Literature DB >> 28339040

Detection assay for HPV16 and HPV18 by loop‑mediated isothermal amplification with lateral flow dipstick tests.

Ratchanida Kumvongpin1, Patcharee Jearanaikoon1, Chotchana Wilailuckana1, Nattaya Sae-Ung1, Prinya Prasongdee1, Sakda Daduang2, Metee Wongsena3, Patcharee Boonsiri4, Wansika Kiatpathomchai5, Sukumarn Sanersak Swangvaree6, Alisa Sandee7, Jureerut Daduang1.   

Abstract

Cervical cancer is the third highest cause of death in developing countries and most commonly results from high‑risk human papillomavirus (HR‑HPV) infection. Among HR‑HPV genotypes, HPV16 and HPV18 are the most prevalent in cervical cancers. Therefore, the present study aimed to develop a detection assay for HPV16 and HPV18 infection using loop‑mediated isothermal amplification (LAMP) with lateral flow dipstick (LFD) tests. This assay is a simplified, user‑friendly method for the visual detection of HPV genotypes. DNA was extracted from clinical tissue samples, and HPV genotyping was performed using nested polymerase chain reaction (PCR). The clinical samples were demonstrated to include 44 HPV16‑positive, 18 HPV18‑positive and 80 HPV‑negative samples. All DNA samples were also used as templates for a LAMP reaction (30 min at 65˚C), and subsequently, a fluorescein isothiocyanate‑labelled probe was hybridized with the reaction product. Finally, the LFD test was performed. The sensitivity of the LAMP‑LFD test was higher than LAMP‑turbidity, exhibiting up to 100‑fold higher sensitivity for HPV16 and 10‑fold higher sensitivity for HPV18. All HPV16 and HPV18‑positive samples generated positive results in both assays; however, 22 samples detected as HPV‑negative by LAMP‑turbidity exhibited positive results by LAMP‑LFD test (22 of 80 samples). Therefore, these samples were further examined using quantitative (q)PCR. The results demonstrated that 20 out of the 22 samples designated positive by LAMP‑LFD, but negative by LAMP turbidity, gave a positive result with qPCR, while the remaining 2 samples were negative by qPCR. The present results suggested that LAMP‑LFD provided higher sensitivity than LAMP‑turbidity and nested PCR. Thus, the LAMP‑LFD test developed in the present study might be useful for the detection of HPV16 and HPV18 in local hospitals.

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Year:  2017        PMID: 28339040     DOI: 10.3892/mmr.2017.6370

Source DB:  PubMed          Journal:  Mol Med Rep        ISSN: 1791-2997            Impact factor:   2.952


  3 in total

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Authors:  Chao Zhang; Tingting Zheng; Hua Wang; Wei Chen; Xiaoye Huang; Jianqi Liang; Liping Qiu; Da Han; Weihong Tan
Journal:  Anal Chem       Date:  2021-02-11       Impact factor: 6.986

2.  Development of loop-mediated isothermal amplification-lateral flow dipstick as a rapid screening test for detecting Listeria monocytogenes in frozen food products using a specific region on the ferrous iron transport protein B gene.

Authors:  Wimvipa Srisawat; Chalermkiat Saengthongpinit; Wirawan Nuchchanart
Journal:  Vet World       Date:  2022-03-12

3.  A label-free strategy for visual genotyping based on phosphate induced coloration reaction.

Authors:  Jiaxing Zhang; Hui Hui; Wei Xu; Kai Hua; Yali Cui; Xiaonan Liu
Journal:  RSC Adv       Date:  2022-08-10       Impact factor: 4.036

  3 in total

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