Literature DB >> 28370286

The Generation and Validation of a 20-Genes Model Influencing the Prognosis of Colorectal Cancer.

Xiao-Jun Xie1, Ping Liu2, Chu-Dong Cai3, Ying-Ru Zhuang4, Li Zhang5, Hai-Wen Zhuang6.   

Abstract

Colorectal cancer is a common malignant tumor with high incidence affecting the digestive system. This study aimed to identify the key genes relating to prognosis of colorectal cancer and to construct a prognostic model for its risk evaluation. Gene expression profiling of colorectal cancer patients, GSE17537, was downloaded from Gene Expression Omnibus database (GEO). A total of 55 samples from patients ranging from stages 1 to 4 were available. Differentially expressed genes were screened, with which single factor survival analysis was performed to identify the response genes. Interacting network and KEGG enrichment analysis of responsive genes were performed to identify key genes. In return, Fisher enrichment analysis, literature mining, and Kaplan-Meier analysis were used to verify the effectiveness of the prognostic model. The 20-gene model generated in this study posed significant influences on the prognoses (P = 9.691065e-09). Significance was verified via independent dataset GSE38832 (P = 9.86581e-07) and GSE17536 (P = 2.741e-08). The verified effective 20-gene model could be utilized to predict prognosis of patients with colorectal cancer and would contribute to post-operational treatment and follow-up strategies. J. Cell. Biochem. 118: 3675-3685, 2017.
© 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  COLORECTAL CANCER; DIFFERENTIALLY EXPRESSED GENES; FISHER ENRICHMENT TEST; KEGG ENRICHMENT ANALYSIS; PROGNOSTIC MODEL

Mesh:

Year:  2017        PMID: 28370286     DOI: 10.1002/jcb.26013

Source DB:  PubMed          Journal:  J Cell Biochem        ISSN: 0730-2312            Impact factor:   4.429


  2 in total

1.  Large-scale analysis reveals a novel risk score to predict overall survival in hepatocellular carcinoma.

Authors:  Yujia Zheng; Yulin Liu; Songfeng Zhao; Zhetian Zheng; Chunyi Shen; Li An; Yongliang Yuan
Journal:  Cancer Manag Res       Date:  2018-11-21       Impact factor: 3.989

2.  Prognostic Risk Model of Immune-Related Genes in Colorectal Cancer.

Authors:  Yucheng Qian; Jingsun Wei; Wei Lu; Fangfang Sun; Maxwell Hwang; Kai Jiang; Dongliang Fu; Xinyi Zhou; Xiangxing Kong; Yingshuang Zhu; Qian Xiao; Yeting Hu; Kefeng Ding
Journal:  Front Genet       Date:  2021-03-04       Impact factor: 4.599

  2 in total

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