Literature DB >> 28329682

The SWI/SNF Protein PBRM1 Restrains VHL-Loss-Driven Clear Cell Renal Cell Carcinoma.

Amrita M Nargund1, Can G Pham1, Yiyu Dong1, Patricia I Wang1, Hatice U Osmangeyoglu2, Yuchen Xie3, Omer Aras4, Song Han1, Toshinao Oyama1, Shugaku Takeda1, Chelsea E Ray1, Zhenghong Dong1, Mathieu Berge1, A Ari Hakimi5, Sebastien Monette6, Carl L Lekaye7, Jason A Koutcher8, Christina S Leslie2, Chad J Creighton9, Nils Weinhold10, William Lee10, Satish K Tickoo11, Zhong Wang12, Emily H Cheng13, James J Hsieh14.   

Abstract

PBRM1 is the second most commonly mutated gene after VHL in clear cell renal cell carcinoma (ccRCC). However, the biological consequences of PBRM1 mutations for kidney tumorigenesis are unknown. Here, we find that kidney-specific deletion of Vhl and Pbrm1, but not either gene alone, results in bilateral, multifocal, transplantable clear cell kidney cancers. PBRM1 loss amplified the transcriptional outputs of HIF1 and STAT3 incurred by Vhl deficiency. Analysis of mouse and human ccRCC revealed convergence on mTOR activation, representing the third driver event after genetic inactivation of VHL and PBRM1. Our study reports a physiological preclinical ccRCC mouse model that recapitulates somatic mutations in human ccRCC and provides mechanistic and therapeutic insights into PBRM1 mutated subtypes of human ccRCC.
Copyright © 2017 The Author(s). Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  HIF1; MTOR; PBRM1; STAT3; VHL; ccRCC; epigenetics; genetics; kidney cancer; mouse tumor model

Mesh:

Substances:

Year:  2017        PMID: 28329682      PMCID: PMC5431084          DOI: 10.1016/j.celrep.2017.02.074

Source DB:  PubMed          Journal:  Cell Rep            Impact factor:   9.423


  63 in total

1.  Polybromo protein BAF180 functions in mammalian cardiac chamber maturation.

Authors:  Zhong Wang; Weiguo Zhai; James A Richardson; Eric N Olson; Juanito J Meneses; Meri T Firpo; Chulho Kang; William C Skarnes; Robert Tjian
Journal:  Genes Dev       Date:  2004-12-15       Impact factor: 11.361

2.  Clinical and pathologic impact of select chromatin-modulating tumor suppressors in clear cell renal cell carcinoma.

Authors:  A Ari Hakimi; Ying-Bei Chen; James Wren; Mithat Gonen; Omar Abdel-Wahab; Adriana Heguy; Han Liu; Shugaku Takeda; Satish K Tickoo; Victor E Reuter; Martin H Voss; Robert J Motzer; Jonathan A Coleman; Emily H Cheng; Paul Russo; James J Hsieh
Journal:  Eur Urol       Date:  2012-09-27       Impact factor: 20.096

3.  A clear picture of renal cell carcinoma.

Authors:  A Ari Hakimi; Can G Pham; James J Hsieh
Journal:  Nat Genet       Date:  2013-08       Impact factor: 38.330

4.  Proteasome inhibitors evoke latent tumor suppression programs in pro-B MLL leukemias through MLL-AF4.

Authors:  Han Liu; Todd D Westergard; Amanda Cashen; David R Piwnica-Worms; Lori Kunkle; Ravi Vij; Can G Pham; John DiPersio; Emily H Cheng; James J Hsieh
Journal:  Cancer Cell       Date:  2014-04-14       Impact factor: 31.743

5.  An Integrated Metabolic Atlas of Clear Cell Renal Cell Carcinoma.

Authors:  A Ari Hakimi; Ed Reznik; Chung-Han Lee; Chad J Creighton; A Rose Brannon; Augustin Luna; B Arman Aksoy; Eric Minwei Liu; Ronglai Shen; William Lee; Yang Chen; Steve M Stirdivant; Paul Russo; Ying Bei Chen; Satish K Tickoo; Victor E Reuter; Emily H Cheng; Chris Sander; James J Hsieh
Journal:  Cancer Cell       Date:  2016-01-11       Impact factor: 31.743

