Literature DB >> 28341148

Lipidomics: Prospects from a technological perspective.

Alexander Triebl1, Jürgen Hartler2, Martin Trötzmüller1, Harald C Köfeler3.   

Abstract

Over the last two decades, lipidomics has evolved into an 'omics' technology pari passu with benchmarking 'omics' technologies, such as genomics or proteomics. The driving force behind this development was a constant advance in mass spectrometry and related technologies. The aim of this opinion article is to give the interested reader a concise but still comprehensive overview about the technological state of the art in lipidomics, current challenges and perspectives for future development. As such, this article guides through the whole workflow of lipidomics, from sampling to data analysis. This article is part of a Special Issue entitled: BBALIP_Lipidomics Opinion Articles edited by Sepp Kohlwein.
Copyright © 2017 Elsevier B.V. All rights reserved.

Entities:  

Keywords:  Biomarker discovery; Chromatography; Data processing; Lipid extraction; Lipidomics; Mass spectrometry

Mesh:

Substances:

Year:  2017        PMID: 28341148      PMCID: PMC6013030          DOI: 10.1016/j.bbalip.2017.03.004

Source DB:  PubMed          Journal:  Biochim Biophys Acta Mol Cell Biol Lipids        ISSN: 1388-1981            Impact factor:   4.698


  77 in total

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Authors:  Xianlin Han; Richard W Gross
Journal:  Mass Spectrom Rev       Date:  2005 May-Jun       Impact factor: 10.946

2.  Rapid screening of anabolic steroids in horse urine with ultra-high-performance liquid chromatography/tandem mass spectrometry after chemical derivatisation.

Authors:  Colton H F Wong; David K K Leung; Francis P W Tang; Jenny K Y Wong; Nola H Yu; Terence S M Wan
Journal:  J Chromatogr A       Date:  2012-01-10       Impact factor: 4.759

3.  Growth retardation, impaired triacylglycerol catabolism, hepatic steatosis, and lethal skin barrier defect in mice lacking comparative gene identification-58 (CGI-58).

Authors:  Franz P W Radner; Ingo E Streith; Gabriele Schoiswohl; Martina Schweiger; Manju Kumari; Thomas O Eichmann; Gerald Rechberger; Harald C Koefeler; Sandra Eder; Silvia Schauer; H Christian Theussl; Karina Preiss-Landl; Achim Lass; Robert Zimmermann; Gerald Hoefler; Rudolf Zechner; Guenter Haemmerle
Journal:  J Biol Chem       Date:  2009-12-18       Impact factor: 5.157

4.  A procedure for fractionation of sphingolipid classes by solid-phase extraction on aminopropyl cartridges.

Authors:  J Bodennec; O Koul; I Aguado; G Brichon; G Zwingelstein; J Portoukalian
Journal:  J Lipid Res       Date:  2000-09       Impact factor: 5.922

5.  High-Throughput and Comprehensive Lipidomic Analysis Using Ultrahigh-Performance Supercritical Fluid Chromatography-Mass Spectrometry.

Authors:  Miroslav Lísa; Michal Holčapek
Journal:  Anal Chem       Date:  2015-07-02       Impact factor: 6.986

6.  Quantitative analysis of biological membrane lipids at the low picomole level by nano-electrospray ionization tandem mass spectrometry.

Authors:  B Brügger; G Erben; R Sandhoff; F T Wieland; W D Lehmann
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

7.  Global analysis of the yeast lipidome by quantitative shotgun mass spectrometry.

Authors:  Christer S Ejsing; Julio L Sampaio; Vineeth Surendranath; Eva Duchoslav; Kim Ekroos; Robin W Klemm; Kai Simons; Andrej Shevchenko
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-27       Impact factor: 11.205

8.  Algorithm for processing raw mass spectrometric data to identify and quantitate complex lipid molecular species in mixtures by data-dependent scanning and fragment ion database searching.

