Literature DB >> 28371464

Enzymatic Synthesis of 7',5'-Bicyclo-DNA Oligonucleotides.

Stella Diafa1, Damien Evéquoz1, Christian J Leumann1, Marcel Hollenstein2.   

Abstract

The selection of artificial genetic polymers with tailor-made properties for their application in synthetic biology requires the exploration of new nucleosidic scaffolds that can be used in selection experiments. Herein, we describe the synthesis of a bicyclo-DNA triphosphate (i.e., 7',5'-bc-TTP) and show its potential to serve for the generation of new xenonucleic acids (XNAs) based on this scaffold. 7',5'-bc-TTP is a good substrate for Therminator DNA polymerase, and up to seven modified units can be incorporated into a growing DNA chain. In addition, this scaffold sustains XNA-dependent DNA synthesis and potentially also XNA-dependent XNA synthesis. However, DNA-dependent XNA synthesis on longer templates is hampered by competitive misincorporation of deoxyadenosine triphosphate (dATP) caused by the slow rate of incorporation of 7',5'-bc-TTP.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  DNA polymerases; bicyclo-DNA; modified nucleic acids; nucleoside triphosphates; oligonucleotides

Mesh:

Substances:

Year:  2017        PMID: 28371464     DOI: 10.1002/asia.201700374

Source DB:  PubMed          Journal:  Chem Asian J        ISSN: 1861-471X


  3 in total

1.  Double-headed nucleotides as xeno nucleic acids: information storage and polymerase recognition.

Authors:  Kasper M Beck; Marie B Krogh; Mick Hornum; Paul T Ludford; Yitzhak Tor; Poul Nielsen
Journal:  Org Biomol Chem       Date:  2020-09-23       Impact factor: 3.876

Review 2.  Nucleic Acid Aptamers: Emerging Applications in Medical Imaging, Nanotechnology, Neurosciences, and Drug Delivery.

Authors:  Pascal Röthlisberger; Cécile Gasse; Marcel Hollenstein
Journal:  Int J Mol Sci       Date:  2017-11-16       Impact factor: 5.923

Review 3.  Therminator DNA Polymerase: Modified Nucleotides and Unnatural Substrates.

Authors:  Andrew F Gardner; Kiserian M Jackson; Madeleine M Boyle; Jackson A Buss; Vladimir Potapov; Alexandra M Gehring; Kelly M Zatopek; Ivan R Corrêa; Jennifer L Ong; William E Jack
Journal:  Front Mol Biosci       Date:  2019-04-24
  3 in total

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