Literature DB >> 28348223

Quantification of circulating Mycobacterium tuberculosis antigen peptides allows rapid diagnosis of active disease and treatment monitoring.

Chang Liu1,2,3, Zhen Zhao4, Jia Fan1,3, Christopher J Lyon1,3, Hung-Jen Wu1,5, Dobrin Nedelkov6, Adrian M Zelazny4, Kenneth N Olivier7, Lisa H Cazares8, Steven M Holland9, Edward A Graviss10, Ye Hu11,2,3.   

Abstract

Tuberculosis (TB) is a major global health threat, resulting in an urgent unmet need for a rapid, non-sputum-based quantitative test to detect active Mycobacterium tuberculosis (Mtb) infections in clinically diverse populations and quickly assess Mtb treatment responses for emerging drug-resistant strains. We have identified Mtb-specific peptide fragments and developed a method to rapidly quantify their serum concentrations, using antibody-labeled and energy-focusing porous discoidal silicon nanoparticles (nanodisks) and high-throughput mass spectrometry (MS) to enhance sensitivity and specificity. NanoDisk-MS diagnosed active Mtb cases with high sensitivity and specificity in a case-control study with cohorts reflecting the complexity of clinical practice. Similar robust sensitivities were obtained for cases of culture-positive pulmonary TB (PTB; 91.3%) and extrapulmonary TB (EPTB; 92.3%), and the sensitivities obtained for culture-negative PTB (82.4%) and EPTB (75.0%) in HIV-positive patients significantly outperformed those reported for other available assays. NanoDisk-MS also exhibited high specificity (87.1-100%) in both healthy and high-risk groups. Absolute quantification of serum Mtb antigen concentration was informative in assessing responses to antimycobacterial treatment. Thus, a NanoDisk-MS assay approach could significantly improve the diagnosis and management of active TB cases, and perhaps other infectious diseases as well.

Entities:  

Keywords:  blood test; nanodisk; rapid diagnosis; treatment monitoring; tuberculosis

Mesh:

Substances:

Year:  2017        PMID: 28348223      PMCID: PMC5393254          DOI: 10.1073/pnas.1621360114

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  40 in total

1.  Evaluation of the GeneXpert MTB/RIF assay for rapid diagnosis of tuberculosis and detection of rifampin resistance in pulmonary and extrapulmonary specimens.

Authors:  Arzu N Zeka; Sezai Tasbakan; Cengiz Cavusoglu
Journal:  J Clin Microbiol       Date:  2011-09-28       Impact factor: 5.948

2.  Microwave-assisted protein preparation and enzymatic digestion in proteomics.

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Journal:  Mol Cell Proteomics       Date:  2005-12-09       Impact factor: 5.911

3.  Promise versus reality: optimism bias in package inserts for tuberculosis diagnostics.

Authors:  Claudia M Denkinger; Jasmine Grenier; Jessica Minion; Madhukar Pai
Journal:  J Clin Microbiol       Date:  2012-05-09       Impact factor: 5.948

4.  Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis.

Authors:  Timothy E Sweeney; Lindsay Braviak; Cristina M Tato; Purvesh Khatri
Journal:  Lancet Respir Med       Date:  2016-02-20       Impact factor: 30.700

5.  Evaluation of the Xpert MTB/RIF assay for the diagnosis of pulmonary tuberculosis in a high HIV prevalence setting.

Authors:  Grant Theron; Jonny Peter; Richard van Zyl-Smit; Hridesh Mishra; Elizabeth Streicher; Samuel Murray; Rodney Dawson; Andrew Whitelaw; Michael Hoelscher; Surendra Sharma; Madhukar Pai; Robin Warren; Keertan Dheda
Journal:  Am J Respir Crit Care Med       Date:  2011-04-14       Impact factor: 21.405

6.  Assessment of the sensitivity and specificity of Xpert MTB/RIF assay as an early sputum biomarker of response to tuberculosis treatment.

Authors:  Sven O Friedrich; Andrea Rachow; Elmar Saathoff; Kasha Singh; Chacha D Mangu; Rodney Dawson; Patrick Pj Phillips; Amour Venter; Anna Bateson; Catharina C Boehme; Norbert Heinrich; Robert D Hunt; Martin J Boeree; Alimuddin Zumla; Timothy D McHugh; Stephen H Gillespie; Andreas H Diacon; Michael Hoelscher
Journal:  Lancet Respir Med       Date:  2013-07-01       Impact factor: 30.700

Review 7.  Pediatric tuberculosis: global overview and challenges.

Authors:  Soumya Swaminathan; Banu Rekha
Journal:  Clin Infect Dis       Date:  2010-05-15       Impact factor: 9.079

8.  Assessment of the novel T-cell activation marker-tuberculosis assay for diagnosis of active tuberculosis in children: a prospective proof-of-concept study.

