Literature DB >> 28346407

Insights into activity and inhibition from the crystal structure of human O-GlcNAcase.

Nathaniel L Elsen1, Sangita B Patel2, Rachael E Ford1, Dawn L Hall1, Fred Hess3, Hari Kandula1, Maria Kornienko1, John Reid2, Harold Selnick4, Jennifer M Shipman1, Sujata Sharma1, Kevin J Lumb1, Stephen M Soisson2, Daniel J Klein2.   

Abstract

O-GlcNAc hydrolase (OGA) catalyzes removal of βα-linked N-acetyl-D-glucosamine from serine and threonine residues. We report crystal structures of Homo sapiens OGA catalytic domain in apo and inhibited states, revealing a flexible dimer that displays three unique conformations and is characterized by subdomain α-helix swapping. These results identify new structural features of the substrate-binding groove adjacent to the catalytic site and open new opportunities for structural, mechanistic and drug discovery activities.

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Year:  2017        PMID: 28346407     DOI: 10.1038/nchembio.2357

Source DB:  PubMed          Journal:  Nat Chem Biol        ISSN: 1552-4450            Impact factor:   15.040


  32 in total

1.  Direct phase determination by entropy maximization and likelihood ranking: status report and perspectives.

Authors:  G Bricogne
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  1993-01-01

Review 2.  The roles of O-linked β-N-acetylglucosamine in cardiovascular physiology and disease.

Authors:  Natasha E Zachara
Journal:  Am J Physiol Heart Circ Physiol       Date:  2012-01-27       Impact factor: 4.733

3.  O-GlcNAcase is essential for embryonic development and maintenance of genomic stability.

Authors:  Yong Ryoul Yang; Minseok Song; Ho Lee; Yoon Jeon; Eun-Jeong Choi; Hyun-Jun Jang; Hyo Youl Moon; Ha-Young Byun; Eung-Kyun Kim; Dae Hyun Kim; Mi Nam Lee; Ara Koh; Jaewang Ghim; Jang Hyun Choi; Whaseon Lee-Kwon; Kyong Tai Kim; Sung Ho Ryu; Pann-Ghill Suh
Journal:  Aging Cell       Date:  2012-02-28       Impact factor: 9.304

4.  Enzymatic characterization and inhibition of the nuclear variant of human O-GlcNAcase.

Authors:  Matthew S Macauley; David J Vocadlo
Journal:  Carbohydr Res       Date:  2009-04-20       Impact factor: 2.104

5.  The O-GlcNAc transferase gene resides on the X chromosome and is essential for embryonic stem cell viability and mouse ontogeny.

Authors:  R Shafi; S P Iyer; L G Ellies; N O'Donnell; K W Marek; D Chui; G W Hart; J D Marth
Journal:  Proc Natl Acad Sci U S A       Date:  2000-05-23       Impact factor: 11.205

6.  A lipid-droplet-targeted O-GlcNAcase isoform is a key regulator of the proteasome.

Authors:  Chithra N Keembiyehetty; Anna Krzeslak; Dona C Love; John A Hanover
Journal:  J Cell Sci       Date:  2011-08-15       Impact factor: 5.285

7.  Dynamic O-glycosylation of nuclear and cytosolic proteins: further characterization of the nucleocytoplasmic beta-N-acetylglucosaminidase, O-GlcNAcase.

Authors:  Lance Wells; Yuan Gao; James A Mahoney; Keith Vosseller; Chen Chen; Antony Rosen; Gerald W Hart
Journal:  J Biol Chem       Date:  2002-01-18       Impact factor: 5.157

8.  Dynamic O-glycosylation of nuclear and cytosolic proteins: cloning and characterization of a neutral, cytosolic beta-N-acetylglucosaminidase from human brain.

Authors:  Y Gao; L Wells; F I Comer; G J Parker; G W Hart
Journal:  J Biol Chem       Date:  2001-01-08       Impact factor: 5.157

9.  Features and development of Coot.

Authors:  P Emsley; B Lohkamp; W G Scott; K Cowtan
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-03-24

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  23 in total

1.  Evaluation of a PET Radioligand to Image O-GlcNAcase in Brain and Periphery of Rhesus Monkey and Knock-Out Mouse.

Authors:  Soumen Paul; Mohammad B Haskali; Jeih-San Liow; Sami S Zoghbi; Vanessa N Barth; Marcy Comly Kolodrubetz; Michelle R Bond; Cheryl L Morse; Robert L Gladding; Michael P Frankland; Nancy Kant; Lawrence Slieker; Sergey Shcherbinin; Hugh N Nuthall; Paolo Zanotti-Fregonara; John A Hanover; Cynthia Jesudason; Victor W Pike; Robert B Innis
Journal:  J Nucl Med       Date:  2018-09-13       Impact factor: 10.057

Review 2.  Chemical and Biochemical Strategies To Explore the Substrate Recognition of O-GlcNAc-Cycling Enzymes.

Authors:  Chia-Wei Hu; Matthew Worth; Hao Li; Jiaoyang Jiang
Journal:  Chembiochem       Date:  2018-11-12       Impact factor: 3.164

3.  Carb cutting works better with a partner.

Authors:  Jennifer J Kohler
Journal:  Nat Struct Mol Biol       Date:  2017-05-04       Impact factor: 15.369

Review 4.  Critical observations that shaped our understanding of the function(s) of intracellular glycosylation (O-GlcNAc).

Authors:  Natasha E Zachara
Journal:  FEBS Lett       Date:  2018-11-24       Impact factor: 4.124

Review 5.  Nutrient-driven O-GlcNAc in proteostasis and neurodegeneration.

Authors:  Ilhan Akan; Stephanie Olivier-Van Stichelen; Michelle R Bond; John A Hanover
Journal:  J Neurochem       Date:  2017-11-20       Impact factor: 5.372

Review 6.  Structural characterization of the O-GlcNAc cycling enzymes: insights into substrate recognition and catalytic mechanisms.

Authors:  Cassandra M Joiner; Hao Li; Jiaoyang Jiang; Suzanne Walker
Journal:  Curr Opin Struct Biol       Date:  2019-01-30       Impact factor: 6.809

7.  The O-GlcNAc Modification on Kinases.

Authors:  Paul A Schwein; Christina M Woo
Journal:  ACS Chem Biol       Date:  2020-03-10       Impact factor: 5.100

Review 8.  Molecular Interrogation to Crack the Case of O-GlcNAc.

Authors:  Arielis Estevez; Dongsheng Zhu; Connor Blankenship; Jiaoyang Jiang
Journal:  Chemistry       Date:  2020-07-20       Impact factor: 5.236

9.  O-GlcNAcase Fragment Discovery with Fluorescence Polarimetry.

Authors:  Vladimir S Borodkin; Karim Rafie; Nithya Selvan; Tonia Aristotelous; Iva Navratilova; Andrew T Ferenbach; Daan M F van Aalten
Journal:  ACS Chem Biol       Date:  2018-05-02       Impact factor: 5.100

Review 10.  O-GlcNAcylation: the "stress and nutrition receptor" in cell stress response.

Authors:  Rui-Zhi Yao; Yang Liu; Shuai Lian; Peng Liu; Ya-Jie Hu; Hong-Zhao Shi; Hong-Ming Lv; Yu-Ying Yang; Bin Xu; Shi-Ze Li
Journal:  Cell Stress Chaperones       Date:  2020-11-07       Impact factor: 3.667

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