Literature DB >> 28328203

Physical Molecular Mechanics Method for Damped Dispersion.

Pragya Verma1, Bo Wang1, Laura E Fernandez1, Donald G Truhlar1.   

Abstract

Damped dispersion can be a significant component of the interaction energy in many physical and chemical processes, for example, physisorption and noncovalent complexation. For physically interpreting and modeling such processes, it is convenient to have an analytic method to calculate damped dispersion that is readily applicable across the entire periodic table. Of the available methods to calculate damped dispersion energy for interacting systems with overlapping charge distributions, we select symmetry-adapted perturbation theory (SAPT) as providing a reasonable definition, and of the possible analytic forms, we choose the D3(BJ) method. However, the available parametrizations of D3(BJ) include not only damped dispersion energy but also corrections for errors in specific exchange-correlation functionals. Here we present a parametrization that provides a physical measure of damped dispersion without such density functional corrections. The method generalizes an earlier method of Pernal and co-workers to all elements from hydrogen to plutonium.

Entities:  

Year:  2017        PMID: 28328203     DOI: 10.1021/acs.jpca.7b02384

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  3 in total

1.  A physically grounded damped dispersion model with particle mesh Ewald summation.

Authors:  Joshua A Rackers; Chengwen Liu; Pengyu Ren; Jay W Ponder
Journal:  J Chem Phys       Date:  2018-08-28       Impact factor: 3.488

2.  Polarizable Water Potential Derived from a Model Electron Density.

Authors:  Joshua A Rackers; Roseane R Silva; Zhi Wang; Jay W Ponder
Journal:  J Chem Theory Comput       Date:  2021-10-26       Impact factor: 6.006

3.  Extension of an Atom-Atom Dispersion Function to Halogen Bonds and Its Use for Rational Design of Drugs and Biocatalysts.

Authors:  Wiktoria Jedwabny; Edyta Dyguda-Kazimierowicz; Katarzyna Pernal; Krzysztof Szalewicz; Konrad Patkowski
Journal:  J Phys Chem A       Date:  2021-02-23       Impact factor: 2.781

  3 in total

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