Authors:  Haowei Song; Fong-Fu Hsu; Jack Ladenson; John Turk
Journal:  J Am Soc Mass Spectrom       Date:  2007-07-29       Impact factor: 3.109

9.  Shorthand notation for lipid structures derived from mass spectrometry.

Authors:  Gerhard Liebisch; Juan Antonio Vizcaíno; Harald Köfeler; Martin Trötzmüller; William J Griffiths; Gerd Schmitz; Friedrich Spener; Michael J O Wakelam
Journal:  J Lipid Res       Date:  2013-04-02       Impact factor: 5.922

10.  Analysis of lipid experiments (ALEX): a software framework for analysis of high-resolution shotgun lipidomics data.

Authors:  Peter Husen; Kirill Tarasov; Maciej Katafiasz; Elena Sokol; Johannes Vogt; Jan Baumgart; Robert Nitsch; Kim Ekroos; Christer S Ejsing
Journal:  PLoS One       Date:  2013-11-07       Impact factor: 3.240

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  8 in total

1.  Membrane fluidity is regulated by the C. elegans transmembrane protein FLD-1 and its human homologs TLCD1/2.

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Journal:  Elife       Date:  2018-12-04       Impact factor: 8.140

2.  Tuberculostearic Acid-Containing Phosphatidylinositols as Markers of Bacterial Burden in Tuberculosis.

Authors:  Julius Brandenburg; Jan Heyckendorf; Franziska Marwitz; Nicole Zehethofer; Lara Linnemann; Nicolas Gisch; Hande Karaköse; Maja Reimann; Katharina Kranzer; Barbara Kalsdorf; Patricia Sanchez-Carballo; Michael Weinkauf; Verena Scholz; Sven Malm; Susanne Homolka; Karoline I Gaede; Christian Herzmann; Ulrich E Schaible; Christoph Hölscher; Norbert Reiling; Dominik Schwudke
Journal:  ACS Infect Dis       Date:  2022-06-28       Impact factor: 5.578

Review 3.  A Comprehensive Review of Lipidomics and Its Application to Assess Food Obtained from Farm Animals.

Authors:  Yinghua Song; Changyun Cai; Yingzi Song; Xue Sun; Baoxiu Liu; Peng Xue; Mingxia Zhu; Wenqiong Chai; Yonghui Wang; Changfa Wang; Mengmeng Li
Journal:  Food Sci Anim Resour       Date:  2022-01-01

4.  Phosphatidylcholine (18:0/20:4), a potential biomarker to predict ethionamide-induced hepatic steatosis in rats.

Authors:  Kyotaka Muta; Kosuke Saito; Yusuke Kemmochi; Taku Masuyama; Akio Kobayashi; Yoshiro Saito; Shoichiro Sugai
Journal:  J Appl Toxicol       Date:  2022-03-29       Impact factor: 3.628

5.  Lipidomics profiling of skin surface lipids in senile pruritus.

Authors:  Xiaolei Ma; Lulu Lu; Zheng Zhao; Mingru Cai; Na Gao; Gangwen Han
Journal:  Lipids Health Dis       Date:  2020-07-16       Impact factor: 3.876

Review 6.  Lipidomics from sample preparation to data analysis: a primer.

Authors:  Thomas Züllig; Martin Trötzmüller; Harald C Köfeler
Journal:  Anal Bioanal Chem       Date:  2019-12-10       Impact factor: 4.142

Review 7.  HIGH RESOLUTION MASS SPECTROMETRY IN LIPIDOMICS.

Authors:  Thomas Züllig; Harald C Köfeler
Journal:  Mass Spectrom Rev       Date:  2020-03-31       Impact factor: 10.946

8.  Extending the Lipidome Coverage by Combining Different Mass Spectrometric Platforms: An Innovative Strategy to Answer Chemical Food Safety Issues.

Authors:  Jérémy Marchand; Yann Guitton; Estelle Martineau; Anne-Lise Royer; David Balgoma; Bruno Le Bizec; Patrick Giraudeau; Gaud Dervilly
Journal:  Foods       Date:  2021-05-28
  8 in total

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