Literature DB >> 28374195

PathBot: A Radiology-Pathology Correlation Dashboard.

Linda C Kelahan1, Amit D Kalaria2, Ross W Filice2,3.   

Abstract

Pathology is considered the "gold standard" of diagnostic medicine. The importance of radiology-pathology correlation is seen in interdepartmental patient conferences such as "tumor boards" and by the tradition of radiology resident immersion in a radiologic-pathology course at the American Institute of Radiologic Pathology. In practice, consistent pathology follow-up can be difficult due to time constraints and cumbersome electronic medical records. We present a radiology-pathology correlation dashboard that presents radiologists with pathology reports matched to their dictations, for both diagnostic imaging and image-guided procedures. In creating our dashboard, we utilized the RadLex ontology and National Center for Biomedical Ontology (NCBO) Annotator to identify anatomic concepts in pathology reports that could subsequently be mapped to relevant radiology reports, providing an automated method to match related radiology and pathology reports. Radiology-pathology matches are presented to the radiologist on a web-based dashboard. We found that our algorithm was highly specific in detecting matches. Our sensitivity was slightly lower than expected and could be attributed to missing anatomy concepts in the RadLex ontology, as well as limitations in our parent term hierarchical mapping and synonym recognition algorithms. By automating radiology-pathology correlation and presenting matches in a user-friendly dashboard format, we hope to encourage pathology follow-up in clinical radiology practice for purposes of self-education and to augment peer review. We also hope to provide a tool to facilitate the production of quality teaching files, lectures, and publications. Diagnostic images have a richer educational value when they are backed up by the gold standard of pathology.

Entities:  

Keywords:  Dashboard; Medical records systems; RadLex; Radiology teaching files; Radiology workflow; Radiology-pathology correlation

Mesh:

Year:  2017        PMID: 28374195      PMCID: PMC5681468          DOI: 10.1007/s10278-017-9969-2

Source DB:  PubMed          Journal:  J Digit Imaging        ISSN: 0897-1889            Impact factor:   4.056


  14 in total

1.  Comparison-Bot: an Automated Preliminary-Final Report Comparison System.

Authors:  Amit D Kalaria; Ross W Filice
Journal:  J Digit Imaging       Date:  2016-06       Impact factor: 4.056

2.  RadLex: a new method for indexing online educational materials.

Authors:  Curtis P Langlotz
Journal:  Radiographics       Date:  2006 Nov-Dec       Impact factor: 5.333

3.  A data warehouse for integrating radiologic and pathologic data.

Authors:  Daniel L Rubin; Terry S Desser
Journal:  J Am Coll Radiol       Date:  2008-03       Impact factor: 5.532

Review 4.  RADPEER scoring white paper.

Authors:  Valerie P Jackson; Trudie Cushing; Hani H Abujudeh; James P Borgstede; Kenneth W Chin; Charles K Grimes; David B Larson; Paul A Larson; Robert S Pyatt; William T Thorwarth
Journal:  J Am Coll Radiol       Date:  2009-01       Impact factor: 5.532

5.  Trainee report dashboard: tool for enhancing feedback to radiology trainees about their reports.

Authors:  Richard J T Gorniak; Adam E Flanders; Richard E Sharpe
Journal:  Radiographics       Date:  2013-08-26       Impact factor: 5.333

6.  Masters of radiology panel discussion: defining a quality dashboard for radiology--what are the right metrics?

Authors:  Howard P Forman; David B Larson; Ella A Kazerooni; Alexander Norbash; John K Crowe; Marcia C Javitt; Norman J Beauchamp
Journal:  AJR Am J Roentgenol       Date:  2013-04       Impact factor: 3.959

7.  Utilization of dashboard technology in academic radiology departments: results of a national survey.

Authors:  Bahar Mansoori; Ronald D Novak; Carlos J Sivit; Pablo R Ros
Journal:  J Am Coll Radiol       Date:  2013-04       Impact factor: 5.532

8.  JOURNAL CLUB: Assessment of Interobserver Variability in the Peer Review Process: Should We Agree to Disagree?

Authors:  Nupur Verma; Daniel S Hippe; Jeffrey D Robinson
Journal:  AJR Am J Roentgenol       Date:  2016-08-17       Impact factor: 3.959

9.  Call Case Dashboard: Tracking R1 Exposure to High-Acuity Cases Using Natural Language Processing.

Authors:  Linda C Kelahan; Allan Fong; Raj M Ratwani; Ross W Filice
Journal:  J Am Coll Radiol       Date:  2016-05-06       Impact factor: 5.532

10.  The open biomedical annotator.

Authors:  Clement Jonquet; Nigam H Shah; Mark A Musen
Journal:  Summit Transl Bioinform       Date:  2009-03-01
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  4 in total

1.  Educational Impact of Trainee-Facilitated Head and Neck Radiology-Pathology Correlation Conferences.

Authors:  Daniel Thomas Ginat; Nicole A Cipriani; Gregory Christoforidis
Journal:  Head Neck Pathol       Date:  2018-05-17

Review 2.  Standard Lexicons, Coding Systems and Ontologies for Interoperability and Semantic Computation in Imaging.

Authors:  Kenneth C Wang
Journal:  J Digit Imaging       Date:  2018-06       Impact factor: 4.056

3.  Pathophysiological Changes in Rhesus Monkeys with Paraquat-Induced Pulmonary Fibrosis.

Authors:  Mingyang Shao; Sha Yang; Aiyi Zheng; Zhenru Wu; Menglin Chen; Rong Yao; Yujun Shi; Gen Chen
Journal:  Lung       Date:  2022-09-26       Impact factor: 3.777

4.  Segmentation and Classification in Digital Pathology for Glioma Research: Challenges and Deep Learning Approaches.

Authors:  Tahsin Kurc; Spyridon Bakas; Xuhua Ren; Aditya Bagari; Alexandre Momeni; Yue Huang; Lichi Zhang; Ashish Kumar; Marc Thibault; Qi Qi; Qian Wang; Avinash Kori; Olivier Gevaert; Yunlong Zhang; Dinggang Shen; Mahendra Khened; Xinghao Ding; Ganapathy Krishnamurthi; Jayashree Kalpathy-Cramer; James Davis; Tianhao Zhao; Rajarsi Gupta; Joel Saltz; Keyvan Farahani
Journal:  Front Neurosci       Date:  2020-02-21       Impact factor: 4.677

  4 in total

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