| Literature DB >> 28347326 |
Oscar Alexander Aguirre-Obando1, Ademir Jesus Martins2,3, Mário Antônio Navarro-Silva1.
Abstract
BACKGROUND: Knockdown resistance (kdr), caused by alterations in the voltage-gated sodium channel (NaV), is one of the mechanisms responsible for pyrethroid (PY) resistance. In the Asian tiger mosquito, Aedes albopictus, at least four different mutations were described in the IIIS6 NaV segment in populations from Asia, North America and Europe. In contrast, in Aedes aegypti at least 12 non-synonymous mutations have been reported at nine different codons, mostly in the IIS6 and IIIS6 NaV segments. The Phe1534Cys kdr mutation in the IIIS6 NaV segment is the most prevalent in populations of Ae. aegypti worldwide, also found in Ae. albopictus from Singapore. Herein, we investigated the DNA diversity corresponding to the IIS6 and IIIS6 NaV segments in natural populations of Ae. albopictus from Brazil.Entities:
Keywords: Allele-specific PCR; Chikungunya; Dengue; Pyrethroid resistance; Vector control; Voltage-gated sodium channel; Zika
Mesh:
Substances:
Year: 2017 PMID: 28347326 PMCID: PMC5369189 DOI: 10.1186/s13071-017-2089-5
Source DB: PubMed Journal: Parasit Vectors ISSN: 1756-3305 Impact factor: 4.047
Fig. 1Allelic frequencies for the 1534 NaV kdr site of Aedes albopictus from Brazil. Cities/States of collection and the year of sampling (in parentheses) are placed in the map. Paraná state is detached, showing its multiple cities of collection
Demographic data and numbers of Aedes aegypti and Aedes albopictus in the localities studied
| Municipality | Demographic informationa | Samplingb | |||||
|---|---|---|---|---|---|---|---|
| Inhabitants | Residents in rural area (%) | Area (km2) | Inhabitants/km2 | Year of sampling |
|
| |
| Porto Velho (RO) | 428,527 | 8.8 | 34,090.9 | 12.6 | 2010 | 9,203 | 162 (1.7%)c |
| Rondonópolis (MT) | 195,476 | 3.8 | 4,159.1 | 47.0 | 2012 | 1,383 | 23 (1.6%) |
| Nova Londrina (PR) | 13,067 | 8.1 | 269.4 | 48.5 | 2014 | 236 | 21 (8.2%) |
| Alvorada do Sul (PR) | 10,283 | 28.6 | 424.3 | 24.2 | 2014 | 219 | 17 (7.2%) |
| Cianorte (PR) | 69,958 | 11.0 | 811.7 | 86.2 | 2009 | 1,181 | 262 (18.2%) |
| Marilena (PR) | 6,858 | 27.3 | 232.4 | 29.5 | 2014 | 143 | 16 (10.1%) |
| Foz do Iguaçú (PR) | 256,088 | 0.8 | 618.4 | 414.1 | 2009 | 5,544 | 73 (1.3%) |
| Maringá (PR) | 357,077 | 1.8 | 487.1 | 733.1 | 2012 | 13,436 | 393 (2.8%) |
Abbreviations: MT Mato Grosso State, RO Rondonia State, PR Paraná State
aSource: IBGE Cidades, 2010 sense (http://www.cidades.ibge.gov.br/)
bAdult mosquitoes reared in laboratory conditions resulting from the eggs collected in the field
c % of Ae. albopictus among total Aedes mosquitoes
Distribution and frequency of the IIS6 and IIIS6 NaV haplotypes of Aedes albopictus from Brazil. The frequencies considered the total amount of clones from the respective IIS6 or IIIS6 segments
| Haplotype | Haplotype frequency (%) | Total | ||
|---|---|---|---|---|
| Paraná | Mato Grosso | Rôndonia | ||
| IIS6 H1 | 36.7 | 5.3 | 10.6 | 52.6 |
| IIS6 H2 | 34.2 | 4.0 | 9.2 | 47.4 |
| IIIS6 1534Phe | 41.7 | 12.5 | 21.9 | 76.1 |
| IIIS6 1534Cys | 20.8 | 0.0 | 3.1 | 23.9 |
Fig. 2Nucleotide diversity in the IIS6 NaV segment of Aedes albopictus. ClustalW alignment for comparing the haplotypes found in this study, IIS6_Hap1 (KX281169) and IIS6_Hap2 (KX281170), with other sequences of Ae. albopictus available in GenBank from Brazil (FJ479615), Malaysia (KC152045) and Japan (AB827810). One haplotype of Ae. aegypti (FJ479611) was included for comparison, but the intron was neglected in order not to disturb the alignment. The sequence AB827810 does not cover the whole extension of this alignment. The translated amino acid sequence is represented by the letters in blue, over the first nucleotide of their corresponding codon. Nucleotides in uppercase letters correspond to the coding region (exons 20 and 21), and those in lower case refer to the intron with the numbering in the alignment inside brackets at the top of each block and underlined sequences referring to the primers positions. Invariable sites are indicated with dots, otherwise with the alternative nucleotide and gaps with (-). Squares indicate the codons where the 989, 1011 and 1016 kdr mutation sites are present in Ae. aegypti
Fig. 3Nucleotide diversity in the IIIS6 NaV segment of Aedes albopictus. ClustalW alignment for comparing the haplotypes found in this study, 1534Phe (KX371864) and 1534Cys (KX371865), with other Ae. albopictus sequences available in GenBank: genomic DNA (AB827824), mRNA (KC152046 and AY663382) and one haplotype of Ae. aegypti (KF527415). The three sequences downloaded from GenBank do not cover the whole extension of this alignment. The translated amino acid sequence is represented by the letters in blue, over the first nucleotide of their corresponding codon. Nucleotides in uppercase letters correspond to the coding region (exons 30 and 31) and those in lower case refer to the intron, with the numbering in the alignment inside brackets at the top of each block and single underlined sequences referring to the primers positions. Double underlines indicate the annealing region for the AS-PCR primers. Invariable sites are indicated with dots, otherwise with the alternative nucleotide and gaps with (-). The 1534 kdr site is indicated with a square
Genotype frequency of the 1534 NaV site of eight Aedes albopictus population from Brazil
| Location | Year |
| Genotype frequency | HWEa | |||
|---|---|---|---|---|---|---|---|
| Phe/Phe | Phe/Cys | Cys/Cys |
|
| |||
| Porto Velho (RO) | 2010 | 37 | 0.95 | 0.05 | 0 | 0.002 | 0.821 |
| Rondonópolis (MT) | 2012 | 11 | 1 | 0 | 0 | – | – |
| Cianorte (PR) | 2009 | 16 | 1 | 0 | 0 | – | – |
| Foz do Iguaçu (PR) | 2009 | 24 | 0.79 | 0.21 | 0 | 0.324 | 0.875 |
| Maringá (PR) | 2012 | 24 | 0.87 | 0.13 | 0 | 0.107 | 0.753 |
| Marilena (PR) | 2014 | 16 | 0.94 | 0.06 | 0 | 0.017 | 0.874 |
| Nova Londrina (PR) | 2014 | 21 | 1 | 0 | 0 | – | – |
| Alvorada do Sul (PR) | 2014 | 17 | 1 | 0 | 0 | – | – |
| PR | 2009–2014 | 118 | 0.92 | 0.08 | 0 | 0.185 | 0.768 |
Abbreviations: MT Mato Grosso State, PR Paraná State, RO Rondonia State
aHardy-Weinberg Equilibrium: Chi-square test with 1 degree of freedom