Literature DB >> 28369507

Nitrate signaling and early responses in Arabidopsis roots.

Soledad F Undurraga1, Catalina Ibarra-Henríquez1, Isabel Fredes1, José Miguel Álvarez1, Rodrigo A Gutiérrez1.   

Abstract

Nitrogen (N) is an essential macronutrient that impacts many aspects of plant physiology, growth, and development. Besides its nutritional role, N nutrient and metabolites act as signaling molecules that regulate the expression of a wide range of genes and biological processes. In this review, we describe recent advances in the understanding of components of the nitrate signaling pathway. Recent evidence posits that in one nitrate signaling pathway, nitrate sensed by NRT1.1 activates a phospholipase C activity that is necessary for increased cytosolic calcium levels. The nitrate-elicited calcium increase presumably activates calcium sensors, kinases, or phosphatases, resulting in changes in expression of primary nitrate response genes. Consistent with this model, nitrate treatments elicit proteome-wide changes in phosphorylation patterns in a wide range of proteins, including transporters, metabolic enzymes, kinases, phosphatases, and other regulatory proteins. Identifying and characterizing the function of the different players involved in this and other nitrate signaling pathways and their functional relationships is the next step to understand N responses in plants.
© The Author 2017. Published by Oxford University Press on behalf of the Society for Experimental Biology. All rights reserved. For permissions, please email: journals.permissions@oup.com.

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Keywords:  Gene expression; nitrate; nitrogen; phospholipase C; phosphorylation; primary response; signaling.

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Year:  2017        PMID: 28369507      PMCID: PMC5854014          DOI: 10.1093/jxb/erx041

Source DB:  PubMed          Journal:  J Exp Bot        ISSN: 0022-0957            Impact factor:   6.992


  106 in total

1.  Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1,000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism.

Authors:  Rongchen Wang; Mamoru Okamoto; Xiujuan Xing; Nigel M Crawford
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

2.  Root-derived cytokinins as long-distance signals for NO3--induced stimulation of leaf growth.

Authors:  Yuni Sri Rahayu; Pia Walch-Liu; Günter Neumann; Volker Römheld; Nikolaus von Wirén; Fritz Bangerth
Journal:  J Exp Bot       Date:  2005-02-14       Impact factor: 6.992

3.  A central role for the nitrate transporter NRT2.1 in the integrated morphological and physiological responses of the root system to nitrogen limitation in Arabidopsis.

Authors:  Tony Remans; Philippe Nacry; Marjorie Pervent; Thomas Girin; Pascal Tillard; Marc Lepetit; Alain Gojon
Journal:  Plant Physiol       Date:  2006-01-13       Impact factor: 8.340

4.  Phosphatidylinositol 4,5-bisphosphate binding to the pleckstrin homology domain of phospholipase C-delta1 enhances enzyme activity.

Authors:  J W Lomasney; H F Cheng; L P Wang; Y Kuan; S Liu; S W Fesik; K King
Journal:  J Biol Chem       Date:  1996-10-11       Impact factor: 5.157

Review 5.  Plant phosphoinositide-specific phospholipase C: an insight.

Authors:  Sunny D Rupwate; Ram Rajasekharan
Journal:  Plant Signal Behav       Date:  2012-08-20

Review 6.  Plant PA signaling via diacylglycerol kinase.

Authors:  Steven A Arisz; Christa Testerink; Teun Munnik
Journal:  Biochim Biophys Acta       Date:  2009-04-24

Review 7.  Transcriptional networks in the nitrate response of Arabidopsis thaliana.

Authors:  Elena A Vidal; José M Álvarez; Tomás C Moyano; Rodrigo A Gutiérrez
Journal:  Curr Opin Plant Biol       Date:  2015-08-03       Impact factor: 7.834

8.  Systems approaches map regulatory networks downstream of the auxin receptor AFB3 in the nitrate response of Arabidopsis thaliana roots.

Authors:  Elena A Vidal; Tomás C Moyano; Eleodoro Riveras; Orlando Contreras-López; Rodrigo A Gutiérrez
Journal:  Proc Natl Acad Sci U S A       Date:  2013-07-11       Impact factor: 11.205

Review 9.  Nitrogen regulation of root branching.

