Literature DB >> 28334478

Different Structural Origins of the Enantioselectivity of Haloalkane Dehalogenases toward Linear β-Haloalkanes: Open-Solvated versus Occluded-Desolvated Active Sites.

Veronika Liskova1,2, Veronika Stepankova1,2,3, David Bednar1,2, Jan Brezovsky1,2, Zbynek Prokop1,2, Radka Chaloupkova1,2, Jiri Damborsky1,2.   

Abstract

The enzymatic enantiodiscrimination of linear β-haloalkanes is difficult because the simple structures of the substrates prevent directional interactions. Herein we describe two distinct molecular mechanisms for the enantiodiscrimination of the β-haloalkane 2-bromopentane by haloalkane dehalogenases. Highly enantioselective DbjA has an open, solvent-accessible active site, whereas the engineered enzyme DhaA31 has an occluded and less solvated cavity but shows similar enantioselectivity. The enantioselectivity of DhaA31 arises from steric hindrance imposed by two specific substitutions rather than hydration as in DbjA.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  enantioselectivity; enzyme catalysis; enzymes; molecular modeling; protein engineering

Year:  2017        PMID: 28334478     DOI: 10.1002/anie.201611193

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  2 in total

1.  A Haloalkane Dehalogenase from Saccharomonospora viridis Strain DSM 43017, a Compost Bacterium with Unusual Catalytic Residues, Unique (S)-Enantiopreference, and High Thermostability.

Authors:  Klaudia Chmelova; Eva Sebestova; Veronika Liskova; Andy Beier; David Bednar; Zbynek Prokop; Radka Chaloupkova; Jiri Damborsky
Journal:  Appl Environ Microbiol       Date:  2020-08-18       Impact factor: 4.792

2.  Structural and catalytic effects of surface loop-helix transplantation within haloalkane dehalogenase family.

Authors:  Martin Marek; Radka Chaloupkova; Tatyana Prudnikova; Yukari Sato; Pavlina Rezacova; Yuji Nagata; Ivana Kuta Smatanova; Jiri Damborsky
Journal:  Comput Struct Biotechnol J       Date:  2020-06-03       Impact factor: 7.271

  2 in total

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