Literature DB >> 28371055

When mechanism matters: Bayesian forecasting using models of ecological diffusion.

Trevor J Hefley1, Mevin B Hooten2, Robin E Russell3, Daniel P Walsh3, James A Powell4.   

Abstract

Ecological diffusion is a theory that can be used to understand and forecast spatio-temporal processes such as dispersal, invasion, and the spread of disease. Hierarchical Bayesian modelling provides a framework to make statistical inference and probabilistic forecasts, using mechanistic ecological models. To illustrate, we show how hierarchical Bayesian models of ecological diffusion can be implemented for large data sets that are distributed densely across space and time. The hierarchical Bayesian approach is used to understand and forecast the growth and geographic spread in the prevalence of chronic wasting disease in white-tailed deer (Odocoileus virginianus). We compare statistical inference and forecasts from our hierarchical Bayesian model to phenomenological regression-based methods that are commonly used to analyse spatial occurrence data. The mechanistic statistical model based on ecological diffusion led to important ecological insights, obviated a commonly ignored type of collinearity, and was the most accurate method for forecasting.
© 2017 John Wiley & Sons Ltd/CNRS.

Entities:  

Keywords:  Agent-based model; Bayesian analysis; boosted regression trees; dispersal; generalised additive model; invasion; partial differential equation; prediction; spatial confounding

Mesh:

Year:  2017        PMID: 28371055     DOI: 10.1111/ele.12763

Source DB:  PubMed          Journal:  Ecol Lett        ISSN: 1461-023X            Impact factor:   9.492


  8 in total

Review 1.  Confronting models with data: the challenges of estimating disease spillover.

Authors:  Paul C Cross; Diann J Prosser; Andrew M Ramey; Ephraim M Hanks; Kim M Pepin
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2019-08-12       Impact factor: 6.237

2.  What processes must we understand to forecast regional-scale population dynamics?

Authors:  Jesse R Lasky; Mevin B Hooten; Peter B Adler
Journal:  Proc Biol Sci       Date:  2020-12-09       Impact factor: 5.349

3.  A Mechanistic Model of Annual Sulfate Concentrations in the United States.

Authors:  Nathan B Wikle; Ephraim M Hanks; Lucas R F Henneman; Corwin M Zigler
Journal:  J Am Stat Assoc       Date:  2022-03-17       Impact factor: 4.369

4.  28 Models Later: Model Competition and the Zombie Apocalypse.

Authors:  Ian McGahan; James Powell; Elizabeth Spencer
Journal:  Bull Math Biol       Date:  2021-01-16       Impact factor: 1.758

Review 5.  A practical guide to selecting models for exploration, inference, and prediction in ecology.

Authors:  Andrew T Tredennick; Giles Hooker; Stephen P Ellner; Peter B Adler
Journal:  Ecology       Date:  2021-05-04       Impact factor: 5.499

6.  Diffusion modeling reveals effects of multiple release sites and human activity on a recolonizing apex predator.

Authors:  Joseph M Eisaguirre; Perry J Williams; Xinyi Lu; Michelle L Kissling; William S Beatty; George G Esslinger; Jamie N Womble; Mevin B Hooten
Journal:  Mov Ecol       Date:  2021-06-30       Impact factor: 3.600

7.  Assessment of spatial genetic structure to identify populations at risk for infection of an emerging epizootic disease.

Authors:  William L Miller; Cassandra M Miller-Butterworth; Duane R Diefenbach; W David Walter
Journal:  Ecol Evol       Date:  2020-04-22       Impact factor: 2.912

8.  Can genetic assignment tests provide insight on the influence of captive egression on the epizootiology of chronic wasting disease?

Authors:  William L Miller; W David Walter
Journal:  Evol Appl       Date:  2019-12-09       Impact factor: 5.183

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.