Authors:  Pia Walch-Liu; Igor I Ivanov; Sophie Filleur; Yinbo Gan; Tony Remans; Brian G Forde
Journal:  Ann Bot       Date:  2005-12-09       Impact factor: 4.357

10.  Crystal structure of the plant dual-affinity nitrate transporter NRT1.1.

Authors:  Ji Sun; John R Bankston; Jian Payandeh; Thomas R Hinds; William N Zagotta; Ning Zheng
Journal:  Nature       Date:  2014-02-26       Impact factor: 49.962

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  16 in total

Review 1.  Role of protein phosphatases in the regulation of nitrogen nutrition in plants.

Authors:  Lekshmy Sathee; G K Krishna; Sandeep B Adavi; Shailendra K Jha; Vanita Jain
Journal:  Physiol Mol Biol Plants       Date:  2021-12-24

2.  Comparative Transcriptome Analysis Reveals Common and Developmental Stage-Specific Genes That Respond to Low Nitrogen in Maize Leaves.

Authors:  Song Guo; Adnan Arshad; Lan Yang; Yusheng Qin; Xiaohuan Mu; Guohua Mi
Journal:  Plants (Basel)       Date:  2022-06-10

3.  Tobacco plants expressing the maize nitrate transporter ZmNrt2.1 exhibit altered responses of growth and gene expression to nitrate and calcium.

Authors:  Abubakar Ibrahim; Xiao-Lu Jin; Yu-Bin Zhang; Jessica Cruz; Paveena Vichyavichien; Nwadiuto Esiobu; Xing-Hai Zhang
Journal:  Bot Stud       Date:  2017-11-15       Impact factor: 2.787

4.  Nitrogen nutrition in plants: rapid progress and new challenges.

Authors:  Alain Gojon
Journal:  J Exp Bot       Date:  2017-05-01       Impact factor: 6.992

Review 5.  Nitrate Signaling, Functions, and Regulation of Root System Architecture: Insights from Arabidopsis thaliana.

Authors:  Muhammad Asim; Zia Ullah; Fangzheng Xu; Lulu An; Oluwaseun Olayemi Aluko; Qian Wang; Haobao Liu
Journal:  Genes (Basel)       Date:  2020-06-09       Impact factor: 4.096

6.  Ammonium and nitrate regulate NH4+ uptake activity of Arabidopsis ammonium transporter AtAMT1;3 via phosphorylation at multiple C-terminal sites.

Authors:  Xiangyu Wu; Ting Liu; Yongjian Zhang; Fengying Duan; Benjamin Neuhäuser; Uwe Ludewig; Waltraud X Schulze; Lixing Yuan
Journal:  J Exp Bot       Date:  2019-09-24       Impact factor: 6.992

Review 7.  Calcium signaling networks mediate nitrate sensing and responses in Arabidopsis.

Authors:  Li Liu; Huanhuan Gao; Shaoxuan Li; Zhen Han; Bo Li
Journal:  Plant Signal Behav       Date:  2021-06-27

8.  A Nitrogen Molecular Sensing System, Comprised of the ALLANTOINASE and UREIDE PERMEASE 1 Genes, Can Be Used to Monitor N Status in Rice.

Authors:  Dong-Keun Lee; Mark C F R Redillas; Harin Jung; Seowon Choi; Youn Shic Kim; Ju-Kon Kim
Journal:  Front Plant Sci       Date:  2018-04-18       Impact factor: 5.753

9.  Phylogeny and gene expression of the complete NITRATE TRANSPORTER 1/PEPTIDE TRANSPORTER FAMILY in Triticum aestivum.

Authors:  Huadun Wang; Yongfang Wan; Peter Buchner; Robert King; Hongxiang Ma; Malcolm J Hawkesford
Journal:  J Exp Bot       Date:  2020-07-25       Impact factor: 6.992

10.  High-resolution profile of transcriptomes reveals a role of alternative splicing for modulating response to nitrogen in maize.

Authors:  Yuancong Wang; Jinyan Xu; Min Ge; Lihua Ning; Mengmei Hu; Han Zhao
Journal:  BMC Genomics       Date:  2020-05-11       Impact factor: 3.969

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