Literature DB >> 28346784

Structure Determination of Mycobacterium tuberculosis Serine Protease Hip1 (Rv2224c).

Jacqueline L Naffin-Olivos1, Andrew Daab1,2, Andre White1, Nathan E Goldfarb3, Amy C Milne1, Dali Liu4, Jacqueline Baikovitz5, Ben M Dunn6, Jyothi Rengarajan7, Gregory A Petsko8, Dagmar Ringe1.   

Abstract

The Mycobacterium tuberculosis (Mtb) serine protease Hip1 (hydrolase important for pathogenesis; Rv2224c) promotes tuberculosis (TB) pathogenesis by impairing host immune responses through proteolysis of a protein substrate, Mtb GroEL2. The cell surface localization of Hip1 and its immunomodulatory functions make Hip1 a good drug target for new adjunctive immune therapies for TB. Here, we report the crystal structure of Hip1 to a resolution of 2.6 Å and the kinetic studies of the enzyme against model substrates and the protein GroEL2. The structure shows a two-domain protein, one of which contains the catalytic residues that are the signature of a serine protease. Surprisingly, a threonine is located within the active site close enough to hydrogen bond with the catalytic residues Asp463 and His490. Mutation of this residue, Thr466, to alanine established its importance for function. Our studies provide insights into the structure of a member of a novel family of proteases. Knowledge of the Hip1 structure will aid in designing inhibitors that could block Hip1 activity.

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Year:  2017        PMID: 28346784      PMCID: PMC6033327          DOI: 10.1021/acs.biochem.6b01066

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  37 in total

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Authors:  M Holmquist
Journal:  Curr Protein Pept Sci       Date:  2000-09       Impact factor: 3.272

2.  Thermofluor-based high-throughput stability optimization of proteins for structural studies.

Authors:  Ulrika B Ericsson; B Martin Hallberg; George T Detitta; Niek Dekker; Pär Nordlund
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3.  Structural basis for conformational plasticity of the Parkinson's disease-associated ubiquitin hydrolase UCH-L1.

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Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-13       Impact factor: 11.205

4.  Crystal structure of Mycobacterium tuberculosis ClpP1P2 suggests a model for peptidase activation by AAA+ partner binding and substrate delivery.

Authors:  Karl R Schmitz; Daniel W Carney; Jason K Sello; Robert T Sauer
Journal:  Proc Natl Acad Sci U S A       Date:  2014-09-29       Impact factor: 11.205

5.  X-ray snapshots of peptide processing in mutants of tricorn-interacting factor F1 from Thermoplasma acidophilum.

Authors:  Peter Goettig; Hans Brandstetter; Michael Groll; Walter Göhring; Peter V Konarev; Dmitri I Svergun; Robert Huber; Jeong-Sun Kim
Journal:  J Biol Chem       Date:  2005-07-01       Impact factor: 5.157

6.  Prolyl aminopeptidase is not a sulfhydryl enzyme: identification of the active serine residue by site-directed mutagenesis.

Authors:  A Kitazono; K Ito; T Yoshimoto
Journal:  J Biochem       Date:  1994-11       Impact factor: 3.387

7.  Structure of the mycosin-1 protease from the mycobacterial ESX-1 protein type VII secretion system.

Authors:  Matthew Solomonson; Pitter F Huesgen; Gregory A Wasney; Nobuhiko Watanabe; Robert J Gruninger; Gerd Prehna; Christopher M Overall; Natalie C J Strynadka
Journal:  J Biol Chem       Date:  2013-04-25       Impact factor: 5.157

8.  On the size of the active site in proteases. I. Papain.

Authors:  I Schechter; A Berger
Journal:  Biochem Biophys Res Commun       Date:  1967-04-20       Impact factor: 3.575

Review 9.  Lipoproteins of Mycobacterium tuberculosis: an abundant and functionally diverse class of cell envelope components.

Authors:  Iain C Sutcliffe; Dean J Harrington
Journal:  FEMS Microbiol Rev       Date:  2004-11       Impact factor: 16.408

10.  Design of Selective Substrates and Activity-Based Probes for Hydrolase Important for Pathogenesis 1 (HIP1) from Mycobacterium tuberculosis.

Authors:  Christian S Lentz; Alvaro A Ordonez; Paulina Kasperkiewicz; Florencia La Greca; Anthony J O'Donoghue; Christopher J Schulze; James C Powers; Charles S Craik; Marcin Drag; Sanjay K Jain; Matthew Bogyo
Journal:  ACS Infect Dis       Date:  2016-07-15       Impact factor: 5.084

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  3 in total

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Journal:  Front Cell Infect Microbiol       Date:  2018-12-03       Impact factor: 5.293

2.  N-Pyrazinoyl Substituted Amino Acids as Potential Antimycobacterial Agents-The Synthesis and Biological Evaluation of Enantiomers.

Authors:  Martin Juhás; Lucie Kučerová; Ondřej Horáček; Ondřej Janďourek; Vladimír Kubíček; Klára Konečná; Radim Kučera; Pavel Bárta; Jiří Janoušek; Pavla Paterová; Jiří Kuneš; Martin Doležal; Jan Zitko
Journal:  Molecules       Date:  2020-03-27       Impact factor: 4.411

3.  The acid-base-nucleophile catalytic triad in ABH-fold enzymes is coordinated by a set of structural elements.

Authors:  Alexander Denesyuk; Polytimi S Dimitriou; Mark S Johnson; Toru Nakayama; Konstantin Denessiouk
Journal:  PLoS One       Date:  2020-02-21       Impact factor: 3.240

  3 in total

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