of HIV-1 capsid-dependent replication and integration in vitro.

Authors:  Devin E Christensen; Barbie K Ganser-Pornillos; Jarrod S Johnson; Owen Pornillos; Wesley I Sundquist
Journal:  Science       Date:  2020-10-09       Impact factor: 47.728

10.  You can keep your coat on.

Authors:  Gregory J Bedwell; Alan N Engelman
Journal:  Elife       Date:  2021-06-01       Impact factor: 8.140

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