6.  Proteomic and bioinformatic analysis of mammalian SWI/SNF complexes identifies extensive roles in human malignancy.

Authors:  Cigall Kadoch; Diana C Hargreaves; Courtney Hodges; Laura Elias; Lena Ho; Jeff Ranish; Gerald R Crabtree
Journal:  Nat Genet       Date:  2013-05-05       Impact factor: 38.330

7.  Regulation of mTOR function in response to hypoxia by REDD1 and the TSC1/TSC2 tumor suppressor complex.

Authors:  James Brugarolas; Kui Lei; Rebecca L Hurley; Brendan D Manning; Jan H Reiling; Ernst Hafen; Lee A Witters; Leif W Ellisen; William G Kaelin
Journal:  Genes Dev       Date:  2004-11-15       Impact factor: 11.361

8.  Renal cyst formation in Fh1-deficient mice is independent of the Hif/Phd pathway: roles for fumarate in KEAP1 succination and Nrf2 signaling.

Authors:  Julie Adam; Emine Hatipoglu; Linda O'Flaherty; Nicola Ternette; Natasha Sahgal; Helen Lockstone; Dilair Baban; Emma Nye; Gordon W Stamp; Kathryn Wolhuter; Marcus Stevens; Roman Fischer; Peter Carmeliet; Patrick H Maxwell; Chris W Pugh; Norma Frizzell; Tomoyoshi Soga; Benedikt M Kessler; Mona El-Bahrawy; Peter J Ratcliffe; Patrick J Pollard
Journal:  Cancer Cell       Date:  2011-10-18       Impact factor: 38.585

9.  BAP1 loss defines a new class of renal cell carcinoma.

Authors:  Samuel Peña-Llopis; Silvia Vega-Rubín-de-Celis; Arnold Liao; Nan Leng; Andrea Pavía-Jiménez; Shanshan Wang; Toshinari Yamasaki; Leah Zhrebker; Sharanya Sivanand; Patrick Spence; Lisa Kinch; Tina Hambuch; Suneer Jain; Yair Lotan; Vitaly Margulis; Arthur I Sagalowsky; Pia Banerji Summerour; Wareef Kabbani; S W Wendy Wong; Nick Grishin; Marc Laurent; Xian-Jin Xie; Christian D Haudenschild; Mark T Ross; David R Bentley; Payal Kapur; James Brugarolas
Journal:  Nat Genet       Date:  2012-06-10       Impact factor: 38.330

10.  Development of synchronous VHL syndrome tumors reveals contingencies and constraints to tumor evolution.

Authors:  Rosalie Fisher; Stuart Horswell; Andrew Rowan; Maximilian P Salm; Elza C de Bruin; Sakshi Gulati; Nicholas McGranahan; Mark Stares; Marco Gerlinger; Ignacio Varela; Andrew Crockford; Francesco Favero; Virginie Quidville; Fabrice André; Carolina Navas; Eva Grönroos; David Nicol; Steve Hazell; David Hrouda; Tim O'Brien; Nik Matthews; Ben Phillimore; Sharmin Begum; Adam Rabinowitz; Jennifer Biggs; Paul A Bates; Neil Q McDonald; Gordon Stamp; Bradley Spencer-Dene; James J Hsieh; Jianing Xu; Lisa Pickering; Martin Gore; James Larkin; Charles Swanton
Journal:  Genome Biol       Date:  2014-08-27       Impact factor: 13.583

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  78 in total

1.  Transcriptomic Profiling of the Tumor Microenvironment Reveals Distinct Subgroups of Clear Cell Renal Cell Cancer: Data from a Randomized Phase III Trial.

Authors:  A Ari Hakimi; Martin H Voss; Fengshen Kuo; Alejandro Sanchez; Ming Liu; Briana G Nixon; Lynda Vuong; Irina Ostrovnaya; Ying-Bei Chen; Victor Reuter; Nadeem Riaz; Yuan Cheng; Parul Patel; Mahtab Marker; Albert Reising; Ming O Li; Timothy A Chan; Robert J Motzer
Journal:  Cancer Discov       Date:  2019-01-08       Impact factor: 39.397

2.  ARID1A knockdown triggers epithelial-mesenchymal transition and carcinogenesis features of renal cells: role in renal cell carcinoma.

