Literature DB >> 28344374

Visibility Equalizer Cutaway Visualization of Mesoscopic Biological Models.

M Le Muzic1, P Mindek1, J Sorger2, L Autin3, D Goodsell3, I Viola1.   

Abstract

In scientific illustrations and visualization, cutaway views are often employed as an effective technique for occlusion management in densely packed scenes. We propose a novel method for authoring cutaway illustrations of mesoscopic biological models. In contrast to the existing cutaway algorithms, we take advantage of the specific nature of the biological models. These models consist of thousands of instances with a comparably smaller number of different types. Our method constitutes a two stage process. In the first step, clipping objects are placed in the scene, creating a cutaway visualization of the model. During this process, a hierarchical list of stacked bars inform the user about the instance visibility distribution of each individual molecular type in the scene. In the second step, the visibility of each molecular type is fine-tuned through these bars, which at this point act as interactive visibility equalizers. An evaluation of our technique with domain experts confirmed that our equalizer-based approach for visibility specification was valuable and effective for both, scientific and educational purposes.

Entities:  

Year:  2016        PMID: 28344374      PMCID: PMC5364803          DOI: 10.1111/cgf.12892

Source DB:  PubMed          Journal:  Comput Graph Forum        ISSN: 0167-7055            Impact factor:   2.078


  6 in total

1.  Automatic transfer functions based on informational divergence.

Authors:  Marc Ruiz; Anton Bardera; Imma Boada; Ivan Viola; Miquel Feixas; Mateu Sbert
Journal:  IEEE Trans Vis Comput Graph       Date:  2011-12       Impact factor: 4.579

2.  Visibility histograms and visibility-driven transfer functions.

Authors:  Carlos D Correa; Kwan-Liu Ma
Journal:  IEEE Trans Vis Comput Graph       Date:  2011-02       Impact factor: 4.579

3.  Importance-driven feature enhancement in volume visualization.

Authors:  Ivan Viola; Armin Kanitsar; M Eduard Gröller
Journal:  IEEE Trans Vis Comput Graph       Date:  2005 Jul-Aug       Impact factor: 4.579

4.  ClearView: An interactive context preserving hotspot visualization technique.

Authors:  Jens Kriger; Jens Schneider; Rüdiger Westermann
Journal:  IEEE Trans Vis Comput Graph       Date:  2006 Sep-Oct       Impact factor: 4.579

5.  Occlusion-free Blood Flow Animation with Wall Thickness Visualization.

Authors:  Kai Lawonn; Sylvia Glaßer; Anna Vilanova; Bernhard Preim; Tobias Isenberg
Journal:  IEEE Trans Vis Comput Graph       Date:  2016-01       Impact factor: 4.579

6.  cellPACK: a virtual mesoscope to model and visualize structural systems biology.

Authors:  Graham T Johnson; Ludovic Autin; Mostafa Al-Alusi; David S Goodsell; Michel F Sanner; Arthur J Olson
Journal:  Nat Methods       Date:  2014-12-01       Impact factor: 28.547

  6 in total
  2 in total

Review 1.  From Atoms to Cells: Using Mesoscale Landscapes to Construct Visual Narratives.

Authors:  David S Goodsell; Margaret A Franzen; Tim Herman
Journal:  J Mol Biol       Date:  2018-06-07       Impact factor: 5.469

Review 2.  Perspectives on Structural Molecular Biology Visualization: From Past to Present.

Authors:  Arthur J Olson
Journal:  J Mol Biol       Date:  2018-07-23       Impact factor: 5.469

  2 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.