Literature DB >> 28352668

Genomic profiling reveals mutational landscape in parathyroid carcinomas.

Chetanya Pandya1, Andrew V Uzilov1, Justin Bellizzi2, Chun Yee Lau1, Aye S Moe1, Maya Strahl1, Wissam Hamou1, Leah C Newman1, Marc Y Fink1, Yevgeniy Antipin1, Willie Yu3, Mark Stevenson4, Branca M Cavaco5, Bin T Teh6,7, Rajesh V Thakker4, Hans Morreau8, Eric E Schadt1, Robert Sebra1, Shuyu D Li1, Andrew Arnold2, Rong Chen1.   

Abstract

Parathyroid carcinoma (PC) is an extremely rare malignancy lacking effective therapeutic intervention. We generated and analyzed whole-exome sequencing data from 17 patients to identify somatic and germline genetic alterations. A panel of selected genes was sequenced in a 7-tumor expansion cohort. We show that 47% (8 of 17) of the tumors harbor somatic mutations in the CDC73 tumor suppressor, with germline inactivating variants in 4 of the 8 patients. The PI3K/AKT/mTOR pathway was altered in 21% of the 24 cases, revealing a major oncogenic pathway in PC. We observed CCND1 amplification in 29% of the 17 patients, and a previously unreported recurrent mutation in putative kinase ADCK1. We identified the first sporadic PCs with somatic mutations in the Wnt canonical pathway, complementing previously described epigenetic mechanisms mediating Wnt activation. This is the largest genomic sequencing study of PC, and represents major progress toward a full molecular characterization of this rare malignancy to inform improved and individualized treatments.

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Year:  2017        PMID: 28352668      PMCID: PMC5358487          DOI: 10.1172/jci.insight.92061

Source DB:  PubMed          Journal:  JCI Insight        ISSN: 2379-3708


  71 in total

1.  Allelic imbalance in sporadic parathyroid carcinoma and evidence for its de novo origins.

Authors:  Jessica Costa-Guda; Yasuo Imanishi; Nallasivam Palanisamy; Norihiko Kawamata; H Phillip Koeffler; R S K Chaganti; Andrew Arnold
Journal:  Endocrine       Date:  2013-02-24       Impact factor: 3.633

2.  Frameshift Mutations of AKAP9 Gene in Gastric and Colorectal Cancers with High Microsatellite Instability.

Authors:  Yun Sol Jo; Min Sung Kim; Nam Jin Yoo; Sug Hyung Lee
Journal:  Pathol Oncol Res       Date:  2016-01-19       Impact factor: 3.201

3.  Activating PIK3CA alleles and lymphangiogenic phenotype of lymphatic endothelial cells isolated from lymphatic malformations.

Authors:  Alexander J Osborn; Peter Dickie; Derek E Neilson; Kathryn Glaser; Kaari A Lynch; Anita Gupta; Belinda Hsi Dickie
Journal:  Hum Mol Genet       Date:  2014-10-06       Impact factor: 6.150

4.  APC mutations are infrequent but present in human lung cancer.

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Journal:  Cancer Lett       Date:  2004-04-30       Impact factor: 8.679

5.  The parafibromin tumor suppressor protein inhibits cell proliferation by repression of the c-myc proto-oncogene.

Authors:  Ling Lin; Jian-Hua Zhang; Leelamma M Panicker; William F Simonds
Journal:  Proc Natl Acad Sci U S A       Date:  2008-11-05       Impact factor: 11.205

6.  Complete genomic landscape of a recurring sporadic parathyroid carcinoma.

Authors:  Katayoon Kasaian; Sam M Wiseman; Nina Thiessen; Karen L Mungall; Richard D Corbett; Jenny Q Qian; Ka Ming Nip; Ann He; Kane Tse; Eric Chuah; Richard J Varhol; Pawan Pandoh; Helen McDonald; Thomas Zeng; Angela Tam; Jacquie Schein; Inanc Birol; Andrew J Mungall; Richard A Moore; Yongjun Zhao; Martin Hirst; Marco A Marra; Blair A Walker; Steven J M Jones
Journal:  J Pathol       Date:  2013-07       Impact factor: 7.996

7.  dbNSFP v2.0: a database of human non-synonymous SNVs and their functional predictions and annotations.

Authors:  Xiaoming Liu; Xueqiu Jian; Eric Boerwinkle
Journal:  Hum Mutat       Date:  2013-07-10       Impact factor: 4.878

8.  Kinome-wide functional genomics screen reveals a novel mechanism of TNFα-induced nuclear accumulation of the HIF-1α transcription factor in cancer cells.

