Literature DB >> 2832390

Restriction analysis and quantitative estimation of methylated bases of filamentous and unicellular cyanobacterial DNAs.

R N Padhy1, F G Hottat, M M Coene, P P Hoet.   

Abstract

The DNAs of strains of three cyanobacterial genera (Anabaena, Plectonema, and Synechococcus) were found to be partially or fully resistant to many restriction endonucleases. This could be due to the absence of specific sequences or to modifications, rendering given sequences resistant to cleavage. The latter explanation is substantiated by the content of N6-methyladenine and 5-methylcytosine in these genomes, which is high in comparison with that in other bacterial genomes. dcm- and dam-like methylases are present in the three strains (based on the restriction patterns obtained with the appropriate isoschizomeric enzymes). Their contribution to the overall content of methyladenine and methylcytosine in the genomes was calculated. Partial methylation of GATC sequences was observed in Anabaena DNA. In addition, the GATC methylation patterns might not have been random in the three cyanobacterial DNA preparations, as revealed by the appearance of discrete fragments (possibly of plasmid origin) withstanding cleavage by DpnI (which requires the presence of methyladenine in the GATC sequence).

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Year:  1988        PMID: 2832390      PMCID: PMC211053          DOI: 10.1128/jb.170.4.1934-1939.1988

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  31 in total

1.  Two sequence-specific endonucleases from Anabaena oscillariodes.

Authors:  A de Waard; C P van Beveren; M Duyvesteyn; H van Ormondt
Journal:  FEBS Lett       Date:  1979-05-01       Impact factor: 4.124

2.  Survey of extrachromosomal DNA found in the filamentous cyanobacteria.

Authors:  R D Simon
Journal:  J Bacteriol       Date:  1978-10       Impact factor: 3.490

3.  Covalently closed circular DNAs in closely related unicellular cyanobacteria.

Authors:  R H Lau; W F Doolittle
Journal:  J Bacteriol       Date:  1979-01       Impact factor: 3.490

4.  Complementary specificity of restriction endonucleases of Diplococcus pneumoniae with respect to DNA methylation.

Authors:  S Lacks; B Greenberg
Journal:  J Mol Biol       Date:  1977-07       Impact factor: 5.469

5.  Modification profiles of bacterial genomes.

Authors:  J E Brooks; R J Roberts
Journal:  Nucleic Acids Res       Date:  1982-02-11       Impact factor: 16.971

6.  Studies on the biological role of dna methylation; IV. Mode of methylation of DNA in E. coli cells.

Authors:  A Razin; S Urieli; Y Pollack; Y Gruenbaum; G Glaser
Journal:  Nucleic Acids Res       Date:  1980-04-25       Impact factor: 16.971

7.  A physical map of plasmid pDU1 from the cyanobacterium Nostoc PCC 7524.

Authors:  J Reaston; C A van den Hondel; G A van Arkel; W D Stewart
Journal:  Plasmid       Date:  1982-01       Impact factor: 3.466

8.  Cyanobacterial plasmids: their widespread occurrence, and the existence of regions of homology between plasmids in the same and different species.

Authors:  R H Lau; C Sapienza; W F Doolittle
Journal:  Mol Gen Genet       Date:  1980-04

9.  Sequence specificity of the wild-type dam+) and mutant (damh) forms of bacteriophage T2 DNA adenine methylase.

Authors:  S Hattman; H van Ormondt; A de Waard
Journal:  J Mol Biol       Date:  1978-03-05       Impact factor: 5.469

10.  The blue-green alga agmenellum quadruplicatum contains covalently closed DNA circles.

Authors:  T M Roberts; K E Koths
Journal:  Cell       Date:  1976-12       Impact factor: 41.582

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  14 in total

1.  Characterization of the IS895 family of insertion sequences from the cyanobacterium Anabaena sp. strain PCC 7120.

Authors:  J Alam; J M Vrba; Y Cai; J A Martin; L J Weislo; S E Curtis
Journal:  J Bacteriol       Date:  1991-09       Impact factor: 3.490

2.  Genetic variation at theapcAB,cpcAB,gvpA1, andnifH loci and in DNA methylation among N2-fixing cyanobacteria designatedNostoc punctiforme.

Authors:  W J Zimmerman; D E Culley
Journal:  Microb Ecol       Date:  1991-12       Impact factor: 4.552

3.  Physical and genetic maps of the genome of the heterocyst-forming cyanobacterium Anabaena sp. strain PCC 7120.

Authors:  I Bancroft; C P Wolk; E V Oren
Journal:  J Bacteriol       Date:  1989-11       Impact factor: 3.490

4.  Diversity of DNA methylation pattern and total DNA restriction pattern in symbiotic Nostoc.

Authors:  F Lotti; L Giovannetti; M C Margheri; S Ventura; R Materassi
Journal:  World J Microbiol Biotechnol       Date:  1996-01       Impact factor: 3.312

5.  Deletion of a 55-kilobase-pair DNA element from the chromosome during heterocyst differentiation of Anabaena sp. strain PCC 7120.

Authors:  J W Golden; C D Carrasco; M E Mulligan; G J Schneider; R Haselkorn
Journal:  J Bacteriol       Date:  1988-11       Impact factor: 3.490

6.  Genetic diversity and phylogeny of toxic cyanobacteria determined by DNA polymorphisms within the phycocyanin locus.

Authors:  B A Neilan; D Jacobs; A E Goodman
Journal:  Appl Environ Microbiol       Date:  1995-11       Impact factor: 4.792

7.  HcwA, an autolysin, is required for heterocyst maturation in Anabaena sp. strain PCC 7120.

Authors:  J Zhu; K Jäger; T Black; K Zarka; O Koksharova; C P Wolk
Journal:  J Bacteriol       Date:  2001-12       Impact factor: 3.490

8.  Use of a transposon with luciferase as a reporter to identify environmentally responsive genes in a cyanobacterium.

Authors:  C P Wolk; Y Cai; J M Panoff
Journal:  Proc Natl Acad Sci U S A       Date:  1991-06-15       Impact factor: 11.205

9.  Characterization of insertion sequence IS892 and related elements from the cyanobacterium Anabaena sp. strain PCC 7120.

Authors:  Y Cai
Journal:  J Bacteriol       Date:  1991-09       Impact factor: 3.490

10.  Unique modification of adenine in genomic DNA of the marine cyanobacterium Trichodesmium sp. strain NIBB 1067.

Authors:  J P Zehr; K Ohki; Y Fujita; D Landry
Journal:  J Bacteriol       Date:  1991-11       Impact factor: 3.490

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