Literature DB >> 28347234

Clinical value of miR-145-5p in NSCLC and potential molecular mechanism exploration: A retrospective study based on GEO, qRT-PCR, and TCGA data.

Ting-Qing Gan1, Zu-Cheng Xie2, Rui-Xue Tang2, Tong-Tong Zhang2, Dong-Yao Li3, Zu-Yun Li2, Gang Chen2.   

Abstract

MicroRNAs have been reported to be involved in various biological processes. Here, we performed a systematic analysis to explore the clinical value and potential molecular mechanism of miR-145-5p in non-small cell lung cancer. First, a meta-analysis was performed with eligible literature, followed by microRNA microarrays in the Gene Expression Omnibus database, to verify the diagnostic and prognostic values of miR-145-5p. A cohort of 125 clinical paired non-small cell lung cancer samples was next used to detect the level of miR-145-5p and to explore the relationship of miR-145-5p with clinicopathological parameters. The Cancer Genome Atlas database was additionally applied to investigate the role of miR-145-5p in non-small cell lung cancer. The potential targets of miR-145-5p were predicted using 12 online prediction databases to explore the prospective molecular mechanism of miR-145-5p in non-small cell lung cancer. The expression of miR-145-5p in non-small cell lung cancer was significantly lower than that in healthy tissues. And miR-145-5p tended to show better diagnostic performance in lung squamous cell carcinoma than in lung adenocarcinoma. Furthermore, the expression of miR-145-5p was closely associated with lymph node metastasis in non-small cell lung cancer. Gene ontology enrichment and Kyoto Encyclopedia of Genes and Genomes pathway analysis revealed that the target genes were mainly enriched with enzyme-linked receptor protein signaling pathways, SH3 domain binding, cell leading edge, and adherens junction. The protein-protein interaction network showed that eight hub genes (SMAD4, SMAD2, IRS1, FOXO1, ERBB4, NRAS, ACTB, and ACTG1) might be the key target genes of miR-145-5p in non-small cell lung cancer. The information we obtained might offer new perspectives for clinical diagnosis and treatment for non-small cell lung cancer.

Entities:  

Keywords:  Gene Expression Omnibus database; MiR-145-5p; The Cancer Genome Atlas; bioinformatics; non-small cell lung cancer; target gene

Mesh:

Substances:

Year:  2017        PMID: 28347234     DOI: 10.1177/1010428317691683

Source DB:  PubMed          Journal:  Tumour Biol        ISSN: 1010-4283


  6 in total

1.  Diagnostic and prognostic significance of serum miR-145-5p expression in glioblastoma.

Authors:  Yao Zhang; Wei-Wei Ta; Peng-Fei Sun; Yi-Fan Meng; Cheng-Zong Zhao
Journal:  Int J Clin Exp Pathol       Date:  2019-07-01

2.  miR-145-5p Suppresses Tumor Cell Migration, Invasion and Epithelial to Mesenchymal Transition by Regulating the Sp1/NF-κB Signaling Pathway in Esophageal Squamous Cell Carcinoma.

Authors:  Li-Li Mei; Wen-Jun Wang; Yun-Tan Qiu; Xiu-Feng Xie; Jie Bai; Zhi-Zhou Shi
Journal:  Int J Mol Sci       Date:  2017-08-23       Impact factor: 5.923

3.  A curated target gene pool assisting disease prediction and patient-specific biomarker selection for lung squamous cell carcinoma.

Authors:  Bin Huang; Ning Zhong; Hongbao Cao; Guiping Yu
Journal:  Oncol Lett       Date:  2018-07-31       Impact factor: 2.967

4.  Identification of the potential therapeutic target gene UBE2C in human hepatocellular carcinoma: An investigation based on GEO and TCGA databases.

Authors:  Zilun Wei; Yihai Liu; Shuaihua Qiao; Xueling Li; Qiaoling Li; Jinxuan Zhao; Jiaxin Hu; Zhonghai Wei; Anqi Shan; Xuan Sun; Biao Xu
Journal:  Oncol Lett       Date:  2019-04-09       Impact factor: 2.967

5.  The roles and mechanisms of the circular RNA circ_104640 in early-stage lung adenocarcinoma: a potential diagnostic and therapeutic target.

Authors:  Wei Jiang; Chengpeng Zhang; Yunteng Kang; Guangbin Li; Yu Feng; Haitao Ma
Journal:  Ann Transl Med       Date:  2021-01

Review 6.  MicroRNAs associated with therapy of non-small cell lung cancer.

Authors:  Junmi Lu; Yuting Zhan; Juan Feng; Jiadi Luo; Songqing Fan
Journal:  Int J Biol Sci       Date:  2018-03-10       Impact factor: 6.580

  6 in total

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