| Literature DB >> 28330119 |
Shivani Uniyal1, Rashmi Paliwal2, R K Sharma3, J P N Rai2.
Abstract
Fipronil is a widely used insecticide in agriculture and can cause potential health hazards to non-target soil invertebrates and nearby aquatic systems. In the present study, a fipronil degrading bacterium was isolated from fipronil contaminated soil, i.e. rhizospheric zone of Zea mays. Morphological, biochemical and molecular characterization of strain indicated that it clearly belongs to Stenotrophomonas acidaminiphila (accession no. KJ396942). A three-factor Box-Behnken experimental design combined with response surface modeling was employed to predict the optimum conditions for fipronil degradation. The optimum pH, temperature and total inocula biomass for the degradation of fipronil were 7.5, 35 °C and 0.175 g L-1, respectively. The bacterial strain was able to metabolize 25 mg L-1 fipronil with 86.14 % degradation in Dorn's broth medium under optimum conditions. Metabolites formed as a result of fipronil degradation were characterized with gas liquid chromatograph. A novel fipronil degradation pathway was proposed for S. acidaminiphila on the basis of metabolites formed. Non-sterilized soil inoculated with S. acidaminiphila was found to follow first order kinetics with a rate constant of 0.046 d-1. Fipronil sulfone, sulfide and amide were formed as the metabolites and were degraded below the quantifiable limit after 90 days of time period. Given the high fipronil degradation observed in the present study, S. acidaminiphila may have potential for use in bioremediation of fipronil contaminated soils.Entities:
Keywords: Bioremediation; Box–Behnken design; Fipronil; Soil; Stenotrophomonas acidaminiphila
Year: 2016 PMID: 28330119 PMCID: PMC4746198 DOI: 10.1007/s13205-015-0354-x
Source DB: PubMed Journal: 3 Biotech ISSN: 2190-5738 Impact factor: 2.406
Biochemical characteristics for fipronil degrading soil isolate S1
| Characteristics |
|
|---|---|
| Morphological | |
| Colony color | Pale yellow |
| Gram nature | − |
| Cell morphology | Rod |
| Biochemical test | |
| H2S production | + |
| Urea | − |
| Oxidase | + |
| Catalase | + |
| Phenylalanine deamination | − |
| Nitrate reduction | − |
| Lysine | + |
| Ornithine | + |
| Utilization of C-Sources | |
| | + |
| | + |
| Mannose | + |
| Adonitol | − |
| Arabinose | + |
| Citrate | − |
| Lactose | − |
| Sorbitol | − |
+ positive, − negative
Fig. 1Phylogenetic tree of strain S1 constructed by the neighbor-joining method based on nucleotide sequences of the partial 16S rRNA genes. The number at the nodes represents percentage bootstrap value of 1000 replicates
Fig. 2Growth of bacterial strain S1 in Dorn’s broth medium supplemented with fipronil (25 mg L−1) as a sole carbon source. Error bars represent the standard deviation within 5 % of the mean
Fipronil degradation by bacteria in soil
| Bacteria employed | Initial dose | Time taken to achieve fipronil degradation below detectable limit (days) | Reference |
|---|---|---|---|
|
| 50.0 mg kg−1 | 90 | Present study |
|
| 1.5 mg kg−1 | 35 | Mandal et al. ( |
|
| 1.5 mg kg−1 | 35 | Mandal et al. ( |
|
| 80.0 µg kg−1 | 60 | Kumar et al. ( |
Box–Behnken design matrix along with the experimental and predicted values of fipronil degradation
| Factor 1 | Factor 2 | Factor 3 | Predicted response | Experimental response | |
|---|---|---|---|---|---|
| Run | A:X1 | B:X2 | C:X3 | R1 | R2 |
| °C | pH | g/l | Percent degradation | Percent degradation | |
| 1 | 35 | 10.0 | 0.100 | 46.90 | 51.20 |
| 2 | 45 | 5.0 | 0.175 | 37.30 | 38.14 |
| 3 | 45 | 7.5 | 0.250 | 56.50 | 57.50 |
| 4 | 35 | 5.0 | 0.250 | 78.80 | 80.17 |
| 5 | 45 | 7.5 | 0.100 | 44.16 | 44.29 |
| 6 | 35 | 10.0 | 0.250 | 57.10 | 57.96 |
| 7 | 35 | 7.5 | 0.175 | 82.70 | 83.88 |
| 8 | 35 | 7.5 | 0.175 | 83.00 | 85.21 |
| 9 | 35 | 7.5 | 0.175 | 85.30 | 86.14 |
| 10 | 25 | 5.0 | 0.175 | 30.80 | 31.76 |
| 11 | 25 | 7.5 | 0.100 | 56.20 | 56.56 |
| 12 | 25 | 10.0 | 0.175 | 30.60 | 31.50 |
| 13 | 25 | 7.5 | 0.250 | 72.20 | 73.89 |
| 14 | 35 | 5.0 | 0.100 | 50.60 | 52.30 |
| 15 | 45 | 10.0 | 0.175 | 0 | 0 |
ANOVA for response surface quadratic model for fipronil degradation
| Source | Sum of squares | df | Mean square |
|
| Remarks |
|---|---|---|---|---|---|---|
| Model | 8013.8800 | 9 | 890.4311 | 121.4625 | <0.0001 | Significant |
| A-X1 | 335.9232 | 1 | 335.9232 | 45.8228 | 0.0011 | |
| B-X2 | 494.5513 | 1 | 494.5513 | 67.4610 | 0.0004 | |
| C-X3 | 556.7785 | 1 | 556.7785 | 75.9494 | 0.0003 | |
| AB | 344.1025 | 1 | 344.1025 | 46.9386 | 0.0010 | |
| AC | 3.3489 | 1 | 3.3489 | 0.45682 | 0.5291 | |
| BC | 81.0000 | 1 | 81.0000 | 11.0491 | 0.0209 | |
| A2 | 3331.5750 | 1 | 3331.5750 | 454.4556 | <0.0001 | |
| B2 | 3095.2450 | 1 | 3095.2450 | 422.2182 | <0.0001 | |
| C2 | 48.8320 | 1 | 48.8320 | 6.6611 | 0.0494 | |
| Residual | 36.6546 | 5 | 7.3309 | |||
| Lack of fit | 32.6079 | 3 | 10.8693 | 5.3720 | 0.1609 | Not significant |
| Pure error | 4.0467 | 2 | 2.0233 | |||
| Cor total | 8050.5350 | 14 |
df degrees of freedom
Fig. 3Response surface curves described by the model Y, which represents the effect of interactions between a temperature (X ) and pH (X ) b total biomass inocula (X ) and temperature (X ) c total biomass inocula (X3) and pH (X2) on fipronil degradation
Fig. 4Metabolic pathway for fipronil degradation by S. acidaminiphila
Fig. 5Degradation dynamics of fipronil in non-sterilized soils. Error bars represent the standard deviation within 5 % of the mean
Fig. 6Residues of metabolites (mg kg−1) of fipronil degradation in non-sterilized soil inoculated with strain S1 (bar) and non-sterilized control (line) fortified with 50 mg kg−1 fipronil. Error bars represent the standard deviation within 5 % of the mean