Authors:  Keerakarn Somsuan; Paleerath Peerapen; Wanida Boonmark; Sirikanya Plumworasawat; Ratirath Samol; Natthiya Sakulsak; Visith Thongboonkerd
Journal:  FASEB J       Date:  2019-08-21       Impact factor: 5.191

3.  Genomic correlates of response to immune checkpoint therapies in clear cell renal cell carcinoma.

Authors:  Diana Miao; Claire A Margolis; Wenhua Gao; Martin H Voss; Wei Li; Dylan J Martini; Craig Norton; Dominick Bossé; Stephanie M Wankowicz; Dana Cullen; Christine Horak; Megan Wind-Rotolo; Adam Tracy; Marios Giannakis; Frank Stephen Hodi; Charles G Drake; Mark W Ball; Mohamad E Allaf; Alexandra Snyder; Matthew D Hellmann; Thai Ho; Robert J Motzer; Sabina Signoretti; William G Kaelin; Toni K Choueiri; Eliezer M Van Allen
Journal:  Science       Date:  2018-01-04       Impact factor: 47.728

4.  Modeling Renal Cell Carcinoma in Mice: Bap1 and Pbrm1 Inactivation Drive Tumor Grade.

Authors:  Yi-Feng Gu; Shannon Cohn; Alana Christie; Tiffani McKenzie; Nicholas Wolff; Quyen N Do; Ananth J Madhuranthakam; Ivan Pedrosa; Tao Wang; Anwesha Dey; Meinrad Busslinger; Xian-Jin Xie; Robert E Hammer; Renée M McKay; Payal Kapur; James Brugarolas
Journal:  Cancer Discov       Date:  2017-05-04       Impact factor: 39.397

5.  The core SWI/SNF catalytic subunit Brg1 regulates nephron progenitor cell proliferation and differentiation.

Authors:  Jeannine M Basta; Ajeet P Singh; Lynn Robbins; Lisa Stout; Michelle Pherson; Michael Rauchman
Journal:  Dev Biol       Date:  2020-06-03       Impact factor: 3.582

6.  SWI/SNF tumor suppressor gene PBRM1/BAF180 in human clear cell kidney cancer.

Authors:  Amrita M Nargund; Hatice U Osmanbeyoglu; Emily H Cheng; James J Hsieh
Journal:  Mol Cell Oncol       Date:  2017-06-19

7.  Targeting the Mevalonate Pathway Suppresses VHL-Deficient CC-RCC through an HIF-Dependent Mechanism.

Authors:  Jordan M Thompson; Alejandro Alvarez; Monika K Singha; Matthew W Pavesic; Quy H Nguyen; Luke J Nelson; David A Fruman; Olga V Razorenova
Journal:  Mol Cancer Ther       Date:  2018-05-02       Impact factor: 6.261

8.  Arginase 2 Suppresses Renal Carcinoma Progression via Biosynthetic Cofactor Pyridoxal Phosphate Depletion and Increased Polyamine Toxicity.

Authors:  Joshua D Ochocki; Sanika Khare; Markus Hess; Daniel Ackerman; Bo Qiu; Jennie I Daisak; Andrew J Worth; Nan Lin; Pearl Lee; Hong Xie; Bo Li; Bradley Wubbenhorst; Tobi G Maguire; Katherine L Nathanson; James C Alwine; Ian A Blair; Itzhak Nissim; Brian Keith; M Celeste Simon
Journal:  Cell Metab       Date:  2018-05-10       Impact factor: 27.287

Review 9.  Choosing The Right Animal Model for Renal Cancer Research.

Authors:  Paweł Sobczuk; Anna Brodziak; Mohammed Imran Khan; Stuti Chhabra; Michał Fiedorowicz; Marlena Wełniak-Kamińska; Kamil Synoradzki; Ewa Bartnik; Agnieszka Cudnoch-Jędrzejewska; Anna M Czarnecka
Journal:  Transl Oncol       Date:  2020-02-22       Impact factor: 4.243

10.  A novel EZH2 inhibitor induces synthetic lethality and apoptosis in PBRM1-deficient cancer cells.

Authors:  Kejia Huang; Rong Sun; Jiarong Chen; Qianye Yang; Yucheng Wang; Yang Zhang; Kun Xie; Tiantian Zhang; Rui Li; Qi Zhao; Liang Zou; Jian Li
Journal:  Cell Cycle       Date:  2020-02-24       Impact factor: 4.534

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