Literature DB >> 28332277

Sequencing of sporadic Attention-Deficit Hyperactivity Disorder (ADHD) identifies novel and potentially pathogenic de novo variants and excludes overlap with genes associated with autism spectrum disorder.

Daniel Seung Kim1,2, Amber A Burt1, Jane E Ranchalis1, Beth Wilmot3, Joshua D Smith4, Karynne E Patterson4, Bradley P Coe4, Yatong K Li2, Michael J Bamshad1, Molly Nikolas5, Evan E Eichler4, James M Swanson6,7, Joel T Nigg8, Deborah A Nickerson4, Gail P Jarvik1,4.   

Abstract

Attention-Deficit Hyperactivity Disorder (ADHD) has high heritability; however, studies of common variation account for <5% of ADHD variance. Using data from affected participants without a family history of ADHD, we sought to identify de novo variants that could account for sporadic ADHD. Considering a total of 128 families, two analyses were conducted in parallel: first, in 11 unaffected parent/affected proband trios (or quads with the addition of an unaffected sibling) we completed exome sequencing. Six de novo missense variants at highly conserved bases were identified and validated from four of the 11 families: the brain-expressed genes TBC1D9, DAGLA, QARS, CSMD2, TRPM2, and WDR83. Separately, in 117 unrelated probands with sporadic ADHD, we sequenced a panel of 26 genes implicated in intellectual disability (ID) and autism spectrum disorder (ASD) to evaluate whether variation in ASD/ID-associated genes were also present in participants with ADHD. Only one putative deleterious variant (Gln600STOP) in CHD1L was identified; this was found in a single proband. Notably, no other nonsense, splice, frameshift, or highly conserved missense variants in the 26 gene panel were identified and validated. These data suggest that de novo variant analysis in families with independently adjudicated sporadic ADHD diagnosis can identify novel genes implicated in ADHD pathogenesis. Moreover, that only one of the 128 cases (0.8%, 11 exome, and 117 MIP sequenced participants) had putative deleterious variants within our data in 26 genes related to ID and ASD suggests significant independence in the genetic pathogenesis of ADHD as compared to ASD and ID phenotypes.
© 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

Entities:  

Keywords:  attention deficit hyperactivity disorder (ADHD); autism spectrum disorder (ASD); exome sequencing; intellectual disability (ID); molecular inversion probe (MIP) sequencing; sporadic ADHD

Mesh:

Substances:

Year:  2017        PMID: 28332277      PMCID: PMC5467442          DOI: 10.1002/ajmg.b.32527

Source DB:  PubMed          Journal:  Am J Med Genet B Neuropsychiatr Genet        ISSN: 1552-4841            Impact factor:   3.568


  44 in total

1.  The mystery of missing heritability: Genetic interactions create phantom heritability.

Authors:  Or Zuk; Eliana Hechter; Shamil R Sunyaev; Eric S Lander
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-05       Impact factor: 11.205

2.  Mutations in QARS, encoding glutaminyl-tRNA synthetase, cause progressive microcephaly, cerebral-cerebellar atrophy, and intractable seizures.

Authors:  Xiaochang Zhang; Jiqiang Ling; Giulia Barcia; Lili Jing; Jiang Wu; Brenda J Barry; Ganeshwaran H Mochida; R Sean Hill; Jill M Weimer; Quinn Stein; Annapurna Poduri; Jennifer N Partlow; Dorothée Ville; Olivier Dulac; Tim W Yu; Anh-Thu N Lam; Sarah Servattalab; Jacqueline Rodriguez; Nathalie Boddaert; Arnold Munnich; Laurence Colleaux; Leonard I Zon; Dieter Söll; Christopher A Walsh; Rima Nabbout
Journal:  Am J Hum Genet       Date:  2014-03-20       Impact factor: 11.025

3.  Cerebellar ataxia with spasmodic cough: a new form of dominant ataxia.

Authors:  Paula Coutinho; Vítor T Cruz; Assunção Tuna; Sérgio E Silva; João Guimarães
Journal:  Arch Neurol       Date:  2006-04