Authors:  Damien Portevin; Felicien Moukambi; Petra Clowes; Asli Bauer; Mkunde Chachage; Nyanda E Ntinginya; Elirehema Mfinanga; Khadija Said; Frederick Haraka; Andrea Rachow; Elmar Saathoff; Maximilian Mpina; Levan Jugheli; Fred Lwilla; Ben J Marais; Michael Hoelscher; Claudia Daubenberger; Klaus Reither; Christof Geldmacher
Journal:  Lancet Infect Dis       Date:  2014-08-31       Impact factor: 25.071

Review 9.  Sputum monitoring during tuberculosis treatment for predicting outcome: systematic review and meta-analysis.

Authors:  David J Horne; Sarah E Royce; Lisa Gooze; Masahiro Narita; Philip C Hopewell; Payam Nahid; Karen R Steingart
Journal:  Lancet Infect Dis       Date:  2010-06       Impact factor: 25.071

10.  Identification of serum microRNA biomarkers for tuberculosis using RNA-seq.

Authors:  Hongtai Zhang; Zhaogang Sun; Wenjing Wei; Zhonghui Liu; Joy Fleming; Shuai Zhang; Nan Lin; Ming Wang; Maoshan Chen; Yuhui Xu; Jie Zhou; Chuanyou Li; Lijun Bi; Guangming Zhou
Journal:  PLoS One       Date:  2014-02-20       Impact factor: 3.240

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  26 in total

Review 1.  The Many Hosts of Mycobacteria 8 (MHM8): A conference report.

Authors:  Michelle H Larsen; Karen Lacourciere; Tina M Parker; Alison Kraigsley; Jacqueline M Achkar; Linda B Adams; Kathryn M Dupnik; Luanne Hall-Stoodley; Travis Hartman; Carly Kanipe; Sherry L Kurtz; Michele A Miller; Liliana C M Salvador; John S Spencer; Richard T Robinson
Journal:  Tuberculosis (Edinb)       Date:  2020-02-11       Impact factor: 3.131

Review 2.  Incipient and Subclinical Tuberculosis: a Clinical Review of Early Stages and Progression of Infection.

Authors:  Paul K Drain; Kristina L Bajema; David Dowdy; Keertan Dheda; Kogieleum Naidoo; Samuel G Schumacher; Shuyi Ma; Erin Meermeier; David M Lewinsohn; David R Sherman
Journal:  Clin Microbiol Rev       Date:  2018-07-18       Impact factor: 26.132

3.  Screening for tuberculosis: time to move beyond symptoms.

Authors:  Christina Yoon; David W Dowdy; Hanif Esmail; Peter MacPherson; Samuel G Schumacher
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Review 4.  Strategies for advanced personalized tuberculosis diagnosis: Current technologies and clinical approaches.

Authors:  Xuerong Chen; Tony Y Hu
Journal:  Precis Clin Med       Date:  2021-01-18

5.  Affinity enrichment for mass spectrometry: improving the yield of low abundance biomarkers.

Authors:  Brianna Kim; Robyn Araujo; Marissa Howard; Ruben Magni; Lance A Liotta; Alessandra Luchini
Journal:  Expert Rev Proteomics       Date:  2018-03-22       Impact factor: 3.940

6.  Clinical Evaluation of a Blood Assay to Diagnose Paucibacillary Tuberculosis via Bacterial Antigens.

Authors:  Chang Liu; Christopher J Lyon; Yang Bu; Zaian Deng; Elisabetta Walters; Yan Li; Liqun Zhang; Anneke C Hesseling; Edward A Graviss; Ye Hu
Journal:  Clin Chem       Date:  2018-01-18       Impact factor: 8.327

7.  Rapid diagnosis of new and relapse tuberculosis by quantification of a circulating antigen in HIV-infected adults in the Greater Houston metropolitan area.

Authors:  Jia Fan; Hedong Zhang; Duc T Nguyen; Christopher J Lyon; Charles D Mitchell; Zhen Zhao; Edward A Graviss; Ye Hu
Journal:  BMC Med       Date:  2017-11-01       Impact factor: 8.775

8.  Fast protein analysis enabled by high-temperature hydrolysis.

Authors:  Yuchen Wang; Wenpeng Zhang; Zheng Ouyang
Journal:  Chem Sci       Date:  2020-09-10       Impact factor: 9.825

9.  A photocleavable peptide-tagged mass probe for chemical mapping of epidermal growth factor receptor 2 (HER2) in human cancer cells.

Authors:  Liang Liu; Yuqiong Kuang; Zhongcheng Wang; Yun Chen
Journal:  Chem Sci       Date:  2020-09-30       Impact factor: 9.825

10.  Toward Comprehensive Plasma Proteomics by Orthogonal Protease Digestion.

Authors:  Andrea Fossati; Alicia L Richards; Kuei-Ho Chen; Devan Jaganath; Adithya Cattamanchi; Joel D Ernst; Danielle L Swaney
Journal:  J Proteome Res       Date:  2021-07-28       Impact factor: 5.370

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