Literature DB >> 28346789

Resolving Ultrafast Photoinduced Deactivations in Water-Solvated Pyrimidine Nucleosides.

Ana Julieta Pepino1, Javier Segarra-Martí2, Artur Nenov1, Roberto Improta3, Marco Garavelli1,2.   

Abstract

For the first time, ultrafast deactivations of photoexcited water-solvated pyrimidine nucleosides are mapped employing hybrid QM(CASPT2)/MM(AMBER) optimizations that account for explicit solvation, sugar effects, and dynamically correlated potential energy surfaces. Low-energy S1/S0 ring-puckering and ring-opening conical intersections (CIs) are suggested to drive the ballistic coherent subpicosecond (<200 fs) decays observed in each pyrimidine, the energetics controlling this processes correlating with the lifetimes observed. A second bright 1π2π* state, promoting excited-state population branching and leading toward a third CI with the ground state, is proposed to be involved in the slower ultrafast decay component observed in Thd/Cyd. The transient spectroscopic signals of the competitive deactivation channels are computed for the first time. A general unified scheme for ultrafast deactivations, spanning the sub- to few-picosecond time domain, is eventually delivered, with computed data that matches the experiments and elucidates the intrinsic photoprotection mechanism in solvated pyrimidine nucleosides.

Entities:  

Year:  2017        PMID: 28346789     DOI: 10.1021/acs.jpclett.7b00316

Source DB:  PubMed          Journal:  J Phys Chem Lett        ISSN: 1948-7185            Impact factor:   6.475


  6 in total

1.  COBRAMM 2.0 - A software interface for tailoring molecular electronic structure calculations and running nanoscale (QM/MM) simulations.

Authors:  Oliver Weingart; Artur Nenov; Piero Altoè; Ivan Rivalta; Javier Segarra-Martí; Irina Dokukina; Marco Garavelli
Journal:  J Mol Model       Date:  2018-09-03       Impact factor: 1.810

2.  Manipulating azobenzene photoisomerization through strong light-molecule coupling.

Authors:  J Fregoni; G Granucci; E Coccia; M Persico; S Corni
Journal:  Nat Commun       Date:  2018-11-08       Impact factor: 14.919

3.  Tracking excited state decay mechanisms of pyrimidine nucleosides in real time.

Authors:  Rocío Borrego-Varillas; Artur Nenov; Piotr Kabaciński; Irene Conti; Lucia Ganzer; Aurelio Oriana; Vishal Kumar Jaiswal; Ines Delfino; Oliver Weingart; Cristian Manzoni; Ivan Rivalta; Marco Garavelli; Giulio Cerullo
Journal:  Nat Commun       Date:  2021-12-14       Impact factor: 14.919

4.  Molecular Identification of the Transient Species Mediating the Deactivation Dynamics of Solvated Guanosine and Deazaguanosine.

Authors:  Javier Ortín-Fernández; Jesús González-Vázquez; Lara Martínez-Fernández; Inés Corral
Journal:  Molecules       Date:  2022-02-01       Impact factor: 4.411

5.  On the Photostability of Cyanuric Acid and Its Candidature as a Prebiotic Nucleobase.

Authors:  Luis A Ortiz-Rodríguez; Sean J Hoehn; Carlos E Crespo-Hernández
Journal:  Molecules       Date:  2022-02-10       Impact factor: 4.411

6.  Modelling Photoionisation in Isocytosine: Potential Formation of Longer-Lived Excited State Cations in its Keto Form.

Authors:  Javier Segarra-Martí; Michael J Bearpark
Journal:  Chemphyschem       Date:  2021-09-07       Impact factor: 3.102

  6 in total

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