4.  De novo mutations revealed by whole-exome sequencing are strongly associated with autism.

Authors:  Stephan J Sanders; Michael T Murtha; Abha R Gupta; John D Murdoch; Melanie J Raubeson; A Jeremy Willsey; A Gulhan Ercan-Sencicek; Nicholas M DiLullo; Neelroop N Parikshak; Jason L Stein; Michael F Walker; Gordon T Ober; Nicole A Teran; Youeun Song; Paul El-Fishawy; Ryan C Murtha; Murim Choi; John D Overton; Robert D Bjornson; Nicholas J Carriero; Kyle A Meyer; Kaya Bilguvar; Shrikant M Mane; Nenad Sestan; Richard P Lifton; Murat Günel; Kathryn Roeder; Daniel H Geschwind; Bernie Devlin; Matthew W State
Journal:  Nature       Date:  2012-04-04       Impact factor: 49.962

5.  Attention-deficit/hyperactivity disorder polygenic risk scores predict attention problems in a population-based sample of children.

Authors:  Maria M Groen-Blokhuis; Christel M Middeldorp; Kees-Jan Kan; Abdel Abdellaoui; Catharina E M van Beijsterveldt; Erik A Ehli; Gareth E Davies; Paul A Scheet; Xiangjun Xiao; James J Hudziak; Jouke-Jan Hottenga; Ben M Neale; Dorret I Boomsma
Journal:  J Am Acad Child Adolesc Psychiatry       Date:  2014-08-19       Impact factor: 8.829

6.  Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders.

Authors:  Brian J O'Roak; Laura Vives; Wenqing Fu; Jarrett D Egertson; Ian B Stanaway; Ian G Phelps; Gemma Carvill; Akash Kumar; Choli Lee; Katy Ankenman; Jeff Munson; Joseph B Hiatt; Emily H Turner; Roie Levy; Diana R O'Day; Niklas Krumm; Bradley P Coe; Beth K Martin; Elhanan Borenstein; Deborah A Nickerson; Heather C Mefford; Dan Doherty; Joshua M Akey; Raphael Bernier; Evan E Eichler; Jay Shendure
Journal:  Science       Date:  2012-11-15       Impact factor: 47.728

7.  Investigating the contribution of common genetic variants to the risk and pathogenesis of ADHD.

Authors:  Evangelia Stergiakouli; Marian Hamshere; Peter Holmans; Kate Langley; Irina Zaharieva; Ziarah Hawi; Lindsey Kent; Michael Gill; Nigel Williams; Michael J Owen; Michael O'Donovan; Anita Thapar
Journal:  Am J Psychiatry       Date:  2012-02       Impact factor: 18.112

8.  GEMINI: integrative exploration of genetic variation and genome annotations.

Authors:  Umadevi Paila; Brad A Chapman; Rory Kirchner; Aaron R Quinlan
Journal:  PLoS Comput Biol       Date:  2013-07-18       Impact factor: 4.475

9.  Exome sequencing in sporadic autism spectrum disorders identifies severe de novo mutations.

Authors:  Brian J O'Roak; Pelagia Deriziotis; Choli Lee; Laura Vives; Jerrod J Schwartz; Santhosh Girirajan; Emre Karakoc; Alexandra P Mackenzie; Sarah B Ng; Carl Baker; Mark J Rieder; Deborah A Nickerson; Raphael Bernier; Simon E Fisher; Jay Shendure; Evan E Eichler
Journal:  Nat Genet       Date:  2011-05-15       Impact factor: 38.330

10.  Refining analyses of copy number variation identifies specific genes associated with developmental delay.

Authors:  Bradley P Coe; Kali Witherspoon; Jill A Rosenfeld; Bregje W M van Bon; Anneke T Vulto-van Silfhout; Paolo Bosco; Kathryn L Friend; Carl Baker; Serafino Buono; Lisenka E L M Vissers; Janneke H Schuurs-Hoeijmakers; Alex Hoischen; Rolph Pfundt; Nik Krumm; Gemma L Carvill; Deana Li; David Amaral; Natasha Brown; Paul J Lockhart; Ingrid E Scheffer; Antonino Alberti; Marie Shaw; Rosa Pettinato; Raymond Tervo; Nicole de Leeuw; Margot R F Reijnders; Beth S Torchia; Hilde Peeters; Brian J O'Roak; Marco Fichera; Jayne Y Hehir-Kwa; Jay Shendure; Heather C Mefford; Eric Haan; Jozef Gécz; Bert B A de Vries; Corrado Romano; Evan E Eichler
Journal:  Nat Genet       Date:  2014-09-14       Impact factor: 38.330