Authors:  Angela Schoolmeesters; Daniel D Brown; Yuriy Fedorov
Journal:  PLoS One       Date:  2012-02-15       Impact factor: 3.240

9.  COSMIC: exploring the world's knowledge of somatic mutations in human cancer.

Authors:  Simon A Forbes; David Beare; Prasad Gunasekaran; Kenric Leung; Nidhi Bindal; Harry Boutselakis; Minjie Ding; Sally Bamford; Charlotte Cole; Sari Ward; Chai Yin Kok; Mingming Jia; Tisham De; Jon W Teague; Michael R Stratton; Ultan McDermott; Peter J Campbell
Journal:  Nucleic Acids Res       Date:  2014-10-29       Impact factor: 16.971

10.  Ensembl 2016.

Authors:  Andrew Yates; Wasiu Akanni; M Ridwan Amode; Daniel Barrell; Konstantinos Billis; Denise Carvalho-Silva; Carla Cummins; Peter Clapham; Stephen Fitzgerald; Laurent Gil; Carlos García Girón; Leo Gordon; Thibaut Hourlier; Sarah E Hunt; Sophie H Janacek; Nathan Johnson; Thomas Juettemann; Stephen Keenan; Ilias Lavidas; Fergal J Martin; Thomas Maurel; William McLaren; Daniel N Murphy; Rishi Nag; Michael Nuhn; Anne Parker; Mateus Patricio; Miguel Pignatelli; Matthew Rahtz; Harpreet Singh Riat; Daniel Sheppard; Kieron Taylor; Anja Thormann; Alessandro Vullo; Steven P Wilder; Amonida Zadissa; Ewan Birney; Jennifer Harrow; Matthieu Muffato; Emily Perry; Magali Ruffier; Giulietta Spudich; Stephen J Trevanion; Fiona Cunningham; Bronwen L Aken; Daniel R Zerbino; Paul Flicek
Journal:  Nucleic Acids Res       Date:  2015-12-19       Impact factor: 16.971

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  26 in total

Review 1.  Evolution of Our Understanding of the Hyperparathyroid Syndromes: A Historical Perspective.

Authors:  Stephen J Marx; David Goltzman
Journal:  J Bone Miner Res       Date:  2018-12-10       Impact factor: 6.741

2.  CDK4/6 Dependence of Cyclin D1-Driven Parathyroid Neoplasia in Transgenic Mice.

Authors:  Jessica Costa-Guda; Kristin Corrado; Justin Bellizzi; Robert Romano; Elizabeth Saria; Kirsten Saucier; Madison Rose; Samip Shah; Cynthia Alander; Sanjay Mallya; Andrew Arnold
Journal:  Endocrinology       Date:  2020-10-01       Impact factor: 4.736

3.  Whole exome sequencing in familial isolated primary hyperparathyroidism.

Authors:  F Cetani; E Pardi; P Aretini; F Saponaro; S Borsari; L Mazoni; M Apicella; P Civita; M La Ferla; M A Caligo; F Lessi; C M Mazzanti; L Torregossa; A Oppo; C Marcocci
Journal:  J Endocrinol Invest       Date:  2019-09-05       Impact factor: 4.256

Review 4.  Parathyroid Carcinoma: a Review.

Authors:  Shikhar Sawhney; Richa Vaish; Siddhanth Jain; Neha Mittal; Suman Kumar Ankathi; Shivakumar Thiagarajan; Devendra Chaukar
Journal:  Indian J Surg Oncol       Date:  2021-06-03

5.  Case of Recurrent Primary Hyperparathyroidism, Congenital Granular Cell Tumor, and Aggressive Colorectal Cancer.

Authors:  Samina Afreen; Lee S Weinstein; William F Simonds; Smita Jha
Journal:  J Endocr Soc       Date:  2022-06-24

6.  Verification of candidate microRNA markers for parathyroid carcinoma.

Authors:  Ya Hu; Xiang Zhang; Ming Cui; Zhe Su; Mengyi Wang; Quan Liao; Yupei Zhao
Journal:  Endocrine       Date:  2018-02-16       Impact factor: 3.633

7.  Genomic Profiling of Parathyroid Carcinoma Reveals Genomic Alterations Suggesting Benefit from Therapy.

Authors:  Hyunseok Kang; Dean Pettinga; Adrian D Schubert; Paul W Ladenson; Douglas W Ball; Jon H Chung; Alexa B Schrock; Russell Madison; Garrett M Frampton; Phil J Stephens; Jeffrey S Ross; Vincent A Miller; Siraj M Ali
Journal:  Oncologist       Date:  2018-10-29

Review 8.  Parathyroid Pathology.

Authors:  Julie Guilmette; Peter M Sadow
Journal:  Surg Pathol Clin       Date:  2019-09-27

9.  Genotype of CDC73 germline mutation determines risk of parathyroid cancer.

Authors:  Yulong Li; Jianhua Zhang; Poorni R Adikaram; James Welch; Bin Guan; Lee S Weinstein; Haobin Chen; William F Simonds
Journal:  Endocr Relat Cancer       Date:  2020-09       Impact factor: 5.678

10.  Parafibromin Abnormalities in Ossifying Fibroma.

Authors:  Jessica Costa-Guda; Chetanya Pandya; Maya Strahl; Patricia Taik; Robert Sebra; Rong Chen; Andrew V Uzilov; Andrew Arnold
Journal:  J Endocr Soc       Date:  2021-05-08
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