Literature DB >> 28364239

Use of Translation Blocking Morpholinos for Gene Knockdown in Giardia lamblia.

Jana Krtková1,2, Alexander R Paredez3.   

Abstract

Giardia lamblia, a major parasite, is an emerging model organism due to its compact genomic arrangement and composition. The most popular reverse genetic technique, RNAi, is ineffective in Giardia. In contrast, protein depletion by translation blocking morpholinos is suitable for most gene targets and provides up to 80% depletion of the target protein. The method is fast, reliable, and specific. After antisense morpholino oligomer delivery into Giardia trophozoites by electroporation, the cells can be used for many subsequent analyses 8-48 h after treatment. In this chapter, suitable gene tags, plasmids, and techniques necessary for proper morpholino targeting are described.

Entities:  

Keywords:  Giardia; Integration; Knockdown; Morpholino; Quantitative Western blotting

Mesh:

Substances:

Year:  2017        PMID: 28364239     DOI: 10.1007/978-1-4939-6817-6_11

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  9 in total

1.  Exons 45-55 Skipping Using Mutation-Tailored Cocktails of Antisense Morpholinos in the DMD Gene.

Authors:  Yusuke Echigoya; Kenji Rowel Q Lim; Dyanna Melo; Bo Bao; Nhu Trieu; Yoshitaka Mizobe; Rika Maruyama; Kamel Mamchaoui; Jun Tanihata; Yoshitsugu Aoki; Shin'ichi Takeda; Vincent Mouly; William Duddy; Toshifumi Yokota
Journal:  Mol Ther       Date:  2019-07-26       Impact factor: 11.454

2.  Myosin-independent cytokinesis in Giardia utilizes flagella to coordinate force generation and direct membrane trafficking.

Authors:  William R Hardin; Renyu Li; Jason Xu; Andrew M Shelton; Germain C M Alas; Vladimir N Minin; Alexander R Paredez
Journal:  Proc Natl Acad Sci U S A       Date:  2017-07-05       Impact factor: 11.205

3.  14-3-3 Regulates Actin Filament Formation in the Deep-Branching Eukaryote Giardia lamblia.

Authors:  Jana Krtková; Jennifer Xu; Marco Lalle; Melissa Steele-Ogus; Germain C M Alas; David Sept; Alexander R Paredez
Journal:  mSphere       Date:  2017-09-13       Impact factor: 4.389

4.  Nek8445, a protein kinase required for microtubule regulation and cytokinesis in Giardia lamblia.

Authors:  Kelly M Hennessey; Germain C M Alas; Ilse Rogiers; Renyu Li; Ethan A Merritt; Alexander R Paredez
Journal:  Mol Biol Cell       Date:  2020-05-27       Impact factor: 4.138

5.  Eukaryote-Conserved Methylarginine Is Absent in Diplomonads and Functionally Compensated in Giardia.

Authors:  Samantha J Emery-Corbin; Joshua J Hamey; Brendan R E Ansell; Balu Balan; Swapnil Tichkule; Andreas J Stroehlein; Crystal Cooper; Bernie V McInerney; Soroor Hediyeh-Zadeh; Daniel Vuong; Andrew Crombie; Ernest Lacey; Melissa J Davis; Marc R Wilkins; Melanie Bahlo; Staffan G Svärd; Robin B Gasser; Aaron R Jex
Journal:  Mol Biol Evol       Date:  2020-12-16       Impact factor: 16.240

6.  The Giardia ventrolateral flange is a lamellar membrane protrusion that supports attachment.

Authors:  William R Hardin; Germain C M Alas; Nikita Taparia; Elizabeth B Thomas; Melissa C Steele-Ogus; Kelli L Hvorecny; Aaron R Halpern; Pavla Tůmová; Justin M Kollman; Joshua C Vaughan; Nathan J Sniadecki; Alexander R Paredez
Journal:  PLoS Pathog       Date:  2022-04-28       Impact factor: 7.464

7.  Robust and stable transcriptional repression in Giardia using CRISPRi.

Authors:  S G McInally; K D Hagen; C Nosala; J Williams; K Nguyen; J Booker; K Jones; Scott C Dawson
Journal:  Mol Biol Cell       Date:  2018-10-31       Impact factor: 4.138

Review 8.  Viruses of protozoan parasites and viral therapy: Is the time now right?

Authors:  Paul Barrow; Jean Claude Dujardin; Nicolas Fasel; Alex D Greenwood; Klaus Osterrieder; George Lomonossoff; Pier Luigi Fiori; Robert Atterbury; Matteo Rossi; Marco Lalle
Journal:  Virol J       Date:  2020-09-29       Impact factor: 4.099

9.  Disc and Actin Associated Protein 1 influences attachment in the intestinal parasite Giardia lamblia.

Authors:  Melissa C Steele-Ogus; Ava M Obenaus; Nathan J Sniadecki; Alexander R Paredez
Journal:  PLoS Pathog       Date:  2022-03-25       Impact factor: 6.823

  9 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.