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Authors:  Daniela Navarro; Ani Gasparyan; Francisco Navarrete; Abraham B Torregrosa; Gabriel Rubio; Marta Marín-Mayor; Gabriela B Acosta; Maria Salud Garcia-Gutiérrez; Jorge Manzanares
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Authors:  Jan Buitelaar; Sven Bölte; Daniel Brandeis; Arthur Caye; Nina Christmann; Samuele Cortese; David Coghill; Stephen V Faraone; Barbara Franke; Markus Gleitz; Corina U Greven; Sandra Kooij; Douglas Teixeira Leffa; Nanda Rommelse; Jeffrey H Newcorn; Guilherme V Polanczyk; Luis Augusto Rohde; Emily Simonoff; Mark Stein; Benedetto Vitiello; Yanki Yazgan; Michael Roesler; Manfred Doepfner; Tobias Banaschewski
Journal:  Front Behav Neurosci       Date:  2022-07-06       Impact factor: 3.617

3.  Sibling Recurrence Risk and Cross-aggregation of Attention-Deficit/Hyperactivity Disorder and Autism Spectrum Disorder.

Authors:  Meghan Miller; Erica D Musser; Gregory S Young; Brent Olson; Robert D Steiner; Joel T Nigg
Journal:  JAMA Pediatr       Date:  2019-02-01       Impact factor: 16.193

4.  Narrowing the Genetic Causes of Language Dysfunction in the 1q21.1 Microduplication Syndrome.

Authors:  Antonio Benítez-Burraco; Montserrat Barcos-Martínez; Isabel Espejo-Portero; Maite Fernández-Urquiza; Raúl Torres-Ruiz; Sandra Rodríguez-Perales; Ma Salud Jiménez-Romero
Journal:  Front Pediatr       Date:  2018-06-05       Impact factor: 3.418

5.  Citalopram-induced pathways regulation and tentative treatment-outcome-predicting biomarkers in lymphoblastoid cell lines from depression patients.

Authors:  Abdul Karim Barakat; Catharina Scholl; Michael Steffens; Kerstin Brandenburg; Marcus Ising; Susanne Lucae; Florian Holsboer; Gonzalo Laje; Ganna V Kalayda; Ulrich Jaehde; Julia Carolin Stingl
Journal:  Transl Psychiatry       Date:  2020-07-01       Impact factor: 6.222

6.  Integrated Analysis of Brain Transcriptome Reveals Convergent Molecular Pathways in Autism Spectrum Disorder.

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Journal:  Front Psychiatry       Date:  2019-10-08       Impact factor: 4.157

7.  From man to fly - convergent evidence links FBXO25 to ADHD and comorbid psychiatric phenotypes.

Authors:  Benjamin Harich; Marieke Klein; Charlotte W Ockeloen; Monique van der Voet; Marlies Schimmel-Naber; Nicole de Leeuw; Annette Schenck; Barbara Franke
Journal:  J Child Psychol Psychiatry       Date:  2019-12-17       Impact factor: 8.982

Review 8.  Genetics of attention deficit hyperactivity disorder.

Authors:  Stephen V Faraone; Henrik Larsson
Journal:  Mol Psychiatry       Date:  2018-06-11       Impact factor: 15.992

9.  Differences in the importance of microcephaly, dysmorphism, and epilepsy in the detection of pathogenic CNVs in ID and ASD patients.

Authors:  Zuzana Capkova; Pavlina Capkova; Josef Srovnal; Katerina Staffova; Vera Becvarova; Marie Trkova; Katerina Adamova; Alena Santava; Vaclava Curtisova; Marian Hajduch; Martin Prochazka
Journal:  PeerJ       Date:  2019-11-15       Impact factor: 2.984

10.  Whole exome sequencing in ADHD trios from single and multi-incident families implicates new candidate genes and highlights polygenic transmission.

Authors:  Bashayer R Al-Mubarak; Aisha Omar; Batoul Baz; Basma Al-Abdulaziz; Amna I Magrashi; Eman Al-Yemni; Amjad Jabaan; Dorota Monies; Mohamed Abouelhoda; Dejene Abebe; Mohammad Ghaziuddin; Nada A Al-Tassan
Journal:  Eur J Hum Genet       Date:  2020-04-01       Impact factor: 5.351

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