Literature DB >> 28352647

Single-step Marker Switching in Schizosaccharomyces pombe Using a Lithium Acetate Transformation Protocol.

Simon D Brown1, Alexander Lorenz1.   

Abstract

The ability to utilize different selectable markers for tagging or mutating multiple genes in Schizosaccharomyces pombe is hampered by the historical use of only two selectable markers, ura4+ and kanMX6; the latter conferring resistance to the antibiotic G418 (geneticin). More markers have been described recently, but introducing these into yeast cells often requires strain construction from scratch. To overcome this problem we and other groups have created transformation cassettes with flanking homologies to ura4+ and kanMX6 which enable an efficient and time-saving way to exchange markers in existing mutated or tagged fission yeast strains. Here, we present a protocol for single-step marker switching by lithium acetate transformation in fission yeast, Schizosaccharomyces pombe. In the following we describe how to swap the ura4+ marker to a kanMX6, natMX4, or hphMX4 marker, which provide resistance against the antibiotics G418, nourseothricin (clonNAT) or hygromycin B, respectively. We also detail how to exchange any of the MX markers for nutritional markers, such as arg3+, his3+, leu1+ and ura4+ .

Entities:  

Keywords:  Gene deletion; Gene tagging; Genetic manipulation; Li-Acetate transformation; Marker switch; Schizosaccharomyces pombe; Selectable marker

Year:  2016        PMID: 28352647      PMCID: PMC5366253          DOI: 10.21769/BioProtoc.2075

Source DB:  PubMed          Journal:  Bio Protoc        ISSN: 2331-8325


  11 in total

1.  A vector system for efficient and economical switching of a ura4(+) module to three commonly used antibiotic marker cassettes in Schizosaccharomyces pombe.

Authors:  Yinghui Chen; Lihua Chen; Ke An; Yamei Wang; Quanwen Jin
Journal:  Yeast       Date:  2015-09-06       Impact factor: 3.239

2.  New drug-resistant cassettes for gene disruption and epitope tagging in Schizosaccharomyces pombe.

Authors:  Masamitsu Sato; Susheela Dhut; Takashi Toda
Journal:  Yeast       Date:  2005-05       Impact factor: 3.239

3.  Three new dominant drug resistance cassettes for gene disruption in Saccharomyces cerevisiae.

Authors:  A L Goldstein; J H McCusker
Journal:  Yeast       Date:  1999-10       Impact factor: 3.239

4.  Heterologous modules for efficient and versatile PCR-based gene targeting in Schizosaccharomyces pombe.

Authors:  J Bähler; J Q Wu; M S Longtine; N G Shah; A McKenzie; A B Steever; A Wach; P Philippsen; J R Pringle
Journal:  Yeast       Date:  1998-07       Impact factor: 3.239

5.  Genetic engineering of Schizosaccharomyces pombe: a system for gene disruption and replacement using the ura4 gene as a selectable marker.

Authors:  C Grimm; J Kohli; J Murray; K Maundrell
Journal:  Mol Gen Genet       Date:  1988-12

6.  Molecular cloning and characterization of the Schizosaccharomyces pombe his3 gene for use as a selectable marker.

Authors:  J D Burke; K L Gould
Journal:  Mol Gen Genet       Date:  1994-01

7.  New cassettes for single-step drug resistance and prototrophic marker switching in fission yeast.

Authors:  Alexander Lorenz
Journal:  Yeast       Date:  2015-09-17       Impact factor: 3.239

8.  arg3+, a new selection marker system for Schizosaccharomyces pombe: application of ura4+ as a removable integration marker.

Authors:  S Waddell; J R Jenkins
Journal:  Nucleic Acids Res       Date:  1995-05-25       Impact factor: 16.971

9.  Efficient targeted integration at leu1-32 and ura4-294 in Schizosaccharomyces pombe.

Authors:  J B Keeney; J D Boeke
Journal:  Genetics       Date:  1994-03       Impact factor: 4.562

10.  Three novel antibiotic marker cassettes for gene disruption and marker switching in Schizosaccharomyces pombe.

Authors:  Pierre Hentges; Benoit Van Driessche; Lionel Tafforeau; Jean Vandenhaute; Antony M Carr
Journal:  Yeast       Date:  2005-10-15       Impact factor: 3.239

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  4 in total

1.  Immediate visualization of recombination events and chromosome segregation defects in fission yeast meiosis.

Authors:  Dmitriy Li; Marianne Roca; Raif Yuecel; Alexander Lorenz
Journal:  Chromosoma       Date:  2019-02-09       Impact factor: 4.316

2.  Identification of antibiotics for use in selection of the chytrid fungi Batrachochytrium dendrobatidis and Batrachochytrium salamandrivorans.

Authors:  Kristyn A Robinson; Mallory Dunn; Shane P Hussey; Lillian K Fritz-Laylin
Journal:  PLoS One       Date:  2020-10-20       Impact factor: 3.240

3.  Genetic interactions between the chromosome axis-associated protein Hop1 and homologous recombination determinants in Schizosaccharomyces pombe.

Authors:  Simon David Brown; Olga Dorota Jarosinska; Alexander Lorenz
Journal:  Curr Genet       Date:  2018-03-17       Impact factor: 3.886

4.  DNA sequence differences are determinants of meiotic recombination outcome.

Authors:  Simon D Brown; Samantha J Mpaulo; Mimi N Asogwa; Marie Jézéquel; Matthew C Whitby; Alexander Lorenz
Journal:  Sci Rep       Date:  2019-11-11       Impact factor: 4.379

  4 in total

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