Literature DB >> 28357518

Longitudinal relaxation optimized amide 1H-CEST experiments for studying slow chemical exchange processes in fully protonated proteins.

Tairan Yuwen1, Lewis E Kay2,3.   

Abstract

Chemical Exchange Saturation Transfer (CEST) experiments are increasingly used to study slow timescale exchange processes in biomolecules. Although 15N- and 13C-CEST have been the approaches of choice, the development of spin state selective 1H-CEST pulse sequences that separate the effects of chemical and dipolar exchange [T. Yuwen, A. Sekhar and L. E. Kay, Angew Chem Int Ed Engl 2016 doi: 10.1002/anie.201610759 (Yuwen et al. 2017)] significantly increases the utility of 1H-based experiments. Pulse schemes have been described previously for studies of highly deuterated proteins. We present here longitudinal-relaxation optimized amide 1H-CEST experiments for probing chemical exchange in protonated proteins. Applications involving a pair of proteins are presented establishing that accurate 1H chemical shifts of sparsely populated conformers can be obtained from simple analyses of 1H-CEST profiles. A discussion of the inherent differences between 15N-/13C- and 1H-CEST experiments is presented, leading to an optimal strategy for recording 1H-CEST experiments.

Entities:  

Keywords:  1H chemical exchange saturation transfer; Protein dynamics; Rare conformational states; Slow exchange

Mesh:

Substances:

Year:  2017        PMID: 28357518     DOI: 10.1007/s10858-017-0104-y

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  40 in total

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Authors:  K V Pervushin; G Wider; K Wüthrich
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Authors:  Peter C M van Zijl; Nirbhay N Yadav
Journal:  Magn Reson Med       Date:  2011-02-17       Impact factor: 4.668

10.  Longitudinal (1)H relaxation optimization in TROSY NMR spectroscopy.

Authors:  Konstantin Pervushin; Beat Vögeli; Alexander Eletsky
Journal:  J Am Chem Soc       Date:  2002-10-30       Impact factor: 15.419

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