Literature DB >> 28351865

Using synthetic biology to explore principles of development.

Jamie Davies1.   

Abstract

Developmental biology is mainly analytical: researchers study embryos, suggest hypotheses and test them through experimental perturbation. From the results of many experiments, the community distils the principles thought to underlie embryogenesis. Verifying these principles, however, is a challenge. One promising approach is to use synthetic biology techniques to engineer simple genetic or cellular systems that follow these principles and to see whether they perform as expected. As I review here, this approach has already been used to test ideas of patterning, differentiation and morphogenesis. It is also being applied to evo-devo studies to explore alternative mechanisms of development and 'roads not taken' by natural evolution.
© 2017. Published by The Company of Biologists Ltd.

Entities:  

Keywords:  Differentiation; Morphogenesis; Pattern formation; Synthetic biology; Synthetic morphology; Validation

Mesh:

Year:  2017        PMID: 28351865     DOI: 10.1242/dev.144196

Source DB:  PubMed          Journal:  Development        ISSN: 0950-1991            Impact factor:   6.868


  27 in total

Review 1.  Synthetic embryology: controlling geometry to model early mammalian development.

Authors:  Jakob J Metzger; Mijo Simunovic; Ali H Brivanlou
Journal:  Curr Opin Genet Dev       Date:  2018-06-27       Impact factor: 5.578

2.  Engineering multicellular systems: using synthetic biology to control tissue self-organization.

Authors:  Marion B Johnson; Alexander R March; Leonardo Morsut
Journal:  Curr Opin Biomed Eng       Date:  2017-12

3.  Microfluidics on the fly: Inexpensive rapid fabrication of thermally laminated microfluidic devices for live imaging and multimodal perturbations of multicellular systems.

Authors:  Megan Levis; Nilay Kumar; Emily Apakian; Cesar Moreno; Ulises Hernandez; Ana Olivares; Fernando Ontiveros; Jeremiah J Zartman
Journal:  Biomicrofluidics       Date:  2019-04-26       Impact factor: 2.800

Review 4.  Programming Morphogenesis through Systems and Synthetic Biology.

Authors:  Jeremy J Velazquez; Emily Su; Patrick Cahan; Mo R Ebrahimkhani
Journal:  Trends Biotechnol       Date:  2017-12-08       Impact factor: 19.536

5.  Unifying synthetic embryology.

Authors:  Jake Cornwall-Scoones; Magdalena Zernicka-Goetz
Journal:  Dev Biol       Date:  2021-03-20       Impact factor: 3.582

Review 6.  Deconstructing and reconstructing the mouse and human early embryo.

Authors:  Marta N Shahbazi; Magdalena Zernicka-Goetz
Journal:  Nat Cell Biol       Date:  2018-07-23       Impact factor: 28.824

7.  Synthetic Developmental Biology: Understanding Through Reconstitution.

Authors:  Gavin Schlissel; Pulin Li
Journal:  Annu Rev Cell Dev Biol       Date:  2020-10-06       Impact factor: 13.827

8.  Programming self-organizing multicellular structures with synthetic cell-cell signaling.

Authors:  Satoshi Toda; Lucas R Blauch; Sindy K Y Tang; Leonardo Morsut; Wendell A Lim
Journal:  Science       Date:  2018-05-31       Impact factor: 47.728

Review 9.  Synthetic spatial patterning in bacteria: advances based on novel diffusible signals.

Authors:  Martina Oliver Huidobro; Jure Tica; Georg K A Wachter; Mark Isalan
Journal:  Microb Biotechnol       Date:  2021-11-29       Impact factor: 6.575

10.  High-throughput micropatterning platform reveals Nodal-dependent bisection of peri-gastrulation-associated versus preneurulation-associated fate patterning.

Authors:  Mukul Tewary; Dominika Dziedzicka; Joel Ostblom; Laura Prochazka; Nika Shakiba; Tiam Heydari; Daniel Aguilar-Hidalgo; Curtis Woodford; Elia Piccinini; David Becerra-Alonso; Alice Vickers; Blaise Louis; Nafees Rahman; Davide Danovi; Mieke Geens; Fiona M Watt; Peter W Zandstra
Journal:  PLoS Biol       Date:  2019-10-21       Impact factor: